RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PXDC1Q5TGL8 231 aa7.56□□□□□ -1.2
CAPN3-204ENST00000356316 TMEM88Q6PEY1 159 aa7.56□□□□□ -1.2
CAPN3-204ENST00000356316 TMEM256Q8N2U0 113 aa7.56□□□□□ -1.2
CAPN3-204ENST00000356316 C15orf53Q8NAA6 179 aa7.56□□□□□ -1.2
CAPN3-204ENST00000356316 C17orf77Q96MU5 243 aa7.56□□□□□ -1.2
CAPN3-204ENST00000356316 UHRF2Q96PU4 802 aa7.56□□□□□ -1.2
CAPN3-204ENST00000356316 FLVCR2Q9UPI3 526 aa7.56□□□□□ -1.2
CAPN3-204ENST00000356316 TRAV12-2A0A075B6T6 113 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 L7N2F9 121 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 ZNF701M0R085 212 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-204ENST00000356316 TSC22D2O75157 780 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 TSPOP30536 169 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 VAMP2P63027 116 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 ZNF846Q147U1 533 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 PSG3Q16557 428 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 TMEM14EPQ6UXP3 125 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 ZNF546Q86UE3 836 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 OR8A1Q8NGG7 326 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 KRTAP17-1Q9BYP8 105 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 ARV1Q9H2C2 271 aa7.55□□□□□ -1.2
CAPN3-204ENST00000356316 A0A087X0K7 114 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 PMS2P5A8MQ11 134 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 F5H768 121 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 K7EPK0 472 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 RTL8CO15255 209 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 CRXO43186 299 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-204ENST00000356316 COX7A2P2O60397 106 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 PRM2P04554 102 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 ATP5G1P05496 136 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 MED14OSP0DP75 135 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 CXCL3P19876 107 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 ATP5G3P48201 142 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 FAM3BP58499 235 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-204ENST00000356316 SLC38A11Q08AI6 406 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 RAB31Q13636 194 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 C1orf134Q5TEV5 83 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 LCN15Q6UWW0 184 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 LINC00305Q7Z4B0 112 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 BPIFA4PQ86YQ2 179 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 BAP18Q8IXM2 172 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 ZBTB8BQ8NAP8 495 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-204ENST00000356316 RPUSD4Q96CM3 377 aaKnown RBP7.54□□□□□ -1.2
CAPN3-204ENST00000356316 GGACTQ9BVM4 153 aa7.54□□□□□ -1.2
CAPN3-204ENST00000356316 A0A1B0GVY2 172 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 CBY3A6NI87 242 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 AGPAT2O15120 278 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 CCNKO75909 580 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 NUDT3O95989 172 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 CXCL2P19875 107 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 AZU1P20160 251 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 CDKN1BP46527 198 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 BCAP31P51572 246 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 TAS2R60P59551 318 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 FCN2Q15485 313 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 PATE2Q6UY27 113 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 Q6ZRG5 221 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 CCDC28AQ8IWP9 274 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 OR10J6PQ8NGY7 276 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 MITD1Q8WV92 249 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 C16orf74Q96GX8 76 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 SLC50A1Q9BRV3 221 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 TIMM8BQ9Y5J9 83 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-204ENST00000356316 HERC2O95714 4834 aa7.53□□□□□ -1.2
CAPN3-204ENST00000356316 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
CAPN3-204ENST00000356316 FAM25EA8MYX2 175 aa7.52□□□□□ -1.21
CAPN3-204ENST00000356316 MBPP02686 304 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-204ENST00000356316 CCL18P55774 89 aa7.52□□□□□ -1.21
CAPN3-204ENST00000356316 C10orf113Q5VZT2 155 aa7.52□□□□□ -1.21
CAPN3-204ENST00000356316 ZNF493Q6ZR52 646 aa7.52□□□□□ -1.21
CAPN3-204ENST00000356316 Q6ZR54 194 aa7.52□□□□□ -1.21
CAPN3-204ENST00000356316 RBM38Q9H0Z9 239 aaKnown RBP7.52□□□□□ -1.21
CAPN3-204ENST00000356316 C5orf51A6NDU8 294 aa7.51□□□□□ -1.21
CAPN3-204ENST00000356316 H7BYZ3 331 aa7.51□□□□□ -1.21
CAPN3-204ENST00000356316 SNRPCP09234 159 aaKnown RBP7.51□□□□□ -1.21
CAPN3-204ENST00000356316 IL7P13232 177 aa7.51□□□□□ -1.21
CAPN3-204ENST00000356316 PVALBP20472 110 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-204ENST00000356316 CLINT1Q14677 625 aa7.51□□□□□ -1.21
CAPN3-204ENST00000356316 C20orf144Q9BQM9 153 aa7.51□□□□□ -1.21
CAPN3-204ENST00000356316 C20orf85Q9H1P6 137 aa7.51□□□□□ -1.21
CAPN3-204ENST00000356316 DNAJC4Q9NNZ3 241 aa7.51□□□□□ -1.21
CAPN3-204ENST00000356316 NOP10Q9NPE3 64 aaKnown RBP7.51□□□□□ -1.21
CAPN3-204ENST00000356316 ZNF331Q9NQX6 463 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-204ENST00000356316 RCL1Q9Y2P8 373 aaKnown RBP7.51□□□□□ -1.21
CAPN3-204ENST00000356316 LSM5Q9Y4Y9 91 aaKnown RBP7.51□□□□□ -1.21
CAPN3-204ENST00000356316 PXMP4Q9Y6I8 212 aa7.51□□□□□ -1.21
CAPN3-204ENST00000356316 DNAH2Q9P225 4427 aa7.51□□□□□ -1.21
CAPN3-204ENST00000356316 CAMLGP49069 296 aa7.5□□□□□ -1.21
CAPN3-204ENST00000356316 CAV2P51636 162 aa7.5□□□□□ -1.21
CAPN3-204ENST00000356316 GUK1Q16774 197 aa7.5□□□□□ -1.21
CAPN3-204ENST00000356316 C12orf45Q8N5I9 185 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-204ENST00000356316 OR1L4Q8NGR5 311 aa7.5□□□□□ -1.21
CAPN3-204ENST00000356316 TMEM263Q8WUH6 116 aaKnown RBP7.5□□□□□ -1.21
CAPN3-204ENST00000356316 TMEM37Q8WXS4 190 aa7.5□□□□□ -1.21
CAPN3-204ENST00000356316 PFDN5Q99471 154 aa7.5□□□□□ -1.21
CAPN3-204ENST00000356316 MGST2Q99735 147 aa7.5□□□□□ -1.21
CAPN3-204ENST00000356316 MRPL18Q9H0U6 180 aaKnown RBP7.5□□□□□ -1.21
CAPN3-204ENST00000356316 TRAV6A0A075B6T7 132 aa7.49□□□□□ -1.21
CAPN3-204ENST00000356316 SNURFLB1AK76 121 aa7.49□□□□□ -1.21
CAPN3-204ENST00000356316 MRPS12O15235 138 aaKnown RBP7.49□□□□□ -1.21
CAPN3-204ENST00000356316 CST7O76096 145 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms