RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 C15orf32Q32M92 178 aa9.93□□□□□ -0.82
DNMT1-202ENST00000359526 DLX4Q92988 240 aaPredicted RBP9.93□□□□□ -0.82
DNMT1-202ENST00000359526 SIGLEC9Q9Y336 463 aa9.93□□□□□ -0.82
DNMT1-202ENST00000359526 SPTBN1Q01082 2364 aaKnown RBP9.93□□□□□ -0.82
DNMT1-202ENST00000359526 CD300EQ496F6 205 aaPredicted RBP9.93□□□□□ -0.82
DNMT1-202ENST00000359526 GLMPQ8WWB7 406 aa9.93□□□□□ -0.82
DNMT1-202ENST00000359526 SPANXA1Q9NS26 97 aa9.93□□□□□ -0.82
DNMT1-202ENST00000359526 BUB1B-PAK6H3BSN5 160 aa9.92□□□□□ -0.82
DNMT1-202ENST00000359526 ATXN8Q156A1 80 aa9.92□□□□□ -0.82
DNMT1-202ENST00000359526 A0A1B0GUS0 222 aa9.92□□□□□ -0.82
DNMT1-202ENST00000359526 CD24P25063 80 aa9.92□□□□□ -0.82
DNMT1-202ENST00000359526 TSSC4Q9Y5U2 329 aaPredicted RBP9.92□□□□□ -0.82
DNMT1-202ENST00000359526 PLAURQ03405 335 aa9.92□□□□□ -0.82
DNMT1-202ENST00000359526 Q86TA4 180 aa9.92□□□□□ -0.82
DNMT1-202ENST00000359526 C1orf147Q96MC9 270 aaPredicted RBP9.92□□□□□ -0.82
DNMT1-202ENST00000359526 VCYO14598 125 aa9.91□□□□□ -0.82
DNMT1-202ENST00000359526 ZNF581Q9P0T4 197 aa9.91□□□□□ -0.82
DNMT1-202ENST00000359526 K7EP13 123 aa9.91□□□□□ -0.82
DNMT1-202ENST00000359526 LYNX1G3V0Z9 82 aa9.91□□□□□ -0.82
DNMT1-202ENST00000359526 SLC25A20O43772 301 aa9.91□□□□□ -0.82
DNMT1-202ENST00000359526 LYNX1P0DP58 116 aa9.91□□□□□ -0.82
DNMT1-202ENST00000359526 VMO1Q7Z5L0 202 aa9.91□□□□□ -0.82
DNMT1-202ENST00000359526 IGKV1-6A0A0C4DH72 117 aa9.91□□□□□ -0.82
DNMT1-202ENST00000359526 M0R2P5 195 aa9.91□□□□□ -0.82
DNMT1-202ENST00000359526 NCR2O95944 276 aa9.9□□□□□ -0.82
DNMT1-202ENST00000359526 CDPF1Q6NVV7 123 aa9.9□□□□□ -0.82
DNMT1-202ENST00000359526 SHANK2-AS3Q9BTD1 123 aa9.9□□□□□ -0.82
DNMT1-202ENST00000359526 MCRIP2Q9BUT9 160 aaKnown RBP9.9□□□□□ -0.82
DNMT1-202ENST00000359526 LSM4Q9Y4Z0 139 aaKnown RBP9.9□□□□□ -0.82
DNMT1-202ENST00000359526 RNF166Q96A37 237 aaPredicted RBP9.9□□□□□ -0.82
DNMT1-202ENST00000359526 RPL15P61313 204 aaKnown RBP9.9□□□□□ -0.82
DNMT1-202ENST00000359526 Q6ZWC4 215 aa9.9□□□□□ -0.82
DNMT1-202ENST00000359526 TMEM75Q8N9X5 138 aa9.9□□□□□ -0.82
DNMT1-202ENST00000359526 CACNA1GO43497 2377 aa9.9□□□□□ -0.83
DNMT1-202ENST00000359526 MED12Q93074 2177 aa9.9□□□□□ -0.83
DNMT1-202ENST00000359526 PLA2G5P39877 138 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 C5orf24Q7Z6I8 188 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 LIME1Q9H400 295 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 TMEM14BQ9NUH8 114 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 FXYD7P58549 80 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 PRB3Q04118 309 aaPredicted RBP9.89□□□□□ -0.83
DNMT1-202ENST00000359526 C11orf68Q9H3H3 251 aaKnown RBP9.89□□□□□ -0.83
DNMT1-202ENST00000359526 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.89□□□□□ -0.83
DNMT1-202ENST00000359526 PAX9P55771 341 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 STPG4Q8N801 248 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 DOCK11Q5JSL3 2073 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 C9orf118A6NHY6 69 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 ZC2HC1BQ5TFG8 222 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 ABCA7Q8IZY2 2146 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 CFHR2P36980 270 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 ZNF474Q6S9Z5 364 aaPredicted RBP9.89□□□□□ -0.83
DNMT1-202ENST00000359526 TMEM86BQ8N661 226 aa9.89□□□□□ -0.83
DNMT1-202ENST00000359526 MALP21145 153 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 IGLV1-44P01699 117 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 YPEL3P61236 119 aaPredicted RBP9.88□□□□□ -0.83
DNMT1-202ENST00000359526 C1orf122Q6ZSJ8 110 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 FAM231DQ6ZW35 169 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 LRRK1Q38SD2 2015 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 ADARB2-AS1A8MUL3 147 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 C8orf31Q8N9H6 132 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 RNF138Q8WVD3 245 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 UBE2E1P51965 193 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 CHAC1Q9BUX1 264 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 WNK2Q9Y3S1 2297 aa9.88□□□□□ -0.83
DNMT1-202ENST00000359526 HEATR1Q9H583 2144 aaKnown RBP9.87□□□□□ -0.83
DNMT1-202ENST00000359526 IGKV3D-20A0A0C4DH25 116 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 K7EP34 96 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 TMEM158Q8WZ71 300 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 ANAPC1Q9H1A4 1944 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 MMP23AO75900 390 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 AZU1P20160 251 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 LHFPL4Q7Z7J7 247 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 DTX2Q86UW9 622 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 OVOL2Q9BRP0 275 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 TRAV40A0A0B4J280 105 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 GGTLC3B5MD39 225 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 NDUFB8O95169 186 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 TNFRSF6BO95407 300 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 TEX43Q6ZNM6 134 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 LINC00311Q8N616 119 aa9.87□□□□□ -0.83
DNMT1-202ENST00000359526 TRGV4A0A0C4DH28 118 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 C2orf82Q6UX34 121 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 C18orf32Q8TCD1 76 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 GAGE12HA6NDE8 117 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 RASL10AQ92737 203 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 NDUFA4L2Q9NRX3 87 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 MSMBP08118 114 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 ZNF415Q09FC8 603 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 TEX36Q5VZQ5 186 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 DOCK9Q9BZ29 2069 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 IGHV3-64A0A075B6Q5 118 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 RCHY1Q96PM5 261 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 KLF12Q9Y4X4 402 aa9.86□□□□□ -0.83
DNMT1-202ENST00000359526 PRSS46E5RG02 174 aa9.85□□□□□ -0.83
DNMT1-202ENST00000359526 PRB4P10163 310 aaPredicted RBP9.85□□□□□ -0.83
DNMT1-202ENST00000359526 ZNF876PQ49A33 203 aa9.85□□□□□ -0.83
DNMT1-202ENST00000359526 POLEQ07864 2286 aa9.85□□□□□ -0.83
DNMT1-202ENST00000359526 KIAA2026Q5HYC2 2103 aa9.85□□□□□ -0.83
DNMT1-202ENST00000359526 SRD5A1P18405 259 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms