RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 OR4C13Q8NGP0 309 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 ZNF502Q8TBZ5 544 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 NDUFA3O95167 84 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 HBDP02042 147 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 AAMDCQ9H7C9 122 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 S4R3C0 116 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 DSPP15924 2871 aaKnown RBP8.05□□□□□ -1.12
RNF40-202ENST00000357890 NCBP2LA6PVI3 153 aaKnown RBP8.05□□□□□ -1.12
RNF40-202ENST00000357890 TMEM249Q2WGJ8 235 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 TMEM30BQ3MIR4 351 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 RPEQ96AT9 228 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 HIGD1AQ9Y241 93 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 MALRD1Q5VYJ5 2156 aa8.05□□□□□ -1.12
RNF40-202ENST00000357890 MBD3L4A6NDZ8 208 aaPredicted RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 MBD3L3A6NE82 208 aaPredicted RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 MBD3L5A6NJ08 208 aaPredicted RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 IL4P05112 153 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 COX7A1P24310 79 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 CD40P25942 277 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 AMN1Q8IY45 258 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 ORMDL3Q8N138 153 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 SYT8Q8NBV8 401 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 MBD3L2Q8NHZ7 208 aaPredicted RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 OSR1Q8TAX0 266 aaPredicted RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 ZNF48Q96MX3 618 aaPredicted RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 CHAC1Q9BUX1 264 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 TANC2Q9HCD6 1990 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 SRRM4A7MD48 611 aaKnown RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 J3KRW8 73 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 TM4SF5O14894 197 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 LGALS7P47929 136 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 ATP5IP56385 69 aaPredicted RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 TMPRSS3P57727 454 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 C2orf83Q53S99 150 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 RPUSD1Q9UJJ7 312 aaKnown RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 SPENQ96T58 3664 aaKnown RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 SMG1Q96Q15 3661 aaKnown RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 PRR20EP86478 221 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 PRR20CP86479 221 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 PRR20DP86480 221 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 PRR20BP86481 221 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 PRR20AP86496 221 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 KLF5Q13887 457 aaPredicted RBP8.04□□□□□ -1.12
RNF40-202ENST00000357890 C17orf58Q2M2W7 97 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 MYOZ3Q8TDC0 251 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 CACNG8Q8WXS5 425 aa8.04□□□□□ -1.12
RNF40-202ENST00000357890 IGHV1-46P01743 117 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 LEPP41159 167 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 HES1Q14469 280 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 TTC32Q5I0X7 151 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 VGLL1Q99990 258 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 ZNF747Q9BV97 191 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 SOX21Q9Y651 276 aaPredicted RBP8.03□□□□□ -1.12
RNF40-202ENST00000357890 NAV3Q8IVL0 2385 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 ZC2HC1BQ5TFG8 222 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 ZNF474Q6S9Z5 364 aaPredicted RBP8.03□□□□□ -1.12
RNF40-202ENST00000357890 RPRMLQ8N4K4 120 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 OR5AN1Q8NGI8 311 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 MAP1LC3AQ9H492 121 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 NGBQ9NPG2 151 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 DKK2Q9UBU2 259 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 TNRC6BQ9UPQ9 1833 aaKnown RBP8.03□□□□□ -1.12
RNF40-202ENST00000357890 FXYD2P54710 66 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 Q8N7P7 452 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 MRAP2Q96G30 205 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 RASL11BQ9BPW5 248 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 CYSLTR1Q9Y271 337 aa8.03□□□□□ -1.12
RNF40-202ENST00000357890 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.03□□□□□ -1.121e-6■■■□□ 16.4
RNF40-202ENST00000357890 C16orf97H3BN30 126 aa8.02□□□□□ -1.12
RNF40-202ENST00000357890 RNASE2P10153 161 aaKnown RBP8.02□□□□□ -1.12
RNF40-202ENST00000357890 SSBP2P81877 361 aaPredicted RBP8.02□□□□□ -1.12
RNF40-202ENST00000357890 IGFL2Q6UWQ7 119 aa8.02□□□□□ -1.12
RNF40-202ENST00000357890 SLC25A2Q9BXI2 301 aa8.02□□□□□ -1.12
RNF40-202ENST00000357890 INSIG2Q9Y5U4 225 aa8.02□□□□□ -1.12
RNF40-202ENST00000357890 PCSK5Q92824 1860 aa8.02□□□□□ -1.13
RNF40-202ENST00000357890 IGKV1OR2-108A0A075B7D4 117 aa8.02□□□□□ -1.13
RNF40-202ENST00000357890 TMEM213A2RRL7 107 aa8.02□□□□□ -1.13
RNF40-202ENST00000357890 RPL27AP46776 148 aaKnown RBP8.02□□□□□ -1.13
RNF40-202ENST00000357890 FMC1Q96HJ9 113 aa8.02□□□□□ -1.13
RNF40-202ENST00000357890 DKK4Q9UBT3 224 aa8.02□□□□□ -1.13
RNF40-202ENST00000357890 OTOGLQ3ZCN5 2332 aa8.02□□□□□ -1.13
RNF40-202ENST00000357890 B5MCH6 92 aa8.02□□□□□ -1.13
RNF40-202ENST00000357890 IGLV2-8P01709 118 aa8.02□□□□□ -1.13
RNF40-202ENST00000357890 CLEC3BP05452 202 aa8.02□□□□□ -1.13
RNF40-202ENST00000357890 WT1P19544 449 aaPredicted RBP8.02□□□□□ -1.13
RNF40-202ENST00000357890 MSMPQ1L6U9 139 aa8.02□□□□□ -1.13
RNF40-202ENST00000357890 C1orf229Q6ZS94 237 aaPredicted RBP8.02□□□□□ -1.13
RNF40-202ENST00000357890 IGHV3-35A0A0C4DH35 117 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 TCRAP04437 139 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 DPF1Q92782 380 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 LINC00312Q9Y6C7 94 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 CFAP47Q6ZTR5 3102 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 IGHV3OR16-8A0A075B7F1 116 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 SMIM17P0DL12 118 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 PRTN3P24158 256 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 TEX29Q8N6K0 151 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 IGF2BP2-AS1Q96M15 143 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 OR11H12B2RN74 326 aa8.01□□□□□ -1.13
RNF40-202ENST00000357890 FOXC1Q12948 553 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms