RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 A8MWL6 223 aa13.06□□□□□ -0.32
PDAP1-201ENST00000350498 IGLV2-11P01706 119 aa13.06□□□□□ -0.32
PDAP1-201ENST00000350498 NHLH1Q02575 133 aa13.06□□□□□ -0.32
PDAP1-201ENST00000350498 TMEM70Q9BUB7 260 aa13.06□□□□□ -0.32
PDAP1-201ENST00000350498 NBR2O15453 112 aa13.06□□□□□ -0.32
PDAP1-201ENST00000350498 Q86TA4 180 aa13.06□□□□□ -0.32
PDAP1-201ENST00000350498 DAZAP1Q96EP5 407 aaKnown RBP13.06□□□□□ -0.32
PDAP1-201ENST00000350498 FOXE3Q13461 319 aa13.05□□□□□ -0.32
PDAP1-201ENST00000350498 ATP5L2Q7Z4Y8 100 aa13.05□□□□□ -0.32
PDAP1-201ENST00000350498 STXBP6Q8NFX7 210 aa13.05□□□□□ -0.32
PDAP1-201ENST00000350498 TPPP3Q9BW30 176 aa13.05□□□□□ -0.32
PDAP1-201ENST00000350498 IGHV3-35A0A0C4DH35 117 aa13.05□□□□□ -0.32
PDAP1-201ENST00000350498 NCBP2LA6PVI3 153 aaKnown RBP13.05□□□□□ -0.32
PDAP1-201ENST00000350498 OVOL3O00110 214 aa13.05□□□□□ -0.32
PDAP1-201ENST00000350498 LINC00614P0C842 121 aa13.05□□□□□ -0.32
PDAP1-201ENST00000350498 FMC1Q96HJ9 113 aa13.05□□□□□ -0.32
PDAP1-201ENST00000350498 RBM14Q96PK6 669 aaKnown RBP13.05□□□□□ -0.32
PDAP1-201ENST00000350498 CFAP46Q8IYW2 2715 aa13.04□□□□□ -0.32
PDAP1-201ENST00000350498 RBPMS2Q6ZRY4 209 aaKnown RBP13.04□□□□□ -0.32
PDAP1-201ENST00000350498 VMO1Q7Z5L0 202 aa13.04□□□□□ -0.32
PDAP1-201ENST00000350498 ZC2HC1AQ96GY0 325 aa13.04□□□□□ -0.32
PDAP1-201ENST00000350498 CHRDL1Q9BU40 450 aa13.04□□□□□ -0.32
PDAP1-201ENST00000350498 M0R3E3 92 aa13.04□□□□□ -0.32
PDAP1-201ENST00000350498 LEPROTL1O95214 131 aa13.04□□□□□ -0.32
PDAP1-201ENST00000350498 ARMS2P0C7Q2 107 aa13.04□□□□□ -0.32
PDAP1-201ENST00000350498 OR11H6Q8NGC7 330 aa13.04□□□□□ -0.32
PDAP1-201ENST00000350498 SPG11Q96JI7 2443 aa13.04□□□□□ -0.32
PDAP1-201ENST00000350498 MUC21A0A0G2JKD1 596 aa13.03□□□□□ -0.32
PDAP1-201ENST00000350498 MUC21A0A140T8X8 626 aa13.03□□□□□ -0.32
PDAP1-201ENST00000350498 SYS1-DBNDD2H3BUS1 97 aa13.03□□□□□ -0.32
PDAP1-201ENST00000350498 CHEK1O14757 476 aa13.03□□□□□ -0.32
PDAP1-201ENST00000350498 IL4P05112 153 aa13.03□□□□□ -0.32
PDAP1-201ENST00000350498 MUC21Q5SSG8 566 aa13.03□□□□□ -0.32
PDAP1-201ENST00000350498 LOC102724200A0A096LPH7 203 aaPredicted RBP13.03□□□□□ -0.32
PDAP1-201ENST00000350498 APOHP02749 345 aaPredicted RBP13.03□□□□□ -0.32
PDAP1-201ENST00000350498 PTTG1IPP53801 180 aa13.03□□□□□ -0.32
PDAP1-201ENST00000350498 MPV17L2Q567V2 206 aa13.03□□□□□ -0.32
PDAP1-201ENST00000350498 FANCD2OSQ96PS1 177 aa13.03□□□□□ -0.32
PDAP1-201ENST00000350498 TMUB1Q9BVT8 246 aa13.03□□□□□ -0.32
PDAP1-201ENST00000350498 FCGR2BP31994 310 aaPredicted RBP13.02□□□□□ -0.32
PDAP1-201ENST00000350498 UQCRFS1P47985 274 aa13.02□□□□□ -0.32
PDAP1-201ENST00000350498 PLP1P60201 277 aa13.02□□□□□ -0.32
PDAP1-201ENST00000350498 ZNF491Q8N8L2 437 aa13.02□□□□□ -0.32
PDAP1-201ENST00000350498 TIMD4Q96H15 378 aa13.02□□□□□ -0.32
PDAP1-201ENST00000350498 MRPS16Q9Y3D3 137 aaKnown RBP13.02□□□□□ -0.32
PDAP1-201ENST00000350498 C20orf202A1L168 122 aa13.02□□□□□ -0.33
PDAP1-201ENST00000350498 ODF3BA8MYP8 253 aa13.02□□□□□ -0.33
PDAP1-201ENST00000350498 FAM106CPP0CH98 169 aa13.02□□□□□ -0.33
PDAP1-201ENST00000350498 FAM106AQ4KMX7 169 aa13.02□□□□□ -0.33
PDAP1-201ENST00000350498 FLNCQ14315 2725 aa13.02□□□□□ -0.33
PDAP1-201ENST00000350498 SNAI2O43623 268 aa13.01□□□□□ -0.33
PDAP1-201ENST00000350498 TCTAP57738 103 aa13.01□□□□□ -0.33
PDAP1-201ENST00000350498 C5orf64Q2M2E5 130 aa13.01□□□□□ -0.33
PDAP1-201ENST00000350498 TMSB15BA0A087X1C1 80 aa13.01□□□□□ -0.33
PDAP1-201ENST00000350498 F8W735 103 aaPredicted RBP13.01□□□□□ -0.33
PDAP1-201ENST00000350498 PRTN3P24158 256 aa13.01□□□□□ -0.33
PDAP1-201ENST00000350498 CRIP1P50238 77 aa13.01□□□□□ -0.33
PDAP1-201ENST00000350498 FXYD7P58549 80 aa13.01□□□□□ -0.33
PDAP1-201ENST00000350498 IGFL4Q6B9Z1 124 aa13.01□□□□□ -0.33
PDAP1-201ENST00000350498 RNASE8Q8TDE3 154 aaKnown RBP13.01□□□□□ -0.33
PDAP1-201ENST00000350498 ZNF492Q9P255 531 aa13.01□□□□□ -0.33
PDAP1-201ENST00000350498 UBTD1Q9HAC8 227 aa13□□□□□ -0.33
PDAP1-201ENST00000350498 COX11Q9Y6N1 276 aa13□□□□□ -0.33
PDAP1-201ENST00000350498 PKD1L2Q7Z442 2459 aa13□□□□□ -0.33
PDAP1-201ENST00000350498 NPIPB6E9PJ23 425 aa13□□□□□ -0.33
PDAP1-201ENST00000350498 C19orf84I3L1E1 186 aa13□□□□□ -0.33
PDAP1-201ENST00000350498 C8orf49Q96NF6 230 aa13□□□□□ -0.33
PDAP1-201ENST00000350498 OTORQ9NRC9 128 aa13□□□□□ -0.33
PDAP1-201ENST00000350498 NDUFA3O95167 84 aa12.99□□□□□ -0.33
PDAP1-201ENST00000350498 RNF125Q96EQ8 232 aa12.99□□□□□ -0.33
PDAP1-201ENST00000350498 NCR2O95944 276 aa12.99□□□□□ -0.33
PDAP1-201ENST00000350498 HOXB4P17483 251 aaPredicted RBP12.99□□□□□ -0.33
PDAP1-201ENST00000350498 CT83Q5H943 113 aa12.99□□□□□ -0.33
PDAP1-201ENST00000350498 NPBQ8NG41 125 aa12.99□□□□□ -0.33
PDAP1-201ENST00000350498 TRBV19A0A075B6N1 114 aa12.98□□□□□ -0.33
PDAP1-201ENST00000350498 OR2T8A6NH00 312 aa12.98□□□□□ -0.33
PDAP1-201ENST00000350498 LOXL1Q08397 574 aaPredicted RBP12.98□□□□□ -0.33
PDAP1-201ENST00000350498 SMIM12Q96EX1 92 aa12.98□□□□□ -0.33
PDAP1-201ENST00000350498 SHANK2-AS3Q9BTD1 123 aa12.98□□□□□ -0.33
PDAP1-201ENST00000350498 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.98□□□□□ -0.33
PDAP1-201ENST00000350498 CRXO43186 299 aaPredicted RBP12.98□□□□□ -0.33
PDAP1-201ENST00000350498 GNG7O60262 68 aa12.98□□□□□ -0.33
PDAP1-201ENST00000350498 NUDT3O95989 172 aa12.98□□□□□ -0.33
PDAP1-201ENST00000350498 LINC01548A6NM66 108 aa12.97□□□□□ -0.33
PDAP1-201ENST00000350498 H3BRN7 92 aa12.97□□□□□ -0.33
PDAP1-201ENST00000350498 EGR2P11161 476 aaPredicted RBP12.97□□□□□ -0.33
PDAP1-201ENST00000350498 PAX2Q02962 417 aa12.97□□□□□ -0.33
PDAP1-201ENST00000350498 SIGLEC15Q6ZMC9 328 aa12.97□□□□□ -0.33
PDAP1-201ENST00000350498 ORAOV1Q8WV07 137 aa12.97□□□□□ -0.33
PDAP1-201ENST00000350498 NEU4Q8WWR8 484 aaPredicted RBP12.97□□□□□ -0.33
PDAP1-201ENST00000350498 RNF5Q99942 180 aa12.97□□□□□ -0.33
PDAP1-201ENST00000350498 LOC389332A0A1B0GUA5 103 aa12.97□□□□□ -0.33
PDAP1-201ENST00000350498 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
PDAP1-201ENST00000350498 SFTPCP11686 197 aa12.97□□□□□ -0.33
PDAP1-201ENST00000350498 ARPC1AQ92747 370 aa12.97□□□□□ -0.33
PDAP1-201ENST00000350498 CHCHD1Q96BP2 118 aaKnown RBP12.97□□□□□ -0.33
PDAP1-201ENST00000350498 NDFIP1Q9BT67 221 aa12.97□□□□□ -0.33
PDAP1-201ENST00000350498 ABCA2Q9BZC7 2435 aa12.96□□□□□ -0.33
PDAP1-201ENST00000350498 IGLV11-55A0A075B6I3 123 aa12.96□□□□□ -0.33
PDAP1-201ENST00000350498 A0A087X0K7 114 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms