RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 HSF4Q9ULV5 492 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 KLK5Q9Y337 293 aaPredicted RBP8.46□□□□□ -1.06
RTN3-204ENST00000354497 DUXBA0A1W2PPF3 345 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 ZNF253O75346 499 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 PITX3O75364 302 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 IFNA1P01562 189 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 CLEC3BP05452 202 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 BCL2P10415 239 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 AADACP22760 399 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 PIGPP57054 158 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 TAS2R30P59541 319 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 RHOBP62745 196 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 SUPT4H1P63272 117 aaKnown RBP8.45□□□□□ -1.06
RTN3-204ENST00000354497 MSMO1Q15800 293 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 RPEL1Q2QD12 228 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 TMEM30BQ3MIR4 351 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 COX19Q49B96 90 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 ADAD2Q8NCV1 583 aaKnown RBP8.45□□□□□ -1.06
RTN3-204ENST00000354497 DYNLRB2Q8TF09 96 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 TMEM37Q8WXS4 190 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 PDCD1LG2Q9BQ51 273 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 JPT1Q9UK76 154 aa8.45□□□□□ -1.06
RTN3-204ENST00000354497 TRBV9A0A0B4J1U6 114 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 A0A0J9YWU9 116 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 J3QR89 54 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 RBMXL2O75526 392 aaKnown RBP8.44□□□□□ -1.06
RTN3-204ENST00000354497 KBTBD11O94819 623 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 CDS2O95674 445 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 CA2P00918 260 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 GHRHP01286 108 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 AZU1P20160 251 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 MPV17LQ2QL34 196 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 FOXI2Q6ZQN5 318 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 S100A7AQ86SG5 101 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 ZNF709Q8N972 641 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 C5orf17Q8NAS9 161 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 UHRF2Q96PU4 802 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 RSG1Q9BU20 258 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 C5orf66Q9H5L9 145 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 TAS2R4Q9NYW5 299 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 PEMTQ9UBM1 199 aa8.44□□□□□ -1.06
RTN3-204ENST00000354497 TNCP24821 2201 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 A0A0G2JLM5 398 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 DIRC3C9JPN6 131 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 LINC00869P0C866 280 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 SAA2P0DJI9 122 aaPredicted RBP8.43□□□□□ -1.06
RTN3-204ENST00000354497 SOX2P48431 317 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 ATP5IP56385 69 aaPredicted RBP8.43□□□□□ -1.06
RTN3-204ENST00000354497 CCL20P78556 96 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 EWSR1Q01844 656 aaKnown RBP eCLIP8.43□□□□□ -1.06
RTN3-204ENST00000354497 ANKRD55Q3KP44 614 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 CD300EQ496F6 205 aaPredicted RBP8.43□□□□□ -1.06
RTN3-204ENST00000354497 ZNF880Q6PDB4 577 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 ZNF833PQ6ZTB9 187 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 LINC00596Q86U02 117 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 ODF3L1Q8IXM7 274 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 OR2K2Q8NGT1 345 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 OVOL2Q9BRP0 275 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 PARLQ9H300 379 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 MANBALQ9NQG1 85 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 KCNIP1Q9NZI2 227 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 AK3Q9UIJ7 227 aa8.43□□□□□ -1.06
RTN3-204ENST00000354497 A0A1W2PP11 408 aa8.42□□□□□ -1.06
RTN3-204ENST00000354497 SLC17A3O00476 420 aa8.42□□□□□ -1.06
RTN3-204ENST00000354497 TRBV12-3P01733 135 aa8.42□□□□□ -1.06
RTN3-204ENST00000354497 SEC11AP67812 179 aa8.42□□□□□ -1.06
RTN3-204ENST00000354497 IAH1Q2TAA2 248 aaPredicted RBP8.42□□□□□ -1.06
RTN3-204ENST00000354497 TRAT1Q6PIZ9 186 aa8.42□□□□□ -1.06
RTN3-204ENST00000354497 OR1B1Q8NGR6 318 aa8.42□□□□□ -1.06
RTN3-204ENST00000354497 VN1R17PQ8TDU5 208 aa8.42□□□□□ -1.06
RTN3-204ENST00000354497 IL22RA2Q969J5 263 aa8.42□□□□□ -1.06
RTN3-204ENST00000354497 SELENOKQ9Y6D0 94 aa8.42□□□□□ -1.06
RTN3-204ENST00000354497 TRAV9-2A0A087WT02 112 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 TRBV7-9A0A0J9YWB2 115 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 GPX1P07203 203 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 IGFBP3P17936 291 aaPredicted RBP8.41□□□□□ -1.06
RTN3-204ENST00000354497 F2RP25116 425 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 ATP6V0CP27449 155 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 HINT1P49773 126 aaPredicted RBP8.41□□□□□ -1.06
RTN3-204ENST00000354497 HSD52Q0P140 79 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 FXYD3Q14802 87 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 OR10J3Q5JRS4 329 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 ASCL4Q6XD76 172 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 OR2G3Q8NGZ4 309 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 GGTLC1Q9BX51 225 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 C11orf1Q9H5F2 150 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 ST20Q9HBF5 79 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 IL36GQ9NZH8 169 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 TRAPPC1Q9Y5R8 145 aa8.41□□□□□ -1.06
RTN3-204ENST00000354497 IGSF23A1L1A6 192 aa8.4□□□□□ -1.06
RTN3-204ENST00000354497 ZNF785A8K8V0 405 aa8.4□□□□□ -1.06
RTN3-204ENST00000354497 H3BUA1 57 aa8.4□□□□□ -1.06
RTN3-204ENST00000354497 M0R1X1 148 aa8.4□□□□□ -1.06
RTN3-204ENST00000354497 GNG7O60262 68 aa8.4□□□□□ -1.06
RTN3-204ENST00000354497 MAS1P04201 325 aa8.4□□□□□ -1.06
RTN3-204ENST00000354497 S100GP29377 79 aa8.4□□□□□ -1.06
RTN3-204ENST00000354497 ZNF93P35789 620 aaPredicted RBP8.4□□□□□ -1.06
RTN3-204ENST00000354497 PSG9Q00887 426 aa8.4□□□□□ -1.06
RTN3-204ENST00000354497 PSG5Q15238 335 aa8.4□□□□□ -1.06
RTN3-204ENST00000354497 RPL39P5Q59GN2 51 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms