RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 UNQ9165/PRO28630Q6UXU0 137 aa10.6□□□□□ -0.71
PDLIM5-203ENST00000359265 SMIM7Q9BQ49 75 aa10.6□□□□□ -0.71
PDLIM5-203ENST00000359265 OTORQ9NRC9 128 aa10.6□□□□□ -0.71
PDLIM5-203ENST00000359265 TRBV19A0A075B6N1 114 aa10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 IGHV4OR15-8A0A075B7B6 117 aa10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 A0A087WW49 117 aa10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 A0A1W2PS18 150 aa10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 K7EMT4 169 aa10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 ZNF674Q2M3X9 581 aa10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 LYPD1Q8N2G4 141 aa10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 ELOVL1Q9BW60 279 aa10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 Q9H3A6 140 aa10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 DAZ1Q9NQZ3 744 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 UFC1Q9Y3C8 167 aa10.59□□□□□ -0.71
PDLIM5-203ENST00000359265 A0A087X0K7 114 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 IGHV3-49A0A0A0MS15 119 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 PGPA6NDG6 321 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 H3BTX0 84 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 M0R036 132 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 ZNF253O75346 499 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 NDUFB4O95168 129 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 SLC25A5P05141 298 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 SNRPCP09234 159 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 BMI1P35226 326 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 MYCNOSP40205 109 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 MEOX2P50222 304 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 PNRC1Q12796 327 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 FOXL1Q12952 345 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 TCTEX1D4Q5JR98 221 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 C16orf54Q6UWD8 224 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 REC114Q7Z4M0 266 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 C5orf17Q8NAS9 161 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 CLRN3Q8NCR9 226 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 KLHL30-AS1Q8NEE0 82 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 TVP23CQ96ET8 276 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 NAT8Q9UHE5 227 aa10.58□□□□□ -0.72
PDLIM5-203ENST00000359265 IGHV3-66A0A0C4DH42 116 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 IGHV7-4-1A0A0J9YVY3 117 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 ZNF785A8K8V0 405 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 AKR1C3P42330 323 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 PROK1P58294 105 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 PSG9Q00887 426 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 C1QL4Q86Z23 238 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 GLMPQ8WWB7 406 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 DPF1Q92782 380 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 HIST1H2BAQ96A08 127 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 AAMDCQ9H7C9 122 aa10.57□□□□□ -0.72
PDLIM5-203ENST00000359265 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 IGHV3-74A0A0B4J1X5 117 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 A8MWP6 167 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 LINC01619G3V211 115 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 LGALS9O00182 355 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 PEX7O00628 323 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 APOHP02749 345 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 HOXD3P31249 432 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 CNN1P51911 297 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 TMEM241Q24JQ0 296 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 AWAT1Q58HT5 328 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 SIGLEC15Q6ZMC9 328 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 CMTM2Q8TAZ6 248 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 C17orf77Q96MU5 243 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 DERL1Q9BUN8 251 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 SDF2L1Q9HCN8 221 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 EPDR1Q9UM22 224 aa10.56□□□□□ -0.72
PDLIM5-203ENST00000359265 SLC17A3O00476 420 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 CD28P10747 220 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 RHEBQ15382 184 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 ATRAIDQ6UW56 229 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 C18orf65Q6ZTR6 163 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 OR1N2Q8NGR9 330 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 C2CD4CQ8TF44 421 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 SLC50A1Q9BRV3 221 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 ATG101Q9BSB4 218 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 SMPXQ9UHP9 88 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 RPH3ALQ9UNE2 315 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 TSSC4Q9Y5U2 329 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 SMAD5-AS1Q9Y6J3 95 aa10.55□□□□□ -0.72
PDLIM5-203ENST00000359265 HELTA6NFD8 242 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 C9JCJ5 164 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 RPL35P42766 123 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 SYNJ2BPP57105 145 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 GNG5P63218 68 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 DEFB136Q30KP8 78 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 PRR31Q5SQ13 230 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 EXOC3-AS1Q8N2X6 119 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 OR11H1Q8NG94 326 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 RHPN1-AS1Q9BWJ2 59 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 CMYA5Q8N3K9 4069 aa10.54□□□□□ -0.72
PDLIM5-203ENST00000359265 TMEM213A2RRL7 107 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 C7orf77A4D0Y5 90 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 B4DEV8 164 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 LCE2BO14633 110 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 CHEK1O14757 476 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 SCO1O75880 301 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 TCRAP04437 139 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 S100A9P06702 114 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 CSN1S1P47710 185 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 SLURP1P55000 103 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms