RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 DEFB125Q8N687 156 aa12.66□□□□□ -0.38
PTPN5-201ENST00000358540 TMEM116Q8NCL8 245 aa12.66□□□□□ -0.38
PTPN5-201ENST00000358540 ZFYVE26Q68DK2 2539 aa12.66□□□□□ -0.38
PTPN5-201ENST00000358540 SMIM27A0A1W2PRY6 76 aa12.65□□□□□ -0.38
PTPN5-201ENST00000358540 IZUMO1RA6ND01 250 aa12.65□□□□□ -0.38
PTPN5-201ENST00000358540 ISLRO14498 428 aa12.65□□□□□ -0.38
PTPN5-201ENST00000358540 HOXB4P17483 251 aaPredicted RBP12.65□□□□□ -0.38
PTPN5-201ENST00000358540 TRAV8-6A0A0B4J262 113 aa12.65□□□□□ -0.38
PTPN5-201ENST00000358540 RPS20P60866 119 aaKnown RBP12.65□□□□□ -0.38
PTPN5-201ENST00000358540 SMIM12Q96EX1 92 aa12.65□□□□□ -0.38
PTPN5-201ENST00000358540 TRGV9Q99603 122 aa12.65□□□□□ -0.38
PTPN5-201ENST00000358540 CIDEAO60543 219 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 SLC25A34Q6PIV7 304 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 I3L2K1 104 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 NDPQ00604 133 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 PVRIGQ6DKI7 326 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 ZNF329Q86UD4 541 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 PERPQ96FX8 193 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 MCRIP2Q9BUT9 160 aaKnown RBP12.64□□□□□ -0.39
PTPN5-201ENST00000358540 H0Y8G0 127 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 IGLC1P0CG04 106 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 GDF5OSQ5U4N7 250 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
PTPN5-201ENST00000358540 FLNCQ14315 2725 aa12.63□□□□□ -0.39
PTPN5-201ENST00000358540 A0A087X0K7 114 aa12.63□□□□□ -0.39
PTPN5-201ENST00000358540 C12orf54Q6X4T0 127 aa12.63□□□□□ -0.39
PTPN5-201ENST00000358540 LINC00173Q6ZV60 143 aa12.63□□□□□ -0.39
PTPN5-201ENST00000358540 CHTOPQ9Y3Y2 248 aaKnown RBP12.63□□□□□ -0.39
PTPN5-201ENST00000358540 CORTO00230 105 aa12.63□□□□□ -0.39
PTPN5-201ENST00000358540 IGLV2-8P01709 118 aa12.63□□□□□ -0.39
PTPN5-201ENST00000358540 EFNA4P52798 201 aa12.63□□□□□ -0.39
PTPN5-201ENST00000358540 C5orf64Q2M2E5 130 aa12.63□□□□□ -0.39
PTPN5-201ENST00000358540 K7EIM0 57 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 IGHV3-23P01764 117 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 IGF2BP2-AS1Q96M15 143 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 RNF5Q99942 180 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 RASL11BQ9BPW5 248 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 ST20Q9HBF5 79 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 CELSR1Q9NYQ6 3014 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 FAM120AOSQ5T036 256 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 ZFHX3Q15911 3703 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 PGPA6NDG6 321 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 PEX7O00628 323 aa12.62□□□□□ -0.39
PTPN5-201ENST00000358540 SLC25A5P05141 298 aaKnown RBP12.62□□□□□ -0.39
PTPN5-201ENST00000358540 TIMM8BQ9Y5J9 83 aaPredicted RBP12.62□□□□□ -0.39
PTPN5-201ENST00000358540 HSBP1L1C9JCN9 74 aa12.61□□□□□ -0.39
PTPN5-201ENST00000358540 IGKV1-17P01599 117 aa12.61□□□□□ -0.39
PTPN5-201ENST00000358540 USP9XQ93008 2570 aaPredicted RBP12.61□□□□□ -0.39
PTPN5-201ENST00000358540 IGHV3OR16-10A0A075B7F0 116 aa12.61□□□□□ -0.39
PTPN5-201ENST00000358540 SNAI2O43623 268 aa12.61□□□□□ -0.39
PTPN5-201ENST00000358540 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
PTPN5-201ENST00000358540 GAGE10A6NGK3 116 aa12.6□□□□□ -0.39
PTPN5-201ENST00000358540 NDUFA3O95167 84 aa12.6□□□□□ -0.39
PTPN5-201ENST00000358540 NBEAP1P0C6P0 100 aa12.6□□□□□ -0.39
PTPN5-201ENST00000358540 NUP35Q8NFH5 326 aa12.6□□□□□ -0.39
PTPN5-201ENST00000358540 SIRPDQ9H106 197 aa12.6□□□□□ -0.39
PTPN5-201ENST00000358540 HIGD1AQ9Y241 93 aa12.6□□□□□ -0.39
PTPN5-201ENST00000358540 NPBQ8NG41 125 aa12.6□□□□□ -0.39
PTPN5-201ENST00000358540 CD5LO43866 347 aa12.6□□□□□ -0.39
PTPN5-201ENST00000358540 BCL6BQ8N143 479 aaPredicted RBP12.6□□□□□ -0.39
PTPN5-201ENST00000358540 PMCHL2Q9BQD1 86 aa12.6□□□□□ -0.39
PTPN5-201ENST00000358540 CHRDL1Q9BU40 450 aa12.6□□□□□ -0.39
PTPN5-201ENST00000358540 PEF1Q9UBV8 284 aaKnown RBP12.6□□□□□ -0.39
PTPN5-201ENST00000358540 SYS1-DBNDD2H3BUS1 97 aa12.59□□□□□ -0.39
PTPN5-201ENST00000358540 GP9P14770 177 aa12.59□□□□□ -0.39
PTPN5-201ENST00000358540 ARPC1AQ92747 370 aa12.59□□□□□ -0.39
PTPN5-201ENST00000358540 MYO18BQ8IUG5 2567 aa12.58□□□□□ -0.39
PTPN5-201ENST00000358540 LMO4P61968 165 aa12.58□□□□□ -0.4
PTPN5-201ENST00000358540 PAX2Q02962 417 aa12.58□□□□□ -0.4
PTPN5-201ENST00000358540 FER1L6-AS1Q8NA97 138 aa12.58□□□□□ -0.4
PTPN5-201ENST00000358540 URB1-AS1Q96HZ7 61 aa12.58□□□□□ -0.4
PTPN5-201ENST00000358540 SLC25A39Q9BZJ4 359 aaPredicted RBP12.58□□□□□ -0.4
PTPN5-201ENST00000358540 C7orf71A4D174 169 aa12.58□□□□□ -0.4
PTPN5-201ENST00000358540 LEPROTL1O95214 131 aa12.58□□□□□ -0.4
PTPN5-201ENST00000358540 IGHV4-39P01824 125 aa12.58□□□□□ -0.4
PTPN5-201ENST00000358540 KLF5Q13887 457 aaPredicted RBP12.58□□□□□ -0.4
PTPN5-201ENST00000358540 UTP20O75691 2785 aaKnown RBP12.58□□□□□ -0.4
PTPN5-201ENST00000358540 CCDC144NLQ6NUI1 221 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 ASCL2Q99929 193 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 EPDR1Q9UM22 224 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 SAA4P35542 130 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 Q71RC1 249 aaPredicted RBP12.57□□□□□ -0.4
PTPN5-201ENST00000358540 EXOC3-AS1Q8N2X6 119 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 Q9H3A6 140 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 IGHV3OR16-8A0A075B7F1 116 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 FAM231BA6NCW3 169 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 OR2J3O76001 311 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 IL4P05112 153 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 C17orf77Q96MU5 243 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 FANCD2OSQ96PS1 177 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 NAA38Q9BRA0 125 aaKnown RBP12.57□□□□□ -0.4
PTPN5-201ENST00000358540 TMEM191AQ9H0A3 160 aa12.57□□□□□ -0.4
PTPN5-201ENST00000358540 TRAV8-1A0A0A6YYK1 113 aa12.56□□□□□ -0.4
PTPN5-201ENST00000358540 IGHV3-35A0A0C4DH35 117 aa12.56□□□□□ -0.4
PTPN5-201ENST00000358540 HIGD1CA8MV81 97 aa12.56□□□□□ -0.4
PTPN5-201ENST00000358540 MYCNOSP40205 109 aa12.56□□□□□ -0.4
PTPN5-201ENST00000358540 FOXE3Q13461 319 aa12.56□□□□□ -0.4
PTPN5-201ENST00000358540 C1orf122Q6ZSJ8 110 aa12.56□□□□□ -0.4
PTPN5-201ENST00000358540 WIPF2Q8TF74 440 aaPredicted RBP12.56□□□□□ -0.4
PTPN5-201ENST00000358540 CRYBG3Q68DQ2 2970 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms