RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 NUP35Q8NFH5 326 aa10.54□□□□□ -0.72
CASC4-202ENST00000345795 A0A1W2PRE2 83 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 F5H697 171 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 IGHV2-5P01817 119 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 TCRAP04437 139 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 EVI2AP22794 236 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 DDTP30046 118 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 SLAQ13239 276 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 C8orf46Q8TAG6 207 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 DUX3Q96PT4 197 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 CSMD2Q7Z408 3487 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 TMEM189A5PLL7 270 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 M0R381 172 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 IGLC1P0CG04 106 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 HIST1H1AQ02539 215 aaPredicted RBP10.53□□□□□ -0.72
CASC4-202ENST00000345795 TDRG1Q3Y452 100 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 ITLN2Q8WWU7 325 aaPredicted RBP10.53□□□□□ -0.72
CASC4-202ENST00000345795 IGHV3OR16-12A0A075B7B8 117 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 IGHV4-39P01824 125 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 OR5AL1P0C617 328 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 Q6ZN92 141 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 CDC42EP3Q9UKI2 254 aa10.53□□□□□ -0.72
CASC4-202ENST00000345795 BMPR1BO00238 502 aa10.52□□□□□ -0.72
CASC4-202ENST00000345795 NPFFO15130 113 aa10.52□□□□□ -0.72
CASC4-202ENST00000345795 IGKV1-17P01599 117 aa10.52□□□□□ -0.72
CASC4-202ENST00000345795 MGPP08493 103 aa10.52□□□□□ -0.72
CASC4-202ENST00000345795 FOLR2P14207 255 aa10.52□□□□□ -0.72
CASC4-202ENST00000345795 HRNRQ86YZ3 2850 aaPredicted RBP10.52□□□□□ -0.72
CASC4-202ENST00000345795 FXYD5Q96DB9 178 aa10.52□□□□□ -0.73
CASC4-202ENST00000345795 BEX4Q9NWD9 120 aaPredicted RBP10.52□□□□□ -0.73
CASC4-202ENST00000345795 TEX15Q9BXT5 2789 aa10.52□□□□□ -0.73
CASC4-202ENST00000345795 HSBP1L1C9JCN9 74 aa10.52□□□□□ -0.73
CASC4-202ENST00000345795 PSG8Q9UQ74 426 aa10.52□□□□□ -0.73
CASC4-202ENST00000345795 DLX6P56179 175 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 ATP5G2Q06055 141 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 KAAG1Q9UBP8 84 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 VWC2Q2TAL6 325 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 WDR73Q6P4I2 378 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 TMEM116Q8NCL8 245 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 NF1P21359 2839 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 SFTPCP11686 197 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 FCER1GP30273 86 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 METTL26Q96S19 204 aa10.51□□□□□ -0.73
CASC4-202ENST00000345795 PRSS46E5RG02 174 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 TMEM30BQ3MIR4 351 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 FAM74A4Q5TZK3 123 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 SPANXN1Q5VSR9 72 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 RPP21Q9H633 154 aaKnown RBP10.5□□□□□ -0.73
CASC4-202ENST00000345795 V9GYV3 84 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 IGKV1D-37A0A075B6S9 117 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 F6UB75 175 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 ARMS2P0C7Q2 107 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 HINT1P49773 126 aaPredicted RBP10.5□□□□□ -0.73
CASC4-202ENST00000345795 FAM71F2Q6NXP2 309 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 S100A7AQ86SG5 101 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 FAM167A-AS1Q96KT0 104 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 NRN1Q9NPD7 142 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 JKAMPQ9P055 326 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 ATRQ13535 2644 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 RPL7P18124 248 aaKnown RBP10.5□□□□□ -0.73
CASC4-202ENST00000345795 MAJINQ3KP22 176 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 PIP4P2Q8N4L2 257 aa10.5□□□□□ -0.73
CASC4-202ENST00000345795 GCN1Q92616 2671 aaKnown RBP10.5□□□□□ -0.73
CASC4-202ENST00000345795 TMEM213A2RRL7 107 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 CR1LQ2VPA4 569 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 LINC00322Q6ZN03 302 aaPredicted RBP10.49□□□□□ -0.73
CASC4-202ENST00000345795 TXNDC17Q9BRA2 123 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.49□□□□□ -0.73
CASC4-202ENST00000345795 TEX22C9J3V5 150 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 K7EIM0 57 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 ITGB1BP1O14713 200 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 HOXB4P17483 251 aaPredicted RBP10.49□□□□□ -0.73
CASC4-202ENST00000345795 CKS2P33552 79 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 HLA-DQA1P01909 254 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 TMEM78Q5T7P6 136 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 CENPVQ7Z7K6 275 aaPredicted RBP10.49□□□□□ -0.73
CASC4-202ENST00000345795 ZNF664Q8N3J9 261 aa10.49□□□□□ -0.73
CASC4-202ENST00000345795 HBBP68871 147 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 POU2AF1Q16633 256 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 BEND2Q8NDZ0 799 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 BTF3P20290 206 aaKnown RBP10.48□□□□□ -0.73
CASC4-202ENST00000345795 HNRNPA3P51991 378 aaKnown RBP10.48□□□□□ -0.73
CASC4-202ENST00000345795 TM4SF20Q53R12 229 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 ZNF562Q6V9R5 426 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 VGLL1Q99990 258 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 C19orf24Q9BVV8 132 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 TP73-AS1Q9UF72 201 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 C9JCJ5 164 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 OVOL3O00110 214 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 CTAG1AP78358 180 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 C3orf36Q3SXR2 165 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 SPATA45Q537H7 98 aa10.48□□□□□ -0.73
CASC4-202ENST00000345795 ZNF491Q8N8L2 437 aa10.47□□□□□ -0.73
CASC4-202ENST00000345795 TRGV9Q99603 122 aa10.47□□□□□ -0.73
CASC4-202ENST00000345795 TMEM242Q9NWH2 141 aa10.47□□□□□ -0.73
CASC4-202ENST00000345795 TRBV12-3P01733 135 aa10.47□□□□□ -0.73
CASC4-202ENST00000345795 PRSS1P07477 247 aa10.47□□□□□ -0.73
CASC4-202ENST00000345795 PKIAP61925 76 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms