RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MRPL35Q9NZE8 188 aaKnown RBP9.82□□□□□ -0.84
COL12A1-202ENST00000345356 CHD3Q12873 2000 aaKnown RBP9.82□□□□□ -0.84
COL12A1-202ENST00000345356 TRAV26-1A0A087WT03 109 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 CRPP02741 224 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 PCP2Q8IVA1 136 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 BRCA1P38398 1863 aaKnown RBP9.82□□□□□ -0.84
COL12A1-202ENST00000345356 PTPRZ1P23471 2315 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-202ENST00000345356 IGHV3OR16-10A0A075B7F0 116 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 C17orf100A8MU93 164 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 S100A7L2Q5SY68 101 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 ARTNQ5T4W7 220 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 C15orf53Q8NAA6 179 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 ZC2HC1AQ96GY0 325 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-202ENST00000345356 ZNF747Q9BV97 191 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 DOCK9Q9BZ29 2069 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 B9A039 149 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 TRACP01848 142 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 Q8N8P6 123 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 CEP250Q9BV73 2442 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 H0YJW9 148 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 CCL21O00585 134 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 IGHV3-11P01762 117 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 LINC00158P58513 81 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 ZNF876PQ49A33 203 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 TIMM21Q9BVV7 248 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 SCN10AQ9Y5Y9 1956 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 G3V4G9 280 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 FOXL2NBQ6ZUU3 175 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 MORN5Q5VZ52 161 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 TMEM75Q8N9X5 138 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 FAM168AQ92567 244 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 SPXQ9BT56 116 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 PINLYPA6NC86 204 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 OVOL1O14753 267 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 TIMM23O14925 209 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 IGKV1-16P04430 117 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 CRYBA4P53673 196 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 C8orf49Q96NF6 230 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 PRO1854Q9UHT4 67 aa9.81□□□□□ -0.84
COL12A1-202ENST00000345356 WIPF2Q8TF74 440 aaPredicted RBP9.8□□□□□ -0.84
COL12A1-202ENST00000345356 PRADC1Q9BSG0 188 aa9.8□□□□□ -0.84
COL12A1-202ENST00000345356 SCRT2Q9NQ03 307 aa9.8□□□□□ -0.84
COL12A1-202ENST00000345356 NDUFS7O75251 213 aa9.8□□□□□ -0.84
COL12A1-202ENST00000345356 SIGLEC15Q6ZMC9 328 aa9.8□□□□□ -0.84
COL12A1-202ENST00000345356 C9orf106Q8NAJ2 232 aa9.8□□□□□ -0.84
COL12A1-202ENST00000345356 NTN5Q8WTR8 489 aaPredicted RBP9.8□□□□□ -0.84
COL12A1-202ENST00000345356 LINC01587Q99440 93 aa9.8□□□□□ -0.84
COL12A1-202ENST00000345356 PHF3Q92576 2039 aaKnown RBP9.8□□□□□ -0.84
COL12A1-202ENST00000345356 PRSS47A8MTI9 375 aa9.8□□□□□ -0.84
COL12A1-202ENST00000345356 ZCCHC24Q8N2G6 241 aaKnown RBP9.8□□□□□ -0.84
COL12A1-202ENST00000345356 SBF1O95248 1867 aa9.8□□□□□ -0.84
COL12A1-202ENST00000345356 C2orf66Q6UXQ4 117 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 IGHV1-18A0A0C4DH31 117 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 SPAARA0A1B0GVQ0 90 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 NPYP01303 97 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 APOBEC3AP31941 199 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-202ENST00000345356 CFAP161Q6P656 301 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 NEGR1Q7Z3B1 354 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 MYLKQ15746 1914 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 LINC00173Q6ZV60 143 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 CITED2Q99967 270 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-202ENST00000345356 TMEM14BQ9NUH8 114 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-202ENST00000345356 BSPH1Q075Z2 132 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 SPANXDQ9BXN6 97 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 WFDC2Q14508 124 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 Q8NFD4 153 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 DOCK8Q8NF50 2099 aa9.79□□□□□ -0.84
COL12A1-202ENST00000345356 IGLL5B9A064 214 aa9.78□□□□□ -0.84
COL12A1-202ENST00000345356 SHANK2-AS3Q9BTD1 123 aa9.78□□□□□ -0.84
COL12A1-202ENST00000345356 GHRHP01286 108 aa9.78□□□□□ -0.84
COL12A1-202ENST00000345356 HLA-DRB4P13762 266 aa9.78□□□□□ -0.84
COL12A1-202ENST00000345356 ERCC8Q13216 396 aa9.78□□□□□ -0.84
COL12A1-202ENST00000345356 HLA-DRB4X5D2U9 266 aa9.78□□□□□ -0.84
COL12A1-202ENST00000345356 INAFM2P0DMQ5 153 aa9.78□□□□□ -0.84
COL12A1-202ENST00000345356 TMEM86BQ8N661 226 aa9.78□□□□□ -0.84
COL12A1-202ENST00000345356 PAX4O43316 350 aa9.77□□□□□ -0.84
COL12A1-202ENST00000345356 WISP1O95388 367 aa9.77□□□□□ -0.84
COL12A1-202ENST00000345356 OVOL2Q9BRP0 275 aa9.77□□□□□ -0.84
COL12A1-202ENST00000345356 TP53TG1Q9Y2A0 90 aa9.77□□□□□ -0.84
COL12A1-202ENST00000345356 FOXI2Q6ZQN5 318 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 CENPVQ7Z7K6 275 aaPredicted RBP9.77□□□□□ -0.85
COL12A1-202ENST00000345356 IGHV1-46P01743 117 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 C8orf86Q6ZUL3 223 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 TRPM7Q96QT4 1865 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 AKAP6Q13023 2319 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 C9orf172C9J069 976 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 ANKRD39Q53RE8 183 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 TMEM200BQ69YZ2 307 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 FAM57AQ8TBR7 257 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 ITLN2Q8WWU7 325 aaPredicted RBP9.77□□□□□ -0.85
COL12A1-202ENST00000345356 SRD5A1P18405 259 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 FDCSPQ8NFU4 85 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 SIP14410 1827 aa9.77□□□□□ -0.85
COL12A1-202ENST00000345356 IGKV1D-17A0A075B6S4 117 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 PRSS29PA6NIE9 313 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 HLA-DMBP28068 263 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 F8VRH5 84 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 LEPROTO15243 131 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms