RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ZNF493Q6ZR52 646 aa19.28■□□□□ 0.68
CPNE1-202ENST00000352393 LY6G5BQ8NDX9 201 aa19.28■□□□□ 0.68
CPNE1-202ENST00000352393 CFHR4Q92496 578 aa19.28■□□□□ 0.68
CPNE1-202ENST00000352393 ZNF747Q9BV97 191 aa19.28■□□□□ 0.68
CPNE1-202ENST00000352393 RAB1BQ9H0U4 201 aa19.28■□□□□ 0.68
CPNE1-202ENST00000352393 PRB4P10163 310 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-202ENST00000352393 NDUFA3O95167 84 aa19.27■□□□□ 0.68
CPNE1-202ENST00000352393 FCGR2BP31994 310 aaPredicted RBP19.27■□□□□ 0.68
CPNE1-202ENST00000352393 PDE6HQ13956 83 aa19.27■□□□□ 0.68
CPNE1-202ENST00000352393 C8orf49Q96NF6 230 aa19.27■□□□□ 0.68
CPNE1-202ENST00000352393 NUDT3O95989 172 aa19.27■□□□□ 0.67
CPNE1-202ENST00000352393 NPBQ8NG41 125 aa19.27■□□□□ 0.67
CPNE1-202ENST00000352393 DMXL2Q8TDJ6 3036 aa19.26■□□□□ 0.67
CPNE1-202ENST00000352393 LOC105371242A0A075B767 164 aa19.26■□□□□ 0.67
CPNE1-202ENST00000352393 H0Y8G0 127 aa19.26■□□□□ 0.67
CPNE1-202ENST00000352393 ZZEF1O43149 2961 aa19.26■□□□□ 0.67
CPNE1-202ENST00000352393 FA2HQ7L5A8 372 aa19.26■□□□□ 0.67
CPNE1-202ENST00000352393 TAX1BP3O14907 124 aa19.25■□□□□ 0.67
CPNE1-202ENST00000352393 KLF17Q5JT82 389 aaPredicted RBP19.25■□□□□ 0.67
CPNE1-202ENST00000352393 BCL6BQ8N143 479 aaPredicted RBP19.25■□□□□ 0.67
CPNE1-202ENST00000352393 ATMQ13315 3056 aa19.25■□□□□ 0.67
CPNE1-202ENST00000352393 CT45A10P0DMU9 189 aa19.25■□□□□ 0.67
CPNE1-202ENST00000352393 OR11H6Q8NGC7 330 aa19.25■□□□□ 0.67
CPNE1-202ENST00000352393 OR10AG1Q8NH19 301 aa19.25■□□□□ 0.67
CPNE1-202ENST00000352393 ZNF48Q96MX3 618 aaPredicted RBP19.25■□□□□ 0.67
CPNE1-202ENST00000352393 PMCHL2Q9BQD1 86 aa19.25■□□□□ 0.67
CPNE1-202ENST00000352393 DPM3Q9P2X0 92 aa19.25■□□□□ 0.67
CPNE1-202ENST00000352393 TRAV30A0A087WSZ9 112 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 K7EP13 123 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 CSN1S1P47710 185 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 ZNF672Q499Z4 452 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-202ENST00000352393 C12orf54Q6X4T0 127 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 RNASE8Q8TDE3 154 aaKnown RBP19.24■□□□□ 0.67
CPNE1-202ENST00000352393 TPPP3Q9BW30 176 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 S4R3C0 116 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 IGLV11-55A0A075B6I3 123 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 GNG7O60262 68 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 DEFB125Q8N687 156 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 PRSS3P2Q8NHM4 247 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 AAMDCQ9H7C9 122 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 TIMM8BQ9Y5J9 83 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-202ENST00000352393 U3KQK5 164 aa19.24■□□□□ 0.67
CPNE1-202ENST00000352393 S100A7AQ86SG5 101 aa19.23■□□□□ 0.67
CPNE1-202ENST00000352393 FANCD2OSQ96PS1 177 aa19.23■□□□□ 0.67
CPNE1-202ENST00000352393 RIF1Q5UIP0 2472 aaKnown RBP19.23■□□□□ 0.67
CPNE1-202ENST00000352393 A0A096LNJ9 63 aa19.22■□□□□ 0.67
CPNE1-202ENST00000352393 MUC21A0A0G2JKD1 596 aa19.22■□□□□ 0.67
CPNE1-202ENST00000352393 MUC21A0A140T8X8 626 aa19.22■□□□□ 0.67
CPNE1-202ENST00000352393 SERTM2A0A1B0GWG4 89 aa19.22■□□□□ 0.67
CPNE1-202ENST00000352393 NCR2O95944 276 aa19.22■□□□□ 0.67
CPNE1-202ENST00000352393 HIST1H1AQ02539 215 aaPredicted RBP19.22■□□□□ 0.67
CPNE1-202ENST00000352393 MUC21Q5SSG8 566 aa19.22■□□□□ 0.67
CPNE1-202ENST00000352393 VKORC1Q9BQB6 163 aa19.22■□□□□ 0.67
CPNE1-202ENST00000352393 HILPDAQ9Y5L2 63 aa19.22■□□□□ 0.67
CPNE1-202ENST00000352393 NPIPB5A8MRT5 1133 aa19.22■□□□□ 0.67
CPNE1-202ENST00000352393 F8W735 103 aaPredicted RBP19.22■□□□□ 0.67
CPNE1-202ENST00000352393 ARF6P62330 175 aa19.22■□□□□ 0.67
CPNE1-202ENST00000352393 COX8AP10176 69 aa19.21■□□□□ 0.67
CPNE1-202ENST00000352393 C5orf64Q2M2E5 130 aa19.21■□□□□ 0.67
CPNE1-202ENST00000352393 LYZL1Q6UWQ5 148 aa19.21■□□□□ 0.67
CPNE1-202ENST00000352393 COX8CQ7Z4L0 72 aa19.21■□□□□ 0.67
CPNE1-202ENST00000352393 LINC01560Q8TB33 94 aa19.21■□□□□ 0.67
CPNE1-202ENST00000352393 IGFBPL1Q8WX77 278 aa19.21■□□□□ 0.67
CPNE1-202ENST00000352393 ZFHX2Q9C0A1 2572 aaPredicted RBP19.21■□□□□ 0.67
CPNE1-202ENST00000352393 SH2D1AO60880 128 aa19.21■□□□□ 0.67
CPNE1-202ENST00000352393 IFI27P40305 119 aaPredicted RBP19.21■□□□□ 0.67
CPNE1-202ENST00000352393 MFAP4P55083 255 aa19.21■□□□□ 0.67
CPNE1-202ENST00000352393 RHOGP84095 191 aa19.21■□□□□ 0.67
CPNE1-202ENST00000352393 TMEM213A2RRL7 107 aa19.2■□□□□ 0.66
CPNE1-202ENST00000352393 TMEM189A5PLL7 270 aa19.2■□□□□ 0.66
CPNE1-202ENST00000352393 D6R8Y8 96 aa19.2■□□□□ 0.66
CPNE1-202ENST00000352393 FAM106CPP0CH98 169 aa19.2■□□□□ 0.66
CPNE1-202ENST00000352393 FAM106AQ4KMX7 169 aa19.2■□□□□ 0.66
CPNE1-202ENST00000352393 ODF3BA8MYP8 253 aa19.19■□□□□ 0.66
CPNE1-202ENST00000352393 CEACAM3P40198 252 aa19.19■□□□□ 0.66
CPNE1-202ENST00000352393 LOXL1Q08397 574 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-202ENST00000352393 VAMP3Q15836 100 aa19.19■□□□□ 0.66
CPNE1-202ENST00000352393 FAM104BQ5XKR9 115 aa19.19■□□□□ 0.66
CPNE1-202ENST00000352393 C2orf91Q6ZV80 131 aa19.19■□□□□ 0.66
CPNE1-202ENST00000352393 SIGLEC8Q9NYZ4 499 aa19.19■□□□□ 0.66
CPNE1-202ENST00000352393 RBX1P62877 108 aa19.19■□□□□ 0.66
CPNE1-202ENST00000352393 OR4C5Q8NGB2 326 aa19.19■□□□□ 0.66
CPNE1-202ENST00000352393 A0A087X0K7 114 aa19.18■□□□□ 0.66
CPNE1-202ENST00000352393 PSG9Q00887 426 aa19.18■□□□□ 0.66
CPNE1-202ENST00000352393 KLRD1Q13241 179 aa19.18■□□□□ 0.66
CPNE1-202ENST00000352393 PIEZO2Q9H5I5 2752 aa19.18■□□□□ 0.66
CPNE1-202ENST00000352393 TMSB15BA0A087X1C1 80 aa19.18■□□□□ 0.66
CPNE1-202ENST00000352393 AMN1Q8IY45 258 aa19.18■□□□□ 0.66
CPNE1-202ENST00000352393 PRELID3AQ96N28 172 aa19.18■□□□□ 0.66
CPNE1-202ENST00000352393 NDPQ00604 133 aa19.17■□□□□ 0.66
CPNE1-202ENST00000352393 ERASQ7Z444 233 aa19.17■□□□□ 0.66
CPNE1-202ENST00000352393 ARL6IP6Q8N6S5 226 aa19.17■□□□□ 0.66
CPNE1-202ENST00000352393 ARPC1AQ92747 370 aa19.17■□□□□ 0.66
CPNE1-202ENST00000352393 DCHS1Q96JQ0 3298 aa19.17■□□□□ 0.66
CPNE1-202ENST00000352393 IGKV2-40A0A087WW87 121 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-202ENST00000352393 IGKV2D-40P01614 121 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-202ENST00000352393 GPR183P32249 361 aa19.16■□□□□ 0.66
CPNE1-202ENST00000352393 ORMDL3Q8N138 153 aa19.16■□□□□ 0.66
CPNE1-202ENST00000352393 PIP4P2Q8N4L2 257 aa19.16■□□□□ 0.66
CPNE1-202ENST00000352393 DPF1Q92782 380 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms