RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SLC25A45Q8N413 288 aa7.65□□□□□ -1.19
VPS13A-203ENST00000360280 C20orf144Q9BQM9 153 aa7.65□□□□□ -1.19
VPS13A-203ENST00000360280 KLRD1Q13241 179 aa7.65□□□□□ -1.19
VPS13A-203ENST00000360280 TIMM23O14925 209 aa7.65□□□□□ -1.19
VPS13A-203ENST00000360280 METRNQ9UJH8 293 aa7.65□□□□□ -1.19
VPS13A-203ENST00000360280 FAM231BA6NCW3 169 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 SAP25Q8TEE9 199 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 COL6A6A6NMZ7 2263 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 A0A1B0GWJ7 208 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 ITGBL1O95965 494 aaPredicted RBP7.64□□□□□ -1.19
VPS13A-203ENST00000360280 PRO1854Q9UHT4 67 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 CHKB-CPT1BH3BT56 60 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 SHISA9B4DS77 424 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 GAGE7O76087 117 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 GAGE12FP0CL80 117 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 GAGE12GP0CL81 117 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 GAGE12IP0CL82 117 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 IGHG2P01859 326 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 SMIM10L1P0DMW3 83 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 SMIM10Q96HG1 83 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 CARD19Q96LW7 228 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 ABCA4P78363 2273 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 RHODO00212 210 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 NBL1P41271 181 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 TRBV25-1A0A075B6N4 114 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 TRAV40A0A0B4J280 105 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 K7EP34 96 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 FXYD7P58549 80 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 C2orf16Q68DN1 1984 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 USMG5Q96IX5 58 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 ZNF664Q8N3J9 261 aa7.64□□□□□ -1.19
VPS13A-203ENST00000360280 TNRC6BQ9UPQ9 1833 aaKnown RBP7.63□□□□□ -1.19
VPS13A-203ENST00000360280 TRAV12-1A0A0B4J245 112 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 Q0VG73 95 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 MRPL14Q6P1L8 145 aaKnown RBP7.63□□□□□ -1.19
VPS13A-203ENST00000360280 A0A1W2PPI3 338 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 SRSF2Q01130 221 aaKnown RBP7.63□□□□□ -1.19
VPS13A-203ENST00000360280 J3KT08 172 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 SPATA31B1PQ5VZV4 182 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 PKIGQ9Y2B9 76 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 KIAA1549Q9HCM3 1950 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 GLRX5Q86SX6 157 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 SPATA25Q9BR10 227 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 OOSP1A8MZH6 123 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 IGHV1-2P23083 117 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 BRWD3Q6RI45 1802 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 CCL3L1P16619 93 aa7.63□□□□□ -1.19
VPS13A-203ENST00000360280 BVES-AS1Q5T3Y7 98 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 WFDC12Q8WWY7 111 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 NSUN5P1Q3KNT7 163 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 MINOS1Q5TGZ0 78 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 VSIRQ9H7M9 311 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 MINOS1-NBL1R4GNA1 71 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 CACNA1BQ00975 2339 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 FNDC1Q4ZHG4 1894 aaPredicted RBP7.62□□□□□ -1.19
VPS13A-203ENST00000360280 CLPSL1A2RUU4 121 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 C4orf51C9J302 202 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 FAM201AQ5SY85 155 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 RNF5Q99942 180 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 CELA3BP08861 270 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 CEND1Q8N111 149 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 WBP1Q96G27 269 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 PCNX1Q96RV3 2341 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 SUPT4H1P63272 117 aaKnown RBP7.62□□□□□ -1.19
VPS13A-203ENST00000360280 MORN5Q5VZ52 161 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 RPP25LQ8N5L8 163 aaKnown RBP7.62□□□□□ -1.19
VPS13A-203ENST00000360280 SHISA3A0PJX4 238 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 DAZ1Q9NQZ3 744 aaKnown RBP7.62□□□□□ -1.19
VPS13A-203ENST00000360280 EREGO14944 169 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 THSD7AQ9UPZ6 1657 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 SVIPQ8NHG7 77 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 FUSP35637 526 aaKnown RBP eCLIP7.62□□□□□ -1.19
VPS13A-203ENST00000360280 LTBRP36941 435 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 FAM27E3Q08E93 113 aa7.62□□□□□ -1.19
VPS13A-203ENST00000360280 SRSF8Q9BRL6 282 aaKnown RBP7.62□□□□□ -1.19
VPS13A-203ENST00000360280 NUP210LQ5VU65 1888 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 PCDH15Q96QU1 1955 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 WFDC1Q9HC57 220 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 CDKN1AP38936 164 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 AMN1Q8IY45 258 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 IGHV2-26A0A0B4J1V2 119 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 CFPP27918 469 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 Q86TA4 180 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 STPG4Q8N801 248 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 ADAMTS7Q9UKP4 1686 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 A0A1W2PR77 199 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 ZNF329Q86UD4 541 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 FOXL2P58012 376 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 KLF5Q13887 457 aaPredicted RBP7.61□□□□□ -1.19
VPS13A-203ENST00000360280 POLR3KQ9Y2Y1 108 aaPredicted RBP7.61□□□□□ -1.19
VPS13A-203ENST00000360280 COX8AP10176 69 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 Q8TAT8 98 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 H0YIZ8 118 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 CD24P25063 80 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 CRYBA4P53673 196 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 DSCR9P59020 149 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 WFDC9Q8NEX5 89 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 LAIR2Q6ISS4 152 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 ETDBQ3ZM63 59 aa7.61□□□□□ -1.19
VPS13A-203ENST00000360280 RNASE6Q93091 150 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms