RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 CITED1Q99966 193 aa13.72□□□□□ -0.21
CCDC7-203ENST00000362006 TCEAL7Q9BRU2 100 aa13.72□□□□□ -0.21
CCDC7-203ENST00000362006 SMAD5-AS1Q9Y6J3 95 aa13.72□□□□□ -0.21
CCDC7-203ENST00000362006 F6UZH7 168 aa13.71□□□□□ -0.21
CCDC7-203ENST00000362006 CBLN1P23435 193 aa13.71□□□□□ -0.21
CCDC7-203ENST00000362006 CD81P60033 236 aa13.71□□□□□ -0.21
CCDC7-203ENST00000362006 PSG9Q00887 426 aa13.71□□□□□ -0.21
CCDC7-203ENST00000362006 TMEM250H0YL14 139 aa13.7□□□□□ -0.22
CCDC7-203ENST00000362006 SRP19P09132 144 aaKnown RBP13.7□□□□□ -0.22
CCDC7-203ENST00000362006 RANP62826 216 aaKnown RBP13.7□□□□□ -0.22
CCDC7-203ENST00000362006 OTORQ9NRC9 128 aa13.7□□□□□ -0.22
CCDC7-203ENST00000362006 TMEM218A2RU14 115 aa13.7□□□□□ -0.22
CCDC7-203ENST00000362006 KRBOX1C9JBD0 128 aa13.7□□□□□ -0.22
CCDC7-203ENST00000362006 ATP6V1G1O75348 118 aa13.7□□□□□ -0.22
CCDC7-203ENST00000362006 ATP5G3P48201 142 aa13.7□□□□□ -0.22
CCDC7-203ENST00000362006 SUMO1P63165 101 aaKnown RBP13.7□□□□□ -0.22
CCDC7-203ENST00000362006 CCDC28AQ8IWP9 274 aa13.7□□□□□ -0.22
CCDC7-203ENST00000362006 FOLR2P14207 255 aa13.69□□□□□ -0.22
CCDC7-203ENST00000362006 SLC50A1Q9BRV3 221 aa13.69□□□□□ -0.22
CCDC7-203ENST00000362006 C9JQL5 133 aa13.69□□□□□ -0.22
CCDC7-203ENST00000362006 OVOL1O14753 267 aa13.69□□□□□ -0.22
CCDC7-203ENST00000362006 NDUFB4O95168 129 aa13.69□□□□□ -0.22
CCDC7-203ENST00000362006 TMEM158Q8WZ71 300 aa13.69□□□□□ -0.22
CCDC7-203ENST00000362006 Q9H3A6 140 aa13.69□□□□□ -0.22
CCDC7-203ENST00000362006 AAMDCQ9H7C9 122 aa13.69□□□□□ -0.22
CCDC7-203ENST00000362006 CLEC5AQ9NY25 188 aa13.69□□□□□ -0.22
CCDC7-203ENST00000362006 PGPA6NDG6 321 aa13.68□□□□□ -0.22
CCDC7-203ENST00000362006 GGTLC3B5MD39 225 aa13.68□□□□□ -0.22
CCDC7-203ENST00000362006 SNRPCP09234 159 aaKnown RBP13.68□□□□□ -0.22
CCDC7-203ENST00000362006 SFTA3P0C7M3 94 aa13.68□□□□□ -0.22
CCDC7-203ENST00000362006 S100A1P23297 94 aa13.68□□□□□ -0.22
CCDC7-203ENST00000362006 SAMD13Q5VXD3 122 aa13.68□□□□□ -0.22
CCDC7-203ENST00000362006 C17orf77Q96MU5 243 aa13.68□□□□□ -0.22
CCDC7-203ENST00000362006 H3BTX0 84 aa13.67□□□□□ -0.22
CCDC7-203ENST00000362006 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.67□□□□□ -0.22
CCDC7-203ENST00000362006 TCF24Q7RTU0 167 aa13.67□□□□□ -0.22
CCDC7-203ENST00000362006 SIGLEC8Q9NYZ4 499 aa13.67□□□□□ -0.22
CCDC7-203ENST00000362006 ARL6IP6Q8N6S5 226 aa13.67□□□□□ -0.22
CCDC7-203ENST00000362006 C5orf17Q8NAS9 161 aa13.67□□□□□ -0.22
CCDC7-203ENST00000362006 RPUSD4Q96CM3 377 aaKnown RBP13.67□□□□□ -0.22
CCDC7-203ENST00000362006 CSN3P07498 182 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 RPL11P62913 178 aaKnown RBP13.66□□□□□ -0.22
CCDC7-203ENST00000362006 SOHLH1Q5JUK2 328 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 CYB561D1Q8N8Q1 229 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 HIST1H2BAQ96A08 127 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 C11orf52Q96A22 123 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 NRN1Q9NPD7 142 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 ZNF331Q9NQX6 463 aaPredicted RBP13.66□□□□□ -0.22
CCDC7-203ENST00000362006 PF4P02776 101 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 SLC25A5P05141 298 aaKnown RBP13.66□□□□□ -0.22
CCDC7-203ENST00000362006 FAM90A2PQ658T7 463 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 CMTM2Q8TAZ6 248 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 ZNF747Q9BV97 191 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 SEC11CQ9BY50 192 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 PRELID1Q9Y255 219 aa13.66□□□□□ -0.22
CCDC7-203ENST00000362006 SLC17A3O00476 420 aa13.65□□□□□ -0.22
CCDC7-203ENST00000362006 EDN2P20800 178 aa13.65□□□□□ -0.22
CCDC7-203ENST00000362006 EPDR1Q9UM22 224 aa13.65□□□□□ -0.22
CCDC7-203ENST00000362006 F8W036 122 aa13.64□□□□□ -0.23
CCDC7-203ENST00000362006 FAM74A3Q4VXF1 159 aa13.64□□□□□ -0.23
CCDC7-203ENST00000362006 ADAMTSL5Q6ZMM2 481 aa13.64□□□□□ -0.23
CCDC7-203ENST00000362006 EXOC3-AS1Q8N2X6 119 aa13.64□□□□□ -0.23
CCDC7-203ENST00000362006 DYNLRB2Q8TF09 96 aa13.64□□□□□ -0.23
CCDC7-203ENST00000362006 MLXQ9UH92 298 aa13.64□□□□□ -0.23
CCDC7-203ENST00000362006 CSN1S1P47710 185 aa13.63□□□□□ -0.23
CCDC7-203ENST00000362006 CEBPGP53567 150 aa13.63□□□□□ -0.23
CCDC7-203ENST00000362006 C16orf92Q96LL3 132 aa13.63□□□□□ -0.23
CCDC7-203ENST00000362006 ATRQ13535 2644 aa13.63□□□□□ -0.23
CCDC7-203ENST00000362006 SCO2A0A1W2PP80 73 aa13.63□□□□□ -0.23
CCDC7-203ENST00000362006 PAFAH1B2P68402 229 aa13.63□□□□□ -0.23
CCDC7-203ENST00000362006 C10orf91Q5T1B1 145 aa13.63□□□□□ -0.23
CCDC7-203ENST00000362006 C12orf54Q6X4T0 127 aa13.63□□□□□ -0.23
CCDC7-203ENST00000362006 MRPL53Q96EL3 112 aaKnown RBP13.63□□□□□ -0.23
CCDC7-203ENST00000362006 PEX7O00628 323 aa13.62□□□□□ -0.23
CCDC7-203ENST00000362006 C3orf56Q8N813 242 aa13.62□□□□□ -0.23
CCDC7-203ENST00000362006 LINC00052Q96N35 136 aa13.62□□□□□ -0.23
CCDC7-203ENST00000362006 ATG101Q9BSB4 218 aa13.62□□□□□ -0.23
CCDC7-203ENST00000362006 SERTM2A0A1B0GWG4 89 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 ISLRO14498 428 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 S100A9P06702 114 aaKnown RBP13.61□□□□□ -0.23
CCDC7-203ENST00000362006 ID1P41134 155 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 CARHSP1Q9Y2V2 147 aaKnown RBP13.61□□□□□ -0.23
CCDC7-203ENST00000362006 WNK1Q9H4A3 2382 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 TRAV2A0A0B4J234 112 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 TRAV25A0A0B4J276 109 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 K7EQM0 130 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 TCRAP04437 139 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 DEFB114Q30KQ6 69 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 SHISA2Q6UWI4 295 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 RBPMS2Q6ZRY4 209 aaKnown RBP13.61□□□□□ -0.23
CCDC7-203ENST00000362006 LINC00482Q8N8I6 264 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 C2CD4CQ8TF44 421 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 PARLQ9H300 379 aa13.61□□□□□ -0.23
CCDC7-203ENST00000362006 ZNF727A8MUV8 499 aa13.6□□□□□ -0.23
CCDC7-203ENST00000362006 DNASE2O00115 360 aaPredicted RBP13.6□□□□□ -0.23
CCDC7-203ENST00000362006 SOCS3O14543 225 aa13.6□□□□□ -0.23
CCDC7-203ENST00000362006 AKR1C3P42330 323 aa13.6□□□□□ -0.23
CCDC7-203ENST00000362006 CNN1P51911 297 aaKnown RBP13.6□□□□□ -0.23
CCDC7-203ENST00000362006 SMIM7Q9BQ49 75 aa13.6□□□□□ -0.23
CCDC7-203ENST00000362006 MS4A6AQ9H2W1 248 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms