RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 OR10J3Q5JRS4 329 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 PRNTQ86SH4 94 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 SMAD5-AS1Q9Y6J3 95 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 PKD1L2Q7Z442 2459 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 IGLC2P0DOY2 106 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 LOXL1Q08397 574 aaPredicted RBP4.73□□□□□ -1.65
CLCN3-201ENST00000347613 C11orf71Q6IPW1 123 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 SIGLEC15Q6ZMC9 328 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 SIGLECL1Q8N7X8 197 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 STPG4Q8N801 248 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 OR1L4Q8NGR5 311 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 GLMPQ8WWB7 406 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 GPR82Q96P67 336 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 SPG11Q96JI7 2443 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 CACNA1AO00555 2505 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 TCAPO15273 167 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 TOMM40O96008 361 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 PLP1P60201 277 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 PIP4P2Q8N4L2 257 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 WIPF2Q8TF74 440 aaPredicted RBP4.73□□□□□ -1.65
CLCN3-201ENST00000347613 RPEQ96AT9 228 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 C20orf144Q9BQM9 153 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 MIEN1Q9BRT3 115 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 C1RLQ9NZP8 487 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 POLQO75417 2590 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 TNFRSF6BO95407 300 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 ARMS2P0C7Q2 107 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 CA7P43166 264 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 ZNF80P51504 273 aaPredicted RBP4.72□□□□□ -1.65
CLCN3-201ENST00000347613 ATP5IP56385 69 aaPredicted RBP4.72□□□□□ -1.65
CLCN3-201ENST00000347613 BATFQ16520 125 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 SPATA45Q537H7 98 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 Q86TA4 180 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 PMCHL2Q9BQD1 86 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 CHRDL1Q9BU40 450 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 FAM181BA6NEQ2 426 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 ODF3BA8MYP8 253 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 NPIPB6E9PJ23 425 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 C19orf84I3L1E1 186 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 SUB1P53999 127 aaKnown RBP eCLIP4.72□□□□□ -1.65
CLCN3-201ENST00000347613 TMEM75Q8N9X5 138 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 RPP21Q9H633 154 aaKnown RBP4.72□□□□□ -1.65
CLCN3-201ENST00000347613 TRBV19A0A075B6N1 114 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 TRBV9A0A0B4J1U6 114 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 IGHV1-24A0A0C4DH33 117 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 HLA-DQA1P01909 254 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 IL4P05112 153 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 IGLC3P0DOY3 106 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 IGLL1P15814 213 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 FCGR2BP31994 310 aaPredicted RBP4.72□□□□□ -1.65
CLCN3-201ENST00000347613 UBE2G1P62253 170 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 LY6DQ14210 128 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 Q56UQ5 140 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 RNASEKQ6P5S7 137 aaKnown RBP4.72□□□□□ -1.65
CLCN3-201ENST00000347613 ZNF331Q9NQX6 463 aaPredicted RBP4.72□□□□□ -1.65
CLCN3-201ENST00000347613 HIGD1AQ9Y241 93 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 SELENOKQ9Y6D0 94 aa4.72□□□□□ -1.65
CLCN3-201ENST00000347613 OR2J3O76001 311 aa4.71□□□□□ -1.65
CLCN3-201ENST00000347613 CNIH1O95406 144 aa4.71□□□□□ -1.65
CLCN3-201ENST00000347613 NCR2O95944 276 aa4.71□□□□□ -1.65
CLCN3-201ENST00000347613 RBPJQ06330 500 aa4.71□□□□□ -1.65
CLCN3-201ENST00000347613 KLF5Q13887 457 aaPredicted RBP4.71□□□□□ -1.65
CLCN3-201ENST00000347613 PLGLAQ15195 96 aa4.71□□□□□ -1.65
CLCN3-201ENST00000347613 ERASQ7Z444 233 aa4.71□□□□□ -1.65
CLCN3-201ENST00000347613 VAMP8Q9BV40 100 aa4.71□□□□□ -1.65
CLCN3-201ENST00000347613 TEX15Q9BXT5 2789 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 ACACBO00763 2458 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 TMSB15BA0A087X1C1 80 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 hDV102S1A0JD36 115 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 OR2T8A6NH00 312 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 H3BRN7 92 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 M0R143 59 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 ZNF25P17030 456 aaPredicted RBP4.71□□□□□ -1.66
CLCN3-201ENST00000347613 VMO1Q7Z5L0 202 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 OR11H6Q8NGC7 330 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 OR8B3Q8NGG8 313 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 Q8TAT8 98 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 RNASE8Q8TDE3 154 aaKnown RBP4.71□□□□□ -1.66
CLCN3-201ENST00000347613 OR8B2Q96RD0 313 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 TMEM208Q9BTX3 173 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 LPAR2Q9HBW0 351 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 IGLV11-55A0A075B6I3 123 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 IGHV3OR16-13A0A075B7E8 117 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 IGKV2-40A0A087WW87 121 aaPredicted RBP4.71□□□□□ -1.66
CLCN3-201ENST00000347613 A0A096LNJ9 63 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 IGHV3-74A0A0B4J1X5 117 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 IGHV3-66A0A0C4DH42 116 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 WI2-2373I1.2A0A1W2PRP0 233 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 TMEM213A2RRL7 107 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 PRAC2D3DTV9 90 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 NDUFA3O95167 84 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 IGKV2D-40P01614 121 aaPredicted RBP4.71□□□□□ -1.66
CLCN3-201ENST00000347613 UQCRFS1P47985 274 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 PAX2Q02962 417 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 C5orf17Q8NAS9 161 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 OR4F17Q8NGA8 305 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 RASL11BQ9BPW5 248 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 SHANK2-AS3Q9BTD1 123 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 NGBQ9NPG2 151 aa4.71□□□□□ -1.66
CLCN3-201ENST00000347613 NBR2O15453 112 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms