RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TMEM249Q2WGJ8 235 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 C14orf178Q8N769 122 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-202ENST00000356435 NABP1Q96AH0 204 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 AGMATQ9BSE5 352 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 TRAV5A0A0B4J249 113 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 GGTLC1Q9BX51 225 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 CABIN1Q9Y6J0 2220 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 IGHV2-70DA0A0C4DH43 119 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 PRSS47A8MTI9 375 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 K7ENP7 123 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 C1QTNF9P0C862 333 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 DEFB131AP59861 70 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 KLF17Q5JT82 389 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-202ENST00000356435 Q6ZS92 163 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 EXOC3-AS1Q8N2X6 119 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 A0A087WWL8 130 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 CR1LQ2VPA4 569 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 SVILO95425 2214 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 IGHG3P01860 377 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 PRTN3P24158 256 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 COL8A2P25067 703 aa4.51□□□□□ -1.69
PTPRD-202ENST00000356435 ZNF48Q96MX3 618 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE12JA6NER3 117 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 C9JQL5 133 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE4Q13068 117 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE5Q13069 117 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 PMVKQ15126 192 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE13Q4V321 117 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 C10orf55Q5SWW7 151 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 WDR83OSQ9Y284 106 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 AZU1P20160 251 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE2AQ6NT46 116 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 Q8TAT8 98 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 TMEM141Q96I45 108 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 YPEL4Q96NS1 127 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 PDE6HQ13956 83 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 SPATA31B1PQ5VZV4 182 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 UBE2WQ96B02 151 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 SHANK2-AS3Q9BTD1 123 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 XCL2Q9UBD3 114 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 DKK4Q9UBT3 224 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 SIGLEC9Q9Y336 463 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 SAMD5Q5TGI4 173 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 IL17RELQ6ZVW7 336 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 SCN10AQ9Y5Y9 1956 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 YLPM1P49750 1951 aaKnown RBP4.5□□□□□ -1.69
PTPRD-202ENST00000356435 UBE2BP63146 152 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 Q71RC1 249 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-202ENST00000356435 Q86TA4 180 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 FLVCR1-AS1Q8TAF5 88 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 CEP290O15078 2479 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 KIR2DL5BA0A0G2JN68 375 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 KIR2DL5BA0A0G2JPC4 375 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 I3L3M4 83 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 NDUFB8O95169 186 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 CLPSP04118 112 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 C2orf82Q6UX34 121 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 KIR2DL5AQ8N109 375 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 HEATR5BQ9P2D3 2071 aa4.5□□□□□ -1.69
PTPRD-202ENST00000356435 CT83Q5H943 113 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 GFRA4Q9GZZ7 299 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 ABCA4P78363 2273 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 IGKV1-9A0A0C4DH69 117 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 CFHR3Q02985 330 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 KLF5Q13887 457 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-202ENST00000356435 Q6ZS49 121 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 LHFPL4Q7Z7J7 247 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 Q8TCH9 128 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 ATP6V0E1O15342 81 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 CD5LO43866 347 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 PAX9P55771 341 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 SSBP2P81877 361 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-202ENST00000356435 ID3Q02535 119 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 CASP8AP2Q9UKL3 1982 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 CFHR2P36980 270 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 TMEM256Q8N2U0 113 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 TMEM243Q9BU79 118 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 FNDC4Q9H6D8 234 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-202ENST00000356435 PRSS29PA6NIE9 313 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 TMEM75Q8N9X5 138 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 C1orf147Q96MC9 270 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-202ENST00000356435 ASCC3Q8N3C0 2202 aaKnown RBP4.49□□□□□ -1.69
PTPRD-202ENST00000356435 PFN1P07737 140 aaKnown RBP4.49□□□□□ -1.69
PTPRD-202ENST00000356435 NMSQ5H8A3 153 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 C1orf122Q6ZSJ8 110 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 LY96Q9Y6Y9 160 aa4.49□□□□□ -1.69
PTPRD-202ENST00000356435 MYLKQ15746 1914 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 HEATR5AQ86XA9 2040 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 CRLF1O75462 422 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 RPRMLQ8N4K4 120 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 FGFBP3Q8TAT2 258 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 BRCA1P38398 1863 aaKnown RBP4.48□□□□□ -1.69
PTPRD-202ENST00000356435 TRBV6-6A0A0A6YYG2 114 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 CXCL1P09341 107 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 TRAV8-3A0A0A6YYJ7 113 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 SPXQ9BT56 116 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 IGKV1D-17A0A075B6S4 117 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 SOCS3O14543 225 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 DKK1O94907 266 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 SLAQ13239 276 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms