RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 BORCS7-ASMTA0A0B4J1R7 106 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 H3BQ15 152 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 SLC17A3O00476 420 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 TAAR5O14804 337 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 HLA-DRB4P13762 266 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 DEFB1P60022 68 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 GDF5OSQ5U4N7 250 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 FOXI2Q6ZQN5 318 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 SLC50A1Q9BRV3 221 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 SH3BGRL3Q9H299 93 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 RPRMQ9NS64 109 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 HLA-DRB4X5D2U9 266 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 DNAH7Q8WXX0 4024 aa9.45□□□□□ -0.9
SRSF3-201ENST00000339436 H3BTX0 84 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 UBE2CO00762 179 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
SRSF3-201ENST00000339436 PYYP10082 97 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 M6PRP20645 277 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 RAB2AP61019 212 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 RHOBP62745 196 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 GUK1Q16774 197 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 ACOT6Q3I5F7 207 aaPredicted RBP9.44□□□□□ -0.9
SRSF3-201ENST00000339436 IGFL4Q6B9Z1 124 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 Q6ZWC4 215 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 KCNRGQ8N5I3 272 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 CSTL1Q9H114 145 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 SAV1Q9H4B6 383 aaPredicted RBP9.44□□□□□ -0.9
SRSF3-201ENST00000339436 ZNF331Q9NQX6 463 aaPredicted RBP9.44□□□□□ -0.9
SRSF3-201ENST00000339436 ZNF586Q9NXT0 402 aa9.44□□□□□ -0.9
SRSF3-201ENST00000339436 H3BMM0 161 aa9.43□□□□□ -0.9
SRSF3-201ENST00000339436 ZNF253O75346 499 aa9.43□□□□□ -0.9
SRSF3-201ENST00000339436 JTBO76095 146 aa9.43□□□□□ -0.9
SRSF3-201ENST00000339436 SPP1P10451 314 aa9.43□□□□□ -0.9
SRSF3-201ENST00000339436 DEFB135Q30KP9 77 aa9.43□□□□□ -0.9
SRSF3-201ENST00000339436 AKAP14Q86UN6 197 aa9.43□□□□□ -0.9
SRSF3-201ENST00000339436 LRRC20Q8TCA0 184 aa9.43□□□□□ -0.9
SRSF3-201ENST00000339436 GNPNAT1Q96EK6 184 aaPredicted RBP9.43□□□□□ -0.9
SRSF3-201ENST00000339436 SAT2Q96F10 170 aaPredicted RBP9.43□□□□□ -0.9
SRSF3-201ENST00000339436 CYTL1Q9NRR1 136 aa9.43□□□□□ -0.9
SRSF3-201ENST00000339436 F6UB75 175 aa9.42□□□□□ -0.9
SRSF3-201ENST00000339436 CA1P00915 261 aaPredicted RBP9.42□□□□□ -0.9
SRSF3-201ENST00000339436 HIST1H1EP10412 219 aaKnown RBP9.42□□□□□ -0.9
SRSF3-201ENST00000339436 C4BPBP20851 252 aa9.42□□□□□ -0.9
SRSF3-201ENST00000339436 HLA-DMBP28068 263 aa9.42□□□□□ -0.9
SRSF3-201ENST00000339436 SERF2P84101 59 aa9.42□□□□□ -0.9
SRSF3-201ENST00000339436 PDE6HQ13956 83 aa9.42□□□□□ -0.9
SRSF3-201ENST00000339436 KHDC3LQ587J8 217 aa9.42□□□□□ -0.9
SRSF3-201ENST00000339436 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
SRSF3-201ENST00000339436 ZNF738Q8NE65 137 aa9.42□□□□□ -0.9
SRSF3-201ENST00000339436 ARPC5LQ9BPX5 153 aa9.42□□□□□ -0.9
SRSF3-201ENST00000339436 TRBV19A0A075B6N1 114 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 A0A0D9SG52 128 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 A0A0J9YX75 114 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 A0A1B0GVG6 124 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 OR7C2O60412 319 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 GIG44P09565 113 aaPredicted RBP9.41□□□□□ -0.9
SRSF3-201ENST00000339436 TAS2R45P59539 299 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 EBLN2Q6P2I7 272 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 CLUHP3Q96NS8 147 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 PAXXQ9BUH6 204 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 OR51M1Q9H341 326 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 BCL2L11O43521 198 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 NDUFB4O95168 129 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 MBP02144 154 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 C1QBP02746 253 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 OR10J4P0C629 311 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 UBE2L3P68036 154 aaKnown RBP9.41□□□□□ -0.9
SRSF3-201ENST00000339436 PSG3Q16557 428 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 FAM122CQ6P4D5 195 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 OR10G4Q8NGN3 311 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 OR10G9Q8NGN4 311 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 OR10G7Q8NGN6 311 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 OVOL2Q9BRP0 275 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 CLEC5AQ9NY25 188 aa9.41□□□□□ -0.9
SRSF3-201ENST00000339436 A0A1W2PPV4 95 aa9.4□□□□□ -0.91
SRSF3-201ENST00000339436 KANTRA0A1W2PQU2 76 aa9.4□□□□□ -0.91
SRSF3-201ENST00000339436 A8MTW9 85 aa9.4□□□□□ -0.91
SRSF3-201ENST00000339436 EIF3GO75821 320 aaKnown RBP eCLIP9.4□□□□□ -0.915e-19■■□□□ 12.6
SRSF3-201ENST00000339436 CDC34P49427 236 aaPredicted RBP9.4□□□□□ -0.91
SRSF3-201ENST00000339436 TMEM41BQ5BJD5 291 aa9.4□□□□□ -0.91
SRSF3-201ENST00000339436 RPP25LQ8N5L8 163 aaKnown RBP9.4□□□□□ -0.91
SRSF3-201ENST00000339436 BLNKQ8WV28 456 aa9.4□□□□□ -0.91
SRSF3-201ENST00000339436 RPUSD4Q96CM3 377 aaKnown RBP9.4□□□□□ -0.91
SRSF3-201ENST00000339436 RNF183Q96D59 192 aa9.4□□□□□ -0.91
SRSF3-201ENST00000339436 SPRY2O43597 315 aa9.39□□□□□ -0.91
SRSF3-201ENST00000339436 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
SRSF3-201ENST00000339436 NBEAP1P0C6P0 100 aa9.39□□□□□ -0.91
SRSF3-201ENST00000339436 CNN1P51911 297 aaKnown RBP9.39□□□□□ -0.91
SRSF3-201ENST00000339436 NUTF2P61970 127 aaKnown RBP9.39□□□□□ -0.91
SRSF3-201ENST00000339436 CD300CQ08708 224 aa9.39□□□□□ -0.91
SRSF3-201ENST00000339436 PQLC2Q6ZP29 291 aa9.39□□□□□ -0.91
SRSF3-201ENST00000339436 OR4B1Q8NGF8 309 aa9.39□□□□□ -0.91
SRSF3-201ENST00000339436 OR8A1Q8NGG7 326 aa9.39□□□□□ -0.91
SRSF3-201ENST00000339436 RNF141Q8WVD5 230 aa9.39□□□□□ -0.91
SRSF3-201ENST00000339436 PHYHIPLQ96FC7 376 aa9.39□□□□□ -0.91
SRSF3-201ENST00000339436 PFDN1O60925 122 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms