RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 RNF126Q9BV68 326 aa9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 KLK5Q9Y337 293 aaPredicted RBP9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 ALMS1Q8TCU4 4167 aa9.73□□□□□ -0.85
SIRPB3P-201ENST00000340424 H3BMM0 161 aa9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 SOCS3O14543 225 aa9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 CCSO14618 274 aa9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 PET100P0DJ07 73 aa9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 ORM2P19652 201 aa9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 VAMP2P63027 116 aa9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 C10orf91Q5T1B1 145 aa9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 PXDC1Q5TGL8 231 aa9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 CEMP1Q6PRD7 247 aaPredicted RBP9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 TEPPQ6URK8 271 aa9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 ZNF471Q9BX82 626 aaPredicted RBP9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 CYTL1Q9NRR1 136 aa9.72□□□□□ -0.85
SIRPB3P-201ENST00000340424 C5orf51A6NDU8 294 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 ZNF705EA8MWA4 302 aaPredicted RBP9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 FAM25EA8MYX2 175 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 TAAR5O14804 337 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 HYPMO75409 117 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 DEDDO75618 318 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 H2AFB1P0C5Y9 115 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 PVALBP20472 110 aaPredicted RBP9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 EIF5AP63241 154 aaKnown RBP9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 EWSR1Q01844 656 aaKnown RBP eCLIP9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 PMS2P11Q13670 270 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 FAM122CQ6P4D5 195 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 C11orf45Q8TAV5 145 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 C2orf50Q96LR7 162 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 HRH4Q9H3N8 390 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 SAV1Q9H4B6 383 aaPredicted RBP9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 SLC25A22Q9H936 323 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 HIGD1AQ9Y241 93 aa9.71□□□□□ -0.86
SIRPB3P-201ENST00000340424 LINC00869P0C866 280 aa9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 RPL7P18124 248 aaKnown RBP9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 GATA2P23769 480 aaPredicted RBP9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 TMEM182Q6ZP80 229 aaPredicted RBP9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 BAP18Q8IXM2 172 aa9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 Q8NAQ8 132 aa9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 CSNK1G2-AS1Q8NCQ2 148 aa9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 SAT2Q96F10 170 aaPredicted RBP9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 C16orf92Q96LL3 132 aa9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 SHANK2-AS3Q9BTD1 123 aa9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 SLC25A39Q9BZJ4 359 aaPredicted RBP9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 RPRMQ9NS64 109 aa9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 CARHSP1Q9Y2V2 147 aaKnown RBP9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 AGRNO00468 2067 aa9.7□□□□□ -0.86
SIRPB3P-201ENST00000340424 HYDINQ4G0P3 5121 aa9.69□□□□□ -0.86
SIRPB3P-201ENST00000340424 H0YIZ8 118 aa9.69□□□□□ -0.86
SIRPB3P-201ENST00000340424 H3BRN7 92 aa9.69□□□□□ -0.86
SIRPB3P-201ENST00000340424 BTN1A1Q13410 526 aa9.69□□□□□ -0.86
SIRPB3P-201ENST00000340424 RAB31Q13636 194 aa9.69□□□□□ -0.86
SIRPB3P-201ENST00000340424 EBLN2Q6P2I7 272 aa9.69□□□□□ -0.86
SIRPB3P-201ENST00000340424 RNF141Q8WVD5 230 aa9.69□□□□□ -0.86
SIRPB3P-201ENST00000340424 RSG1Q9BU20 258 aa9.69□□□□□ -0.86
SIRPB3P-201ENST00000340424 TMEM218A2RU14 115 aa9.68□□□□□ -0.86
SIRPB3P-201ENST00000340424 CAV2P51636 162 aa9.68□□□□□ -0.86
SIRPB3P-201ENST00000340424 FAM74A1Q5RGS3 127 aa9.68□□□□□ -0.86
SIRPB3P-201ENST00000340424 EIF5AL1Q6IS14 154 aaKnown RBP9.68□□□□□ -0.86
SIRPB3P-201ENST00000340424 PHLDA1Q8WV24 401 aaPredicted RBP9.68□□□□□ -0.86
SIRPB3P-201ENST00000340424 SCRT1Q9BWW7 348 aa9.68□□□□□ -0.86
SIRPB3P-201ENST00000340424 LYRM2Q9NU23 88 aaPredicted RBP9.68□□□□□ -0.86
SIRPB3P-201ENST00000340424 LSM5Q9Y4Y9 91 aaKnown RBP9.68□□□□□ -0.86
SIRPB3P-201ENST00000340424 IGHV4-28A0A0C4DH34 117 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 C11orf94C9JXX5 98 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 AGPAT2O15120 278 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 OR5G3P0C626 314 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 HBG1P69891 147 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 HBG2P69892 147 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 SLC38A11Q08AI6 406 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 LRRC37A5PQ49AS3 106 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 STX12Q86Y82 276 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 CLRN3Q8NCR9 226 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 NEU1Q99519 415 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 C11orf1Q9H5F2 150 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 CLEC5AQ9NY25 188 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 DOK5Q9P104 306 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 X6R8D5 127 aa9.67□□□□□ -0.86
SIRPB3P-201ENST00000340424 A0A087X0K7 114 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 A0A0J9YX75 114 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 SMIM9A6NGZ8 99 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 SULT1A1P50225 295 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 TCTAP57738 103 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 S100A10P60903 97 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 ARL16Q0P5N6 197 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 GDF5OSQ5U4N7 250 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 SVBPQ8N300 66 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 LINC00476Q8WZB0 136 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 NKX6-2Q9C056 277 aaPredicted RBP9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 ARV1Q9H2C2 271 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 UQCC1Q9NVA1 299 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 XCL2Q9UBD3 114 aa9.66□□□□□ -0.86
SIRPB3P-201ENST00000340424 DUSP14O95147 198 aaKnown RBP9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 APOC3P02656 99 aa9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 RBMY1A1P0DJD3 496 aaKnown RBP9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 RBMY1CP0DJD4 496 aa9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 NANOS2P60321 138 aaKnown RBP9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 PSG9Q00887 426 aa9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 FLI1Q01543 452 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms