RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 A0A087X0K7 114 aa19■□□□□ 0.63
SSBP3-202ENST00000357475 ZNF705EA8MWA4 302 aaPredicted RBP19■□□□□ 0.63
SSBP3-202ENST00000357475 SOCS3O14543 225 aa19■□□□□ 0.63
SSBP3-202ENST00000357475 UBE2L3P68036 154 aaKnown RBP19■□□□□ 0.63
SSBP3-202ENST00000357475 SFT2D1Q8WV19 159 aa19■□□□□ 0.63
SSBP3-202ENST00000357475 MBD3L1Q8WWY6 194 aa19■□□□□ 0.63
SSBP3-202ENST00000357475 K7EQG2 157 aa18.99■□□□□ 0.63
SSBP3-202ENST00000357475 CD5P06127 495 aa18.99■□□□□ 0.63
SSBP3-202ENST00000357475 HIST1H1EP10412 219 aaKnown RBP18.99■□□□□ 0.63
SSBP3-202ENST00000357475 GCHFRP30047 84 aa18.99■□□□□ 0.63
SSBP3-202ENST00000357475 PQLC2Q6ZP29 291 aa18.99■□□□□ 0.63
SSBP3-202ENST00000357475 SPAG8Q99932 426 aaPredicted RBP18.99■□□□□ 0.63
SSBP3-202ENST00000357475 DNASE2O00115 360 aaPredicted RBP18.98■□□□□ 0.63
SSBP3-202ENST00000357475 CXorf1O96002 111 aa18.98■□□□□ 0.63
SSBP3-202ENST00000357475 H2AFB1P0C5Y9 115 aa18.98■□□□□ 0.63
SSBP3-202ENST00000357475 PRB4P10163 310 aaPredicted RBP18.98■□□□□ 0.63
SSBP3-202ENST00000357475 IQCF2Q8IXL9 164 aa18.98■□□□□ 0.63
SSBP3-202ENST00000357475 SAT2Q96F10 170 aaPredicted RBP18.98■□□□□ 0.63
SSBP3-202ENST00000357475 TRAV8-2A0A0B4J237 113 aa18.97■□□□□ 0.63
SSBP3-202ENST00000357475 NDUFB4O95168 129 aa18.97■□□□□ 0.63
SSBP3-202ENST00000357475 HLA-DMBP28068 263 aa18.97■□□□□ 0.63
SSBP3-202ENST00000357475 GPR61Q9BZJ8 451 aa18.97■□□□□ 0.63
SSBP3-202ENST00000357475 NOTCH1P46531 2555 aa18.96■□□□□ 0.63
SSBP3-202ENST00000357475 TRBV19A0A075B6N1 114 aa18.96■□□□□ 0.63
SSBP3-202ENST00000357475 NBEAP1P0C6P0 100 aa18.96■□□□□ 0.63
SSBP3-202ENST00000357475 CCL20P78556 96 aa18.96■□□□□ 0.63
SSBP3-202ENST00000357475 EGFEM1PQ0D2K5 195 aa18.96■□□□□ 0.63
SSBP3-202ENST00000357475 BEAN1Q3B7T3 259 aa18.96■□□□□ 0.63
SSBP3-202ENST00000357475 PAFAH1B2P68402 229 aa18.95■□□□□ 0.62
SSBP3-202ENST00000357475 RNF182Q8N6D2 247 aa18.95■□□□□ 0.62
SSBP3-202ENST00000357475 C20orf173Q96LM9 149 aa18.95■□□□□ 0.62
SSBP3-202ENST00000357475 NBEAL1Q6ZS30 2694 aa18.95■□□□□ 0.62
SSBP3-202ENST00000357475 IFNA7P01567 189 aa18.95■□□□□ 0.62
SSBP3-202ENST00000357475 CD7P09564 240 aa18.95■□□□□ 0.62
SSBP3-202ENST00000357475 PRR25Q96S07 402 aa18.95■□□□□ 0.62
SSBP3-202ENST00000357475 UBQLN2Q9UHD9 624 aa18.95■□□□□ 0.62
SSBP3-202ENST00000357475 ZNF688P0C7X2 276 aa18.94■□□□□ 0.62
SSBP3-202ENST00000357475 SUN5Q8TC36 379 aa18.94■□□□□ 0.62
SSBP3-202ENST00000357475 C16orf92Q96LL3 132 aa18.94■□□□□ 0.62
SSBP3-202ENST00000357475 ZNF331Q9NQX6 463 aaPredicted RBP18.94■□□□□ 0.62
SSBP3-202ENST00000357475 OR4C46A6NHA9 309 aa18.93■□□□□ 0.62
SSBP3-202ENST00000357475 DEFB1P60022 68 aa18.93■□□□□ 0.62
SSBP3-202ENST00000357475 TRAV2A0A0B4J234 112 aa18.92■□□□□ 0.62
SSBP3-202ENST00000357475 GUK1Q16774 197 aa18.92■□□□□ 0.62
SSBP3-202ENST00000357475 EXOC3-AS1Q8N2X6 119 aa18.92■□□□□ 0.62
SSBP3-202ENST00000357475 WFDC10AQ9H1F0 79 aa18.92■□□□□ 0.62
SSBP3-202ENST00000357475 MEOX2P50222 304 aa18.91■□□□□ 0.62
SSBP3-202ENST00000357475 RANP62826 216 aaKnown RBP18.91■□□□□ 0.62
SSBP3-202ENST00000357475 ZNF124Q15973 351 aa18.91■□□□□ 0.62
SSBP3-202ENST00000357475 ODF3L2Q3SX64 289 aa18.91■□□□□ 0.62
SSBP3-202ENST00000357475 LRRC20Q8TCA0 184 aa18.91■□□□□ 0.62
SSBP3-202ENST00000357475 TRAV1-1A0A0B4J248 108 aa18.9■□□□□ 0.62
SSBP3-202ENST00000357475 UBE2G2P60604 165 aa18.9■□□□□ 0.62
SSBP3-202ENST00000357475 LINC00052Q96N35 136 aa18.9■□□□□ 0.62
SSBP3-202ENST00000357475 MAP6D1Q9H9H5 199 aa18.9■□□□□ 0.62
SSBP3-202ENST00000357475 TMEM167BQ9NRX6 74 aa18.9■□□□□ 0.62
SSBP3-202ENST00000357475 YTHDF2Q9Y5A9 579 aaKnown RBP18.9■□□□□ 0.62
SSBP3-202ENST00000357475 ISLRO14498 428 aa18.9■□□□□ 0.62
SSBP3-202ENST00000357475 CD81P60033 236 aa18.9■□□□□ 0.62
SSBP3-202ENST00000357475 PSMG4Q5JS54 123 aa18.9■□□□□ 0.62
SSBP3-202ENST00000357475 C19orf73Q9NVV2 129 aa18.9■□□□□ 0.62
SSBP3-202ENST00000357475 PRB2P02812 416 aaPredicted RBP18.89■□□□□ 0.61
SSBP3-202ENST00000357475 NMBP08949 121 aa18.89■□□□□ 0.61
SSBP3-202ENST00000357475 PSMB3P49720 205 aa18.89■□□□□ 0.61
SSBP3-202ENST00000357475 BLOC1S1P78537 153 aa18.89■□□□□ 0.61
SSBP3-202ENST00000357475 PDE6HQ13956 83 aa18.89■□□□□ 0.61
SSBP3-202ENST00000357475 Q9H3A6 140 aa18.89■□□□□ 0.61
SSBP3-202ENST00000357475 ZNF705FA8MVS1 300 aaPredicted RBP18.88■□□□□ 0.61
SSBP3-202ENST00000357475 M0R3E3 92 aa18.88■□□□□ 0.61
SSBP3-202ENST00000357475 ZNF253O75346 499 aa18.88■□□□□ 0.61
SSBP3-202ENST00000357475 DEFB131AP59861 70 aa18.88■□□□□ 0.61
SSBP3-202ENST00000357475 KPRPQ5T749 579 aaPredicted RBP18.88■□□□□ 0.61
SSBP3-202ENST00000357475 APRG1Q8IVJ8 170 aa18.88■□□□□ 0.61
SSBP3-202ENST00000357475 SLC50A1Q9BRV3 221 aa18.88■□□□□ 0.61
SSBP3-202ENST00000357475 ICAM4Q14773 271 aa18.87■□□□□ 0.61
SSBP3-202ENST00000357475 Q8N1Y9 231 aa18.87■□□□□ 0.61
SSBP3-202ENST00000357475 LYPD6BQ8NI32 183 aa18.87■□□□□ 0.61
SSBP3-202ENST00000357475 TEX46H3BTG2 121 aa18.86■□□□□ 0.61
SSBP3-202ENST00000357475 HBE1P02100 147 aa18.86■□□□□ 0.61
SSBP3-202ENST00000357475 ID1P41134 155 aa18.86■□□□□ 0.61
SSBP3-202ENST00000357475 AGRNO00468 2067 aa18.86■□□□□ 0.61
SSBP3-202ENST00000357475 GGTLC3B5MD39 225 aa18.85■□□□□ 0.61
SSBP3-202ENST00000357475 F6UB75 175 aa18.85■□□□□ 0.61
SSBP3-202ENST00000357475 SNRPD3P62318 126 aaKnown RBP18.85■□□□□ 0.61
SSBP3-202ENST00000357475 PSG9Q00887 426 aa18.85■□□□□ 0.61
SSBP3-202ENST00000357475 ZNF767PQ75MW2 155 aa18.85■□□□□ 0.61
SSBP3-202ENST00000357475 GNG13Q9P2W3 67 aa18.85■□□□□ 0.61
SSBP3-202ENST00000357475 FAM74A7A6NL05 159 aa18.84■□□□□ 0.61
SSBP3-202ENST00000357475 PRAC2D3DTV9 90 aa18.84■□□□□ 0.61
SSBP3-202ENST00000357475 PSG3Q16557 428 aa18.84■□□□□ 0.61
SSBP3-202ENST00000357475 GDF5OSQ5U4N7 250 aa18.84■□□□□ 0.61
SSBP3-202ENST00000357475 GTSCR1Q86UQ5 136 aa18.84■□□□□ 0.61
SSBP3-202ENST00000357475 PAGE4O60829 102 aa18.84■□□□□ 0.61
SSBP3-202ENST00000357475 CITED4Q96RK1 184 aa18.84■□□□□ 0.61
SSBP3-202ENST00000357475 PGPA6NDG6 321 aa18.83■□□□□ 0.6
SSBP3-202ENST00000357475 OR11H12B2RN74 326 aa18.83■□□□□ 0.6
SSBP3-202ENST00000357475 SAMD13Q5VXD3 122 aa18.83■□□□□ 0.6
SSBP3-202ENST00000357475 DEFB125Q8N687 156 aa18.83■□□□□ 0.6
SSBP3-202ENST00000357475 ZNF738Q8NE65 137 aa18.83■□□□□ 0.6
SSBP3-202ENST00000357475 AAMDCQ9H7C9 122 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms