RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PSG8Q9UQ74 426 aa14.25□□□□□ -0.13
PTP4A3-202ENST00000349124 HAX1O00165 279 aa14.24□□□□□ -0.13
PTP4A3-202ENST00000349124 FAM106CPP0CH98 169 aa14.24□□□□□ -0.13
PTP4A3-202ENST00000349124 CDSNQ15517 529 aa14.24□□□□□ -0.13
PTP4A3-202ENST00000349124 FAM106AQ4KMX7 169 aa14.24□□□□□ -0.13
PTP4A3-202ENST00000349124 BPIFA4PQ86YQ2 179 aa14.24□□□□□ -0.13
PTP4A3-202ENST00000349124 SCNM1Q9BWG6 230 aa14.24□□□□□ -0.13
PTP4A3-202ENST00000349124 IGHV3OR16-8A0A075B7F1 116 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 HLA-DRB1P01911 266 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 PAX2Q02962 417 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 HES1Q14469 280 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 C16orf54Q6UWD8 224 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 NEU4Q8WWR8 484 aaPredicted RBP14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 CHCHD1Q96BP2 118 aaKnown RBP14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 RNF125Q96EQ8 232 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 SOX21Q9Y651 276 aaPredicted RBP14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 IGF2RP11717 2491 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 AKAP6Q13023 2319 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 A0A1B0GUT8 65 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 H3BRN7 92 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 CRXO43186 299 aaPredicted RBP14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 FOXE3Q13461 319 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 IGFL4Q6B9Z1 124 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 ZNF414Q96IQ9 312 aa14.23□□□□□ -0.13
PTP4A3-202ENST00000349124 MPV17L2Q567V2 206 aa14.22□□□□□ -0.13
PTP4A3-202ENST00000349124 MRPS12O15235 138 aaKnown RBP14.22□□□□□ -0.13
PTP4A3-202ENST00000349124 IGHV3-35A0A0C4DH35 117 aa14.21□□□□□ -0.13
PTP4A3-202ENST00000349124 SPTBN1Q01082 2364 aaKnown RBP14.21□□□□□ -0.13
PTP4A3-202ENST00000349124 FAM231BA6NCW3 169 aa14.21□□□□□ -0.13
PTP4A3-202ENST00000349124 FXYD7P58549 80 aa14.21□□□□□ -0.13
PTP4A3-202ENST00000349124 PSG3Q16557 428 aa14.21□□□□□ -0.13
PTP4A3-202ENST00000349124 NBR2O15453 112 aa14.21□□□□□ -0.14
PTP4A3-202ENST00000349124 PTTG1IPP53801 180 aa14.21□□□□□ -0.14
PTP4A3-202ENST00000349124 LOXL1Q08397 574 aaPredicted RBP14.21□□□□□ -0.14
PTP4A3-202ENST00000349124 FANCD2OSQ96PS1 177 aa14.21□□□□□ -0.14
PTP4A3-202ENST00000349124 LOC389332A0A1B0GUA5 103 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 TMEM213A2RRL7 107 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 NCR2O95944 276 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 NDPQ00604 133 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 CFHR4Q92496 578 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 DPM3Q9P2X0 92 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 COL6A6A6NMZ7 2263 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 C20orf202A1L168 122 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 SNAI2O43623 268 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 GNG7O60262 68 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 LIPFP07098 398 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 DYNAPQ8N1N2 210 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 ARL6IP6Q8N6S5 226 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 COX11Q9Y6N1 276 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 ZFHX3Q15911 3703 aa14.2□□□□□ -0.14
PTP4A3-202ENST00000349124 SERTM2A0A1B0GWG4 89 aa14.19□□□□□ -0.14
PTP4A3-202ENST00000349124 FOXC1Q12948 553 aa14.19□□□□□ -0.14
PTP4A3-202ENST00000349124 TMEM75Q8N9X5 138 aa14.19□□□□□ -0.14
PTP4A3-202ENST00000349124 C1RLQ9NZP8 487 aa14.19□□□□□ -0.14
PTP4A3-202ENST00000349124 IGKV2-40A0A087WW87 121 aaPredicted RBP14.19□□□□□ -0.14
PTP4A3-202ENST00000349124 IGKV2D-40P01614 121 aaPredicted RBP14.19□□□□□ -0.14
PTP4A3-202ENST00000349124 FAM162BQ5T6X4 162 aa14.19□□□□□ -0.14
PTP4A3-202ENST00000349124 VKORC1Q9BQB6 163 aa14.19□□□□□ -0.14
PTP4A3-202ENST00000349124 F8W735 103 aaPredicted RBP14.18□□□□□ -0.14
PTP4A3-202ENST00000349124 NUDT3O95989 172 aa14.18□□□□□ -0.14
PTP4A3-202ENST00000349124 ORAOV1Q8WV07 137 aa14.18□□□□□ -0.14
PTP4A3-202ENST00000349124 MAP1LC3CQ9BXW4 147 aa14.18□□□□□ -0.14
PTP4A3-202ENST00000349124 NCBP2LA6PVI3 153 aaKnown RBP14.18□□□□□ -0.14
PTP4A3-202ENST00000349124 IFI27P40305 119 aaPredicted RBP14.18□□□□□ -0.14
PTP4A3-202ENST00000349124 TCTAP57738 103 aa14.18□□□□□ -0.14
PTP4A3-202ENST00000349124 LY6G5BQ8NDX9 201 aa14.18□□□□□ -0.14
PTP4A3-202ENST00000349124 WI2-2373I1.2A0A1W2PRP0 233 aa14.17□□□□□ -0.14
PTP4A3-202ENST00000349124 HLA-DMBP28068 263 aa14.17□□□□□ -0.14
PTP4A3-202ENST00000349124 RIGQ13278 110 aa14.17□□□□□ -0.14
PTP4A3-202ENST00000349124 LYZL1Q6UWQ5 148 aa14.17□□□□□ -0.14
PTP4A3-202ENST00000349124 OR5AL1P0C617 328 aa14.17□□□□□ -0.14
PTP4A3-202ENST00000349124 PRSS3P2Q8NHM4 247 aa14.17□□□□□ -0.14
PTP4A3-202ENST00000349124 RNF5Q99942 180 aa14.17□□□□□ -0.14
PTP4A3-202ENST00000349124 ST20Q9HBF5 79 aa14.17□□□□□ -0.14
PTP4A3-202ENST00000349124 AMN1Q8IY45 258 aa14.16□□□□□ -0.14
PTP4A3-202ENST00000349124 Q8TAT8 98 aa14.16□□□□□ -0.14
PTP4A3-202ENST00000349124 TMEM191AQ9H0A3 160 aa14.16□□□□□ -0.14
PTP4A3-202ENST00000349124 AP5S1Q9NUS5 200 aa14.16□□□□□ -0.14
PTP4A3-202ENST00000349124 OR2T8A6NH00 312 aa14.16□□□□□ -0.14
PTP4A3-202ENST00000349124 C5orf64Q2M2E5 130 aa14.16□□□□□ -0.14
PTP4A3-202ENST00000349124 A0A087X0K7 114 aa14.15□□□□□ -0.14
PTP4A3-202ENST00000349124 K7EQM0 130 aa14.15□□□□□ -0.14
PTP4A3-202ENST00000349124 ZNF738Q8NE65 137 aa14.15□□□□□ -0.14
PTP4A3-202ENST00000349124 D6R8Y8 96 aa14.15□□□□□ -0.14
PTP4A3-202ENST00000349124 SLC25A34Q6PIV7 304 aa14.15□□□□□ -0.14
PTP4A3-202ENST00000349124 TRBV6-1A0A0K0K1D8 114 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 OR11H6Q8NGC7 330 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 ZNF747Q9BV97 191 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 CELSR1Q9NYQ6 3014 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 IGLV11-55A0A075B6I3 123 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 SMKR1H3BMG3 65 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 SH2D1AO60880 128 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 RNASE8Q8TDE3 154 aaKnown RBP14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 SCRT2Q9NQ03 307 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 A0A096LNJ9 63 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 NDUFA3O95167 84 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 ZNF80P51504 273 aaPredicted RBP14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 UBE2V1Q13404 147 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 C21orf62-AS1Q17RA5 79 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 PET117Q6UWS5 81 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms