RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 F2Z2F3 143 aa10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 HIST1H1EP10412 219 aaKnown RBP10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 SRIP30626 198 aa10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 KRTDAPP60985 99 aa10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 KRTAP1-1Q07627 177 aa10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 KIAA1644Q3SXP7 199 aa10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 MORN5Q5VZ52 161 aa10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 TMEM219Q86XT9 240 aa10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 SMIM12Q96EX1 92 aa10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 NRN1Q9NPD7 142 aa10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 F11RQ9Y624 299 aaKnown RBP10.35□□□□□ -0.75
SQSTM1-201ENST00000360718 A0A1W2PS18 150 aa10.34□□□□□ -0.75
SQSTM1-201ENST00000360718 DIRC3C9JPN6 131 aa10.34□□□□□ -0.75
SQSTM1-201ENST00000360718 BMPR1BO00238 502 aa10.34□□□□□ -0.75
SQSTM1-201ENST00000360718 PYYP10082 97 aa10.34□□□□□ -0.75
SQSTM1-201ENST00000360718 PATE2Q6UY27 113 aa10.34□□□□□ -0.75
SQSTM1-201ENST00000360718 C19orf35Q6ZS72 473 aa10.34□□□□□ -0.75
SQSTM1-201ENST00000360718 ATG101Q9BSB4 218 aa10.34□□□□□ -0.75
SQSTM1-201ENST00000360718 RPLP1P05386 114 aaKnown RBP10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 UBE2G1P62253 170 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 LINC00305Q7Z4B0 112 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 C5orf56Q8N8D9 126 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 MRPL27Q9P0M9 148 aaKnown RBP10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 FBXL7Q9UJT9 491 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 PAM16Q9Y3D7 125 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 IGKV1D-37A0A075B6S9 117 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 IGHV7-81A0A0B4J1V7 117 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 ZNF324O75467 553 aaPredicted RBP10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 NDPQ00604 133 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 LY6EQ16553 131 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 DEFB112Q30KQ8 113 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 NHLRC2Q8NBF2 726 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 NUDT10Q8NFP7 164 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 BORCS7Q96B45 105 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 FXYD5Q96DB9 178 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 NUDT11Q96G61 164 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 LINC00479Q96M42 142 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 WNT10AQ9GZT5 417 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 TNFRSF19Q9NS68 423 aa10.33□□□□□ -0.76
SQSTM1-201ENST00000360718 ZNF25P17030 456 aaPredicted RBP10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 PMCHP20382 165 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 C9orf139Q6ZV77 190 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 TRGV9Q99603 122 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 EPDR1Q9UM22 224 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 A6NDX4 124 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 SH2D7A6NKC9 451 aaPredicted RBP10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 NPIPB5A8MRT5 1133 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 DLEU1O43261 78 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 MFAP2P55001 183 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 TDRG1Q3Y452 100 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 ANKRD39Q53RE8 183 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 PVRIGQ6DKI7 326 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 TSKUQ8WUA8 353 aa10.32□□□□□ -0.76
SQSTM1-201ENST00000360718 SLC25A5P05141 298 aaKnown RBP10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 CRYGCP07315 174 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 LINC00614P0C842 121 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 ORM2P19652 201 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 G0S2P27469 103 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 IL17RELQ6ZVW7 336 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 ATP5L2Q7Z4Y8 100 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 GOLT1BQ9Y3E0 138 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 TRAV34A0A0B4J273 112 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 PGPA6NDG6 321 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 CA1P00915 261 aaPredicted RBP10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 MYCNOSP40205 109 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 TTC9CQ8N5M4 171 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 NUP35Q8NFH5 326 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 OR1B1Q8NGR6 318 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 TMUB1Q9BVT8 246 aa10.31□□□□□ -0.76
SQSTM1-201ENST00000360718 HYPMO75409 117 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 IGHV3-48P01763 117 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 NBEAP1P0C6P0 100 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 FAM162BQ5T6X4 162 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 GPR82Q96P67 336 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 RCHY1Q96PM5 261 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 TMEM208Q9BTX3 173 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 THYN1Q9P016 225 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 KLF12Q9Y4X4 402 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 KLF5Q13887 457 aaPredicted RBP10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 PRR27Q6MZM9 219 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 UNQ5815/PRO19632Q6UWF5 114 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 TMEM116Q8NCL8 245 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 C18orf32Q8TCD1 76 aa10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 ZNF48Q96MX3 618 aaPredicted RBP10.3□□□□□ -0.76
SQSTM1-201ENST00000360718 LINC01548A6NM66 108 aa10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 ATP6V0E1O15342 81 aa10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 EGR2P11161 476 aaPredicted RBP10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 ANK3Q12955 4377 aaKnown RBP10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 SLAQ13239 276 aa10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 ECSCRQ19T08 205 aa10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 ASPHD1Q5U4P2 390 aa10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 KLHDC1Q8N7A1 406 aa10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 Q8N976 141 aa10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 FMC1Q96HJ9 113 aa10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 MRPL36Q9P0J6 103 aaKnown RBP10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 CBY1Q9Y3M2 126 aa10.29□□□□□ -0.76
SQSTM1-201ENST00000360718 BAHCC1Q9P281 2608 aa10.28□□□□□ -0.76
SQSTM1-201ENST00000360718 CD5LO43866 347 aa10.28□□□□□ -0.76
SQSTM1-201ENST00000360718 HSBP1O75506 76 aa10.28□□□□□ -0.76
SQSTM1-201ENST00000360718 OR2J3O76001 311 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms