RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 SPRR3Q9UBC9 169 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 PKD1P98161 4303 aa4.46□□□□□ -1.7
CSDE1-202ENST00000339438 HEATR1Q9H583 2144 aaKnown RBP4.46□□□□□ -1.7
CSDE1-202ENST00000339438 TRGV8A0A0C4DH27 118 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 hADV38S2A0JD32 116 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 KRTAP1-1Q07627 177 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 CFAP126Q5VTH2 177 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 TRAT1Q6PIZ9 186 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 ZNF562Q6V9R5 426 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 ADTRPQ96IZ2 230 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 SLC25A33Q9BSK2 321 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 FAT2Q9NYQ8 4349 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 FAM208BQ5VWN6 2430 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 SPG11Q96JI7 2443 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 A0A1B0GWB2 263 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 ZNF716A6NP11 495 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 A8MWL6 223 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 H0Y8G0 127 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 CFHR2P36980 270 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 CT83Q5H943 113 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 C1orf229Q6ZS94 237 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-202ENST00000339438 MOB1BQ7L9L4 216 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 H2BFWTQ7Z2G1 175 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 MOB3BQ86TA1 216 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 SYT8Q8NBV8 401 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 ATP6V0E2Q8NHE4 81 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 NABP2Q9BQ15 211 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 HAX1O00165 279 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 OR2H2O95918 312 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 THBDP07204 575 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 CT45A6P0DMU7 189 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 CT45A5P0DMU8 189 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 CT45A7P0DMV0 189 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 TM4SF20Q53R12 229 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 CT45A1Q5HYN5 189 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 AMTNQ6UX39 209 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 CT45A3Q8NHU0 189 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 ITLN2Q8WWU7 325 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-202ENST00000339438 TCF19Q9Y242 345 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 MED13LQ71F56 2210 aa4.45□□□□□ -1.7
CSDE1-202ENST00000339438 B5MCH6 92 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 ACTL6BO94805 426 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 SRD5A1P18405 259 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 FOXF2Q12947 444 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 MKXQ8IYA7 352 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 BCL6BQ8N143 479 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-202ENST00000339438 RPRMLQ8N4K4 120 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 C1QTNF4Q9BXJ3 329 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 TTTY13Q9BZ97 58 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 GFRA4Q9GZZ7 299 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 CYSLTR1Q9Y271 337 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 PLCE1Q9P212 2302 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 STARD9Q9P2P6 4700 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 TRAV5A0A0B4J249 113 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 C5orf49A4QMS7 147 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 C12orf77C9JDV5 145 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 J3KRW8 73 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 RBMXL2O75526 392 aaKnown RBP4.44□□□□□ -1.7
CSDE1-202ENST00000339438 TAS2R45P59539 299 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 GLMPQ8WWB7 406 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 SOX21Q9Y651 276 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-202ENST00000339438 AGRNO00468 2067 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 HYDINQ4G0P3 5121 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 TRAV17A0A0B4J275 112 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 PSPNO60542 156 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 LYZL6O75951 148 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 MORN3Q6PF18 240 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-202ENST00000339438 CEND1Q8N111 149 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 ZNF808Q8N4W9 903 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-202ENST00000339438 C8orf46Q8TAG6 207 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 RAX2Q96IS3 184 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 U3KQK5 164 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 DNAH2Q9P225 4427 aa4.44□□□□□ -1.7
CSDE1-202ENST00000339438 VPS13DQ5THJ4 4388 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 FAM90A27PA6NNH2 459 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 MOGAT3Q86VF5 341 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 FAM90A1Q86YD7 464 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 VKORC1L1Q8N0U8 176 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 RPP21Q9H633 154 aaKnown RBP4.43□□□□□ -1.7
CSDE1-202ENST00000339438 POLDIP2Q9Y2S7 368 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 UFC1Q9Y3C8 167 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 AMMECR1Q9Y4X0 333 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-202ENST00000339438 RYR3Q15413 4870 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 PRRC2AP48634 2157 aaKnown RBP4.43□□□□□ -1.7
CSDE1-202ENST00000339438 B9A039 149 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 PEX7O00628 323 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 CT45A10P0DMU9 189 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 FKBP2P26885 142 aaKnown RBP4.43□□□□□ -1.7
CSDE1-202ENST00000339438 TCTAP57738 103 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 LY6DQ14210 128 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 NANOS1Q8WY41 292 aaKnown RBP4.43□□□□□ -1.7
CSDE1-202ENST00000339438 FXYD5Q96DB9 178 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 AJUBAQ96IF1 538 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 DOPEY1Q5JWR5 2465 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 TRBV25-1A0A075B6N4 114 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 LINC01546A6NGU7 62 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 NPIPB5A8MRT5 1133 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 CCDC179H3BU77 68 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 C19orf84I3L1E1 186 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 J3QR89 54 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms