RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 A0A1W2PRD5 423 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 A0A1W2PRF3 423 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 A0A1W2PRM7 423 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 GAGE12JA6NER3 117 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 GAGE7O76087 117 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 APOA2P02652 100 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 GAGE12FP0CL80 117 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 GAGE12GP0CL81 117 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 GAGE12IP0CL82 117 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 ATP5G3P48201 142 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 GAGE4Q13068 117 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 MRPL23Q16540 153 aaKnown RBP5.78□□□□□ -1.48
ZNF540-202ENST00000343599 FAM162BQ5T6X4 162 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 CARD17Q5XLA6 110 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 LINC00311Q8N616 119 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 HDHD3Q9BSH5 251 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-202ENST00000343599 PBOV1Q9GZY1 135 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-202ENST00000343599 TECRQ9NZ01 308 aaKnown RBP5.78□□□□□ -1.48
ZNF540-202ENST00000343599 DOCK11Q5JSL3 2073 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 ADARB2-AS1A8MUL3 147 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 RER1O15258 196 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 HMGB3O15347 200 aaKnown RBP5.78□□□□□ -1.48
ZNF540-202ENST00000343599 NDUFS7O75251 213 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 IGHV3-7P01780 117 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 VDAC2P45880 294 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-202ENST00000343599 ZNF146Q15072 292 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 Q6ZSV7 163 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 C6orf201Q7Z4U5 140 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 TBC1D26Q86UD7 250 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 OR2T6Q8NHC8 308 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 ATP6V0E2Q8NHE4 81 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 GTSF1Q8WW33 167 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 H1FXQ92522 213 aaKnown RBP5.78□□□□□ -1.48
ZNF540-202ENST00000343599 PPDPFQ9H3Y8 114 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 RABAC1Q9UI14 185 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 SPTBN2O15020 2390 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 LCE6AA0A183 80 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 ANGPTL7O43827 346 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 CCL1P22362 96 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 FCGR2BP31994 310 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-202ENST00000343599 XGP55808 180 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 Q6AWC8 147 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 LINC00596Q86U02 117 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 ZNF645Q8N7E2 425 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 OR1L1Q8NH94 360 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 NAV2Q8IVL1 2488 aa5.78□□□□□ -1.48
ZNF540-202ENST00000343599 CELSR2Q9HCU4 2923 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 ANKHD1Q8IWZ3 2542 aaKnown RBP5.77□□□□□ -1.49
ZNF540-202ENST00000343599 PIEZO2Q9H5I5 2752 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 SMIM27A0A1W2PRY6 76 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 H3BP45 60 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 ZNHIT1O43257 154 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 AVPP01185 164 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 CTLA4P16410 223 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 DLX6P56179 175 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 CLRN1P58418 232 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 CATR1Q13166 79 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 TIGITQ495A1 244 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 OR4X2Q8NGF9 303 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 OR9G4Q8NGQ1 327 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF837Q96EG3 531 aaPredicted RBP5.77□□□□□ -1.49
ZNF540-202ENST00000343599 URB1-AS1Q96HZ7 61 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 OR1A1Q9P1Q5 309 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 PRO0461Q9UI25 63 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 POLDIP2Q9Y2S7 368 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF407Q9C0G0 2248 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 FLNBO75369 2602 aaKnown RBP5.77□□□□□ -1.49
ZNF540-202ENST00000343599 PIGBOS1A0A0B4J2F0 54 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 F5H5K5 113 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 OR2J3O76001 311 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 OR7C1O76099 320 aaPredicted RBP5.77□□□□□ -1.49
ZNF540-202ENST00000343599 CT45A6P0DMU7 189 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 CT45A5P0DMU8 189 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 CT45A7P0DMV0 189 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF137PP52743 207 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 CT45A1Q5HYN5 189 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 DMRTC1Q5HYR2 192 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 LINC01545Q5VT33 79 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 TEX45Q8NA69 505 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.77□□□□□ -1.49
ZNF540-202ENST00000343599 CT45A3Q8NHU0 189 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 C20orf78Q9BR46 151 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 PSENENQ9NZ42 101 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 RPUSD1Q9UJJ7 312 aaKnown RBP5.77□□□□□ -1.49
ZNF540-202ENST00000343599 HILPDAQ9Y5L2 63 aa5.77□□□□□ -1.49
ZNF540-202ENST00000343599 UBE2L5PA0A1B0GUS4 154 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 H0Y980 276 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 NPFFO15130 113 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 SMIM13P0DJ93 91 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 IGHV1-8P0DP01 117 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 HLA-DOBP13765 273 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 HERV-K104P61576 105 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 ETDBQ3ZM63 59 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 RNASEKQ6P5S7 137 aaKnown RBP5.76□□□□□ -1.49
ZNF540-202ENST00000343599 ACP7Q6ZNF0 438 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 SH2D6Q7Z4S9 175 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 BCL6BQ8N143 479 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-202ENST00000343599 LRRC29Q8WV35 223 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 C11orf52Q96A22 123 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms