RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 FUT9Q9Y231 359 aa8.81□□□□□ -1
SNCA-202ENST00000345009 A0A087X0K7 114 aa8.8□□□□□ -1
SNCA-202ENST00000345009 LOC102724200A0A096LPH7 203 aaPredicted RBP8.8□□□□□ -1
SNCA-202ENST00000345009 NHLRC4P0CG21 123 aaPredicted RBP8.8□□□□□ -1
SNCA-202ENST00000345009 ATP6V0CP27449 155 aa8.8□□□□□ -1
SNCA-202ENST00000345009 APOC4P55056 127 aa8.8□□□□□ -1
SNCA-202ENST00000345009 GCSAMLQ5JQS6 135 aa8.8□□□□□ -1
SNCA-202ENST00000345009 SPATA31B1PQ5VZV4 182 aa8.8□□□□□ -1
SNCA-202ENST00000345009 LCN15Q6UWW0 184 aa8.8□□□□□ -1
SNCA-202ENST00000345009 STHQ8IWL8 128 aa8.8□□□□□ -1
SNCA-202ENST00000345009 OR10G4Q8NGN3 311 aa8.8□□□□□ -1
SNCA-202ENST00000345009 OR10G9Q8NGN4 311 aa8.8□□□□□ -1
SNCA-202ENST00000345009 OR10G7Q8NGN6 311 aa8.8□□□□□ -1
SNCA-202ENST00000345009 RPRMQ9NS64 109 aa8.8□□□□□ -1
SNCA-202ENST00000345009 TMEM14CQ9P0S9 112 aa8.8□□□□□ -1
SNCA-202ENST00000345009 BCL2L11O43521 198 aa8.79□□□□□ -1
SNCA-202ENST00000345009 ZFP69Q49AA0 526 aa8.79□□□□□ -1
SNCA-202ENST00000345009 KHDC3LQ587J8 217 aa8.79□□□□□ -1
SNCA-202ENST00000345009 AKR1C8PQ5T2L2 129 aa8.79□□□□□ -1
SNCA-202ENST00000345009 EIF5AL1Q6IS14 154 aaKnown RBP8.79□□□□□ -1
SNCA-202ENST00000345009 EBLN2Q6P2I7 272 aa8.79□□□□□ -1
SNCA-202ENST00000345009 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.79□□□□□ -1
SNCA-202ENST00000345009 TMUB2Q71RG4 321 aa8.79□□□□□ -1
SNCA-202ENST00000345009 APRG1Q8IVJ8 170 aa8.79□□□□□ -1
SNCA-202ENST00000345009 SLC50A1Q9BRV3 221 aa8.79□□□□□ -1
SNCA-202ENST00000345009 ZNF471Q9BX82 626 aaPredicted RBP8.79□□□□□ -1
SNCA-202ENST00000345009 TGP01266 2768 aa8.78□□□□□ -1
SNCA-202ENST00000345009 NBEAL2Q6ZNJ1 2754 aa8.78□□□□□ -1
SNCA-202ENST00000345009 TRAV5A0A0B4J249 113 aa8.78□□□□□ -1
SNCA-202ENST00000345009 A0A1B0GVG6 124 aa8.78□□□□□ -1
SNCA-202ENST00000345009 OR7C2O60412 319 aa8.78□□□□□ -1
SNCA-202ENST00000345009 HIST1H1EP10412 219 aaKnown RBP8.78□□□□□ -1
SNCA-202ENST00000345009 NUTF2P61970 127 aaKnown RBP8.78□□□□□ -1
SNCA-202ENST00000345009 PSG9Q00887 426 aa8.78□□□□□ -1
SNCA-202ENST00000345009 PDE6HQ13956 83 aa8.78□□□□□ -1
SNCA-202ENST00000345009 MIR17HGQ75NE6 70 aa8.78□□□□□ -1
SNCA-202ENST00000345009 FAM24BQ8N5W8 94 aa8.78□□□□□ -1
SNCA-202ENST00000345009 PAXXQ9BUH6 204 aa8.78□□□□□ -1
SNCA-202ENST00000345009 ACTR3CQ9C0K3 210 aaPredicted RBP8.78□□□□□ -1
SNCA-202ENST00000345009 WFDC10AQ9H1F0 79 aa8.78□□□□□ -1
SNCA-202ENST00000345009 OR51M1Q9H341 326 aa8.78□□□□□ -1
SNCA-202ENST00000345009 ZMAT4Q9H898 229 aa8.78□□□□□ -1
SNCA-202ENST00000345009 KIR2DL5BA0A0G2JN68 375 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 KIR2DL5BA0A0G2JPC4 375 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 UBE2CO00762 179 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 SOCS3O14543 225 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 MRPS12O15235 138 aaKnown RBP8.77□□□□□ -1.01
SNCA-202ENST00000345009 ZNF253O75346 499 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 IGLC2P0DOY2 106 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 SPP1P10451 314 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 TPT1P13693 172 aaKnown RBP8.77□□□□□ -1.01
SNCA-202ENST00000345009 TMEM41BQ5BJD5 291 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 ACTL10Q5JWF8 245 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 MORN5Q5VZ52 161 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 PQLC2Q6ZP29 291 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 KIR2DL5AQ8N109 375 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 KIR2DL5BQ8NHK3 375 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 AAMDCQ9H7C9 122 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 CYTL1Q9NRR1 136 aa8.77□□□□□ -1.01
SNCA-202ENST00000345009 RBMY1BA6NDE4 496 aaKnown RBP8.76□□□□□ -1.01
SNCA-202ENST00000345009 RBMY1EA6NEQ0 496 aaKnown RBP8.76□□□□□ -1.01
SNCA-202ENST00000345009 UMAD1C9J7I0 102 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 NBEAP1P0C6P0 100 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 RBMY1DP0C7P1 496 aaKnown RBP8.76□□□□□ -1.01
SNCA-202ENST00000345009 SEC11BP0C7V7 166 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 CDC34P49427 236 aaPredicted RBP8.76□□□□□ -1.01
SNCA-202ENST00000345009 RAB2AP61019 212 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 HAGHQ16775 308 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 FAM122CQ6P4D5 195 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 LINC00322Q6ZN03 302 aaPredicted RBP8.76□□□□□ -1.01
SNCA-202ENST00000345009 FOXI2Q6ZQN5 318 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 BAP18Q8IXM2 172 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 ZNF738Q8NE65 137 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 RNF141Q8WVD5 230 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 SLC25A2Q9BXI2 301 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 CSTL1Q9H114 145 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 SH3BGRL3Q9H299 93 aa8.76□□□□□ -1.01
SNCA-202ENST00000345009 ZNF331Q9NQX6 463 aaPredicted RBP8.76□□□□□ -1.01
SNCA-202ENST00000345009 TRBV19A0A075B6N1 114 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 H3BQ15 152 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 DUSP14O95147 198 aaKnown RBP8.75□□□□□ -1.01
SNCA-202ENST00000345009 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
SNCA-202ENST00000345009 UBE2L3P68036 154 aaKnown RBP8.75□□□□□ -1.01
SNCA-202ENST00000345009 PSG3Q16557 428 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 LGALSLQ3ZCW2 172 aaPredicted RBP8.75□□□□□ -1.01
SNCA-202ENST00000345009 MORN3Q6PF18 240 aaPredicted RBP8.75□□□□□ -1.01
SNCA-202ENST00000345009 SBSPONQ8IVN8 264 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 BLNKQ8WV28 456 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 RAB24Q969Q5 203 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 FAM167A-AS1Q96KT0 104 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 ASCL2Q99929 193 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 SPATA25Q9BR10 227 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 SAV1Q9H4B6 383 aaPredicted RBP8.75□□□□□ -1.01
SNCA-202ENST00000345009 ZNF586Q9NXT0 402 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 PRELID1Q9Y255 219 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 RFNGQ9Y644 331 aa8.75□□□□□ -1.01
SNCA-202ENST00000345009 TRAV8-2A0A0B4J237 113 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 KNCNA6PVL3 124 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 CXorf1O96002 111 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 PYYP10082 97 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms