RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 C16orf92Q96LL3 132 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 AGRNO00468 2067 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 H3BTX0 84 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 HIST1H1EP10412 219 aaKnown RBP11.4□□□□□ -0.58
TPM1-206ENST00000358278 SNRPD3P62318 126 aaKnown RBP11.4□□□□□ -0.58
TPM1-206ENST00000358278 GUK1Q16774 197 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 FAM74A1Q5RGS3 127 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 IQCF2Q8IXL9 164 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 BLNKQ8WV28 456 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 RNF141Q8WVD5 230 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 MAP1LC3B2A6NCE7 125 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 H3BQ15 152 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 CXorf1O96002 111 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 CD7P09564 240 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 ZNF688P0C7X2 276 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 ID1P41134 155 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 SULT1A2P50226 295 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 FAM24BQ8N5W8 94 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 ZNF503Q96F45 646 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 C17orf77Q96MU5 243 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 MAP1LC3BQ9GZQ8 125 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 ZNF586Q9NXT0 402 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 UBQLN2Q9UHD9 624 aa11.39□□□□□ -0.59
TPM1-206ENST00000358278 ISLRO14498 428 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 NBEAP1P0C6P0 100 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 PSMB3P49720 205 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 FXYD5Q96DB9 178 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 SLC50A1Q9BRV3 221 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 TRBV19A0A075B6N1 114 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 OR11H12B2RN74 326 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 SLC17A3O00476 420 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 SOCS3O14543 225 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 FGF8P55075 233 aaPredicted RBP11.38□□□□□ -0.59
TPM1-206ENST00000358278 LINC00052Q96N35 136 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 MAP6D1Q9H9H5 199 aa11.38□□□□□ -0.59
TPM1-206ENST00000358278 PRB2P02812 416 aaPredicted RBP11.37□□□□□ -0.59
TPM1-206ENST00000358278 GCHFRP30047 84 aa11.37□□□□□ -0.59
TPM1-206ENST00000358278 CMC4P56277 68 aaPredicted RBP11.37□□□□□ -0.59
TPM1-206ENST00000358278 PDE6HQ13956 83 aa11.37□□□□□ -0.59
TPM1-206ENST00000358278 ODF3L2Q3SX64 289 aa11.37□□□□□ -0.59
TPM1-206ENST00000358278 PSMG4Q5JS54 123 aa11.37□□□□□ -0.59
TPM1-206ENST00000358278 SFT2D1Q8WV19 159 aa11.37□□□□□ -0.59
TPM1-206ENST00000358278 ZNF705EA8MWA4 302 aaPredicted RBP11.36□□□□□ -0.59
TPM1-206ENST00000358278 ZNF253O75346 499 aa11.36□□□□□ -0.59
TPM1-206ENST00000358278 H2AFB1P0C5Y9 115 aa11.36□□□□□ -0.59
TPM1-206ENST00000358278 DEFB131AP59861 70 aa11.36□□□□□ -0.59
TPM1-206ENST00000358278 IGFL4Q6B9Z1 124 aa11.36□□□□□ -0.59
TPM1-206ENST00000358278 RNF182Q8N6D2 247 aa11.36□□□□□ -0.59
TPM1-206ENST00000358278 SAT2Q96F10 170 aaPredicted RBP11.36□□□□□ -0.59
TPM1-206ENST00000358278 ZNF331Q9NQX6 463 aaPredicted RBP11.36□□□□□ -0.59
TPM1-206ENST00000358278 TMEM167BQ9NRX6 74 aa11.36□□□□□ -0.59
TPM1-206ENST00000358278 AURKAIP1Q9NWT8 199 aaPredicted RBP11.36□□□□□ -0.59
TPM1-206ENST00000358278 A0A1B0GV50 99 aa11.35□□□□□ -0.59
TPM1-206ENST00000358278 PSG9Q00887 426 aa11.35□□□□□ -0.59
TPM1-206ENST00000358278 TEX261Q6UWH6 196 aa11.35□□□□□ -0.59
TPM1-206ENST00000358278 FAM110AQ9BQ89 295 aa11.35□□□□□ -0.59
TPM1-206ENST00000358278 WFDC10AQ9H1F0 79 aa11.35□□□□□ -0.59
TPM1-206ENST00000358278 AAMDCQ9H7C9 122 aa11.35□□□□□ -0.59
TPM1-206ENST00000358278 TRAV8-2A0A0B4J237 113 aa11.35□□□□□ -0.59
TPM1-206ENST00000358278 APRG1Q8IVJ8 170 aa11.35□□□□□ -0.59
TPM1-206ENST00000358278 MBD3L1Q8WWY6 194 aa11.35□□□□□ -0.59
TPM1-206ENST00000358278 MEGF8Q7Z7M0 2845 aa11.35□□□□□ -0.59
TPM1-206ENST00000358278 TEX46H3BTG2 121 aa11.34□□□□□ -0.59
TPM1-206ENST00000358278 NDUFB4O95168 129 aa11.34□□□□□ -0.59
TPM1-206ENST00000358278 IFNA7P01567 189 aa11.34□□□□□ -0.59
TPM1-206ENST00000358278 RANP62826 216 aaKnown RBP11.34□□□□□ -0.59
TPM1-206ENST00000358278 Q8N1Y9 231 aa11.34□□□□□ -0.59
TPM1-206ENST00000358278 ZNF738Q8NE65 137 aa11.34□□□□□ -0.59
TPM1-206ENST00000358278 C20orf173Q96LM9 149 aa11.34□□□□□ -0.59
TPM1-206ENST00000358278 TMPRSS5Q9H3S3 457 aa11.34□□□□□ -0.59
TPM1-206ENST00000358278 HLA-DMBP28068 263 aa11.33□□□□□ -0.6
TPM1-206ENST00000358278 DEFB125Q8N687 156 aa11.33□□□□□ -0.6
TPM1-206ENST00000358278 C19orf73Q9NVV2 129 aa11.33□□□□□ -0.6
TPM1-206ENST00000358278 CLEC5AQ9NY25 188 aa11.33□□□□□ -0.6
TPM1-206ENST00000358278 HBE1P02100 147 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 ICAM4Q14773 271 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 ZNF124Q15973 351 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 PSG3Q16557 428 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 EXOC3-AS1Q8N2X6 119 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 ZNF680Q8NEM1 530 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 Q9H3A6 140 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 BLOC1S1P78537 153 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 LYPD1Q8N2G4 141 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 SUN5Q8TC36 379 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 TUBA4BQ9H853 241 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 SRD5A3Q9H8P0 318 aa11.32□□□□□ -0.6
TPM1-206ENST00000358278 UBE2G2P60604 165 aa11.31□□□□□ -0.6
TPM1-206ENST00000358278 ACTL10Q5JWF8 245 aa11.31□□□□□ -0.6
TPM1-206ENST00000358278 PRELID1Q9Y255 219 aa11.31□□□□□ -0.6
TPM1-206ENST00000358278 TRAV1-1A0A0B4J248 108 aa11.3□□□□□ -0.6
TPM1-206ENST00000358278 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
TPM1-206ENST00000358278 ZNF705FA8MVS1 300 aaPredicted RBP11.3□□□□□ -0.6
TPM1-206ENST00000358278 K7EIL1 84 aa11.3□□□□□ -0.6
TPM1-206ENST00000358278 M0R3E3 92 aa11.3□□□□□ -0.6
TPM1-206ENST00000358278 IGHV4-30-4P0DP06 118 aa11.3□□□□□ -0.6
TPM1-206ENST00000358278 DEFB1P60022 68 aa11.3□□□□□ -0.6
TPM1-206ENST00000358278 EBLN2Q6P2I7 272 aa11.3□□□□□ -0.6
TPM1-206ENST00000358278 STHQ8IWL8 128 aa11.3□□□□□ -0.6
TPM1-206ENST00000358278 RPUSD4Q96CM3 377 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms