RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 PMS2P11Q13670 270 aa13.66□□□□□ -0.22
VPS72-201ENST00000354473 LCN15Q6UWW0 184 aa13.66□□□□□ -0.22
VPS72-201ENST00000354473 ZNF709Q8N972 641 aa13.66□□□□□ -0.22
VPS72-201ENST00000354473 WDR61Q9GZS3 305 aaKnown RBP13.66□□□□□ -0.22
VPS72-201ENST00000354473 CXorf65A6NEN9 183 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 ZNF705EA8MWA4 302 aaPredicted RBP13.65□□□□□ -0.22
VPS72-201ENST00000354473 H3BTX0 84 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 CXCL2P19875 107 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 HLA-DMBP28068 263 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 PSG9Q00887 426 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 GCSAMLQ5JQS6 135 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 Q8NAQ8 132 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 SMIM3Q9BZL3 60 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 SLC35B3Q9H1N7 401 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 KCNIP2Q9NS61 270 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 X6R8D5 127 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 CSMD3Q7Z407 3707 aa13.65□□□□□ -0.22
VPS72-201ENST00000354473 IGHV4-28A0A0C4DH34 117 aa13.64□□□□□ -0.23
VPS72-201ENST00000354473 IGLC2P0DOY2 106 aa13.64□□□□□ -0.23
VPS72-201ENST00000354473 MIFP14174 115 aa13.64□□□□□ -0.23
VPS72-201ENST00000354473 SLC50A1Q9BRV3 221 aa13.64□□□□□ -0.23
VPS72-201ENST00000354473 TENM2Q9NT68 2774 aa13.64□□□□□ -0.23
VPS72-201ENST00000354473 H3BQ15 152 aa13.64□□□□□ -0.23
VPS72-201ENST00000354473 SLC17A3O00476 420 aa13.64□□□□□ -0.23
VPS72-201ENST00000354473 ZNF705DP0CH99 300 aaPredicted RBP13.64□□□□□ -0.23
VPS72-201ENST00000354473 ZNF705BP0CI00 300 aaPredicted RBP13.64□□□□□ -0.23
VPS72-201ENST00000354473 CNN1P51911 297 aaKnown RBP13.64□□□□□ -0.23
VPS72-201ENST00000354473 PSG3Q16557 428 aa13.64□□□□□ -0.23
VPS72-201ENST00000354473 MFFQ9GZY8 342 aa13.64□□□□□ -0.23
VPS72-201ENST00000354473 HRH4Q9H3N8 390 aa13.64□□□□□ -0.23
VPS72-201ENST00000354473 ZNF331Q9NQX6 463 aaPredicted RBP13.64□□□□□ -0.23
VPS72-201ENST00000354473 A8MTW9 85 aa13.63□□□□□ -0.23
VPS72-201ENST00000354473 C17orf112F2Z3M2 114 aa13.63□□□□□ -0.23
VPS72-201ENST00000354473 DUSP14O95147 198 aaKnown RBP13.63□□□□□ -0.23
VPS72-201ENST00000354473 PRB4P10163 310 aaPredicted RBP13.63□□□□□ -0.23
VPS72-201ENST00000354473 AMTNQ6UX39 209 aa13.63□□□□□ -0.23
VPS72-201ENST00000354473 KMT2CQ8NEZ4 4911 aaKnown RBP13.62□□□□□ -0.23
VPS72-201ENST00000354473 IFNA5P01569 189 aa13.62□□□□□ -0.23
VPS72-201ENST00000354473 RBMY1A1P0DJD3 496 aaKnown RBP13.62□□□□□ -0.23
VPS72-201ENST00000354473 RBMY1CP0DJD4 496 aa13.62□□□□□ -0.23
VPS72-201ENST00000354473 HIST1H1AQ02539 215 aaPredicted RBP13.62□□□□□ -0.23
VPS72-201ENST00000354473 OXA1LQ15070 435 aa13.62□□□□□ -0.23
VPS72-201ENST00000354473 RBMY1FQ15415 496 aaKnown RBP13.62□□□□□ -0.23
VPS72-201ENST00000354473 RPUSD4Q96CM3 377 aaKnown RBP13.62□□□□□ -0.23
VPS72-201ENST00000354473 GIPP09681 153 aaPredicted RBP13.61□□□□□ -0.23
VPS72-201ENST00000354473 NANOS2P60321 138 aaKnown RBP13.61□□□□□ -0.23
VPS72-201ENST00000354473 GUK1Q16774 197 aa13.61□□□□□ -0.23
VPS72-201ENST00000354473 ZNF705AQ6ZN79 300 aaPredicted RBP13.61□□□□□ -0.23
VPS72-201ENST00000354473 OR8A1Q8NGG7 326 aa13.61□□□□□ -0.23
VPS72-201ENST00000354473 C11orf45Q8TAV5 145 aa13.61□□□□□ -0.23
VPS72-201ENST00000354473 SCGB1C1Q8TD33 95 aa13.61□□□□□ -0.23
VPS72-201ENST00000354473 WFDC1Q9HC57 220 aa13.61□□□□□ -0.23
VPS72-201ENST00000354473 TMEM14CQ9P0S9 112 aa13.61□□□□□ -0.23
VPS72-201ENST00000354473 STARD9Q9P2P6 4700 aa13.6□□□□□ -0.23
VPS72-201ENST00000354473 IGHV3OR16-12A0A075B7B8 117 aa13.6□□□□□ -0.23
VPS72-201ENST00000354473 NUPR2A6NF83 97 aa13.6□□□□□ -0.23
VPS72-201ENST00000354473 MIR17HGQ75NE6 70 aa13.6□□□□□ -0.23
VPS72-201ENST00000354473 ASB13Q8WXK3 278 aa13.6□□□□□ -0.23
VPS72-201ENST00000354473 SAT2Q96F10 170 aaPredicted RBP13.6□□□□□ -0.23
VPS72-201ENST00000354473 SLC25A2Q9BXI2 301 aa13.6□□□□□ -0.23
VPS72-201ENST00000354473 ZNF586Q9NXT0 402 aa13.6□□□□□ -0.23
VPS72-201ENST00000354473 ZNF705FA8MVS1 300 aaPredicted RBP13.59□□□□□ -0.23
VPS72-201ENST00000354473 M0R2Z0 102 aa13.59□□□□□ -0.23
VPS72-201ENST00000354473 PYYP10082 97 aa13.59□□□□□ -0.23
VPS72-201ENST00000354473 SPINK13Q1W4C9 94 aa13.59□□□□□ -0.23
VPS72-201ENST00000354473 Q5BKY6 102 aa13.59□□□□□ -0.23
VPS72-201ENST00000354473 MRPL32Q9BYC8 188 aaKnown RBP13.59□□□□□ -0.23
VPS72-201ENST00000354473 PARD6GQ9BYG4 376 aaPredicted RBP13.59□□□□□ -0.23
VPS72-201ENST00000354473 GOLT1BQ9Y3E0 138 aa13.59□□□□□ -0.23
VPS72-201ENST00000354473 TRBV19A0A075B6N1 114 aa13.58□□□□□ -0.24
VPS72-201ENST00000354473 AMBPP02760 352 aa13.58□□□□□ -0.24
VPS72-201ENST00000354473 HIST1H1EP10412 219 aaKnown RBP13.58□□□□□ -0.24
VPS72-201ENST00000354473 RHOBP62745 196 aa13.58□□□□□ -0.24
VPS72-201ENST00000354473 FFAR4Q5NUL3 377 aa13.58□□□□□ -0.24
VPS72-201ENST00000354473 CEMP1Q6PRD7 247 aaPredicted RBP13.58□□□□□ -0.24
VPS72-201ENST00000354473 FAM167A-AS1Q96KT0 104 aa13.58□□□□□ -0.24
VPS72-201ENST00000354473 LCE6AA0A183 80 aa13.57□□□□□ -0.24
VPS72-201ENST00000354473 BOLA2-SMG1P6H3BVE0 249 aa13.57□□□□□ -0.24
VPS72-201ENST00000354473 ZNF253O75346 499 aa13.57□□□□□ -0.24
VPS72-201ENST00000354473 C1orf158Q8N1D5 194 aa13.57□□□□□ -0.24
VPS72-201ENST00000354473 PHLDA1Q8WV24 401 aaPredicted RBP13.57□□□□□ -0.24
VPS72-201ENST00000354473 BLNKQ8WV28 456 aa13.57□□□□□ -0.24
VPS72-201ENST00000354473 IGF2BP2-AS1Q96M15 143 aa13.57□□□□□ -0.24
VPS72-201ENST00000354473 AQP10Q96PS8 301 aa13.57□□□□□ -0.24
VPS72-201ENST00000354473 NEU1Q99519 415 aa13.57□□□□□ -0.24
VPS72-201ENST00000354473 PPP1R14DQ9NXH3 145 aa13.57□□□□□ -0.24
VPS72-201ENST00000354473 FUT9Q9Y231 359 aa13.57□□□□□ -0.24
VPS72-201ENST00000354473 SMIM9A6NGZ8 99 aa13.56□□□□□ -0.24
VPS72-201ENST00000354473 INSP01308 110 aa13.56□□□□□ -0.24
VPS72-201ENST00000354473 BAP18Q8IXM2 172 aa13.56□□□□□ -0.24
VPS72-201ENST00000354473 TIMM9Q9Y5J7 89 aa13.56□□□□□ -0.24
VPS72-201ENST00000354473 RFNGQ9Y644 331 aa13.56□□□□□ -0.24
VPS72-201ENST00000354473 PRAC2D3DTV9 90 aa13.55□□□□□ -0.24
VPS72-201ENST00000354473 NDUFB4O95168 129 aa13.55□□□□□ -0.24
VPS72-201ENST00000354473 PDE6HQ13956 83 aa13.55□□□□□ -0.24
VPS72-201ENST00000354473 OR2T35Q8NGX2 323 aa13.55□□□□□ -0.24
VPS72-201ENST00000354473 OR10J6PQ8NGY7 276 aa13.55□□□□□ -0.24
VPS72-201ENST00000354473 TMEM208Q9BTX3 173 aa13.55□□□□□ -0.24
VPS72-201ENST00000354473 TRAV12-2A0A075B6T6 113 aa13.54□□□□□ -0.24
VPS72-201ENST00000354473 FXYD6-FXYD2A0A087WZ82 144 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms