RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TRPT1Q86TN4 253 aaKnown RBP10.03□□□□□ -0.8
FN1-202ENST00000336916 NPIPB5A8MRT5 1133 aa10.02□□□□□ -0.8
FN1-202ENST00000336916 TREML4Q6UXN2 200 aa10.02□□□□□ -0.8
FN1-202ENST00000336916 ERG28Q9UKR5 140 aa10.02□□□□□ -0.8
FN1-202ENST00000336916 HSD52Q0P140 79 aa10.02□□□□□ -0.81
FN1-202ENST00000336916 C6orf226Q5I0X4 101 aa10.02□□□□□ -0.81
FN1-202ENST00000336916 BPESC1Q9GZL8 116 aa10.02□□□□□ -0.81
FN1-202ENST00000336916 LINC01619G3V211 115 aa10.02□□□□□ -0.81
FN1-202ENST00000336916 RNF126Q9BV68 326 aa10.02□□□□□ -0.81
FN1-202ENST00000336916 CLDN16Q9Y5I7 305 aa10.02□□□□□ -0.81
FN1-202ENST00000336916 TBX6O95947 436 aaPredicted RBP10.02□□□□□ -0.81
FN1-202ENST00000336916 LHFPL1Q86WI0 220 aa10.02□□□□□ -0.81
FN1-202ENST00000336916 ZNF474Q6S9Z5 364 aaPredicted RBP10.01□□□□□ -0.81
FN1-202ENST00000336916 PINLYPA6NC86 204 aa10.01□□□□□ -0.81
FN1-202ENST00000336916 IGF2-ASQ6U949 168 aa10.01□□□□□ -0.81
FN1-202ENST00000336916 ATOH7Q8N100 152 aa10.01□□□□□ -0.81
FN1-202ENST00000336916 GAFA1Q96PS6 74 aa10.01□□□□□ -0.81
FN1-202ENST00000336916 SP5Q6BEB4 398 aaPredicted RBP10.01□□□□□ -0.81
FN1-202ENST00000336916 IGHV2-70DA0A0C4DH43 119 aa10.01□□□□□ -0.81
FN1-202ENST00000336916 RNF152Q8N8N0 203 aa10.01□□□□□ -0.81
FN1-202ENST00000336916 FAM231BA6NCW3 169 aa10.01□□□□□ -0.81
FN1-202ENST00000336916 CTAG1AP78358 180 aa10.01□□□□□ -0.81
FN1-202ENST00000336916 C1QL4Q86Z23 238 aa10□□□□□ -0.81
FN1-202ENST00000336916 IGHV1-69DA0A0B4J2H0 117 aa10□□□□□ -0.81
FN1-202ENST00000336916 IGHV1-69P01742 117 aa10□□□□□ -0.81
FN1-202ENST00000336916 C1orf122Q6ZSJ8 110 aa10□□□□□ -0.81
FN1-202ENST00000336916 DERL1Q9BUN8 251 aa10□□□□□ -0.81
FN1-202ENST00000336916 H3BMM0 161 aa10□□□□□ -0.81
FN1-202ENST00000336916 PAX4O43316 350 aa10□□□□□ -0.81
FN1-202ENST00000336916 TMEM14EPQ6UXP3 125 aa10□□□□□ -0.81
FN1-202ENST00000336916 SH2D6Q7Z4S9 175 aa10□□□□□ -0.81
FN1-202ENST00000336916 MLNRO43193 412 aa10□□□□□ -0.81
FN1-202ENST00000336916 NMSQ5H8A3 153 aa10□□□□□ -0.81
FN1-202ENST00000336916 ZNF362Q5T0B9 420 aaPredicted RBP10□□□□□ -0.81
FN1-202ENST00000336916 TMEM14BQ9NUH8 114 aa10□□□□□ -0.81
FN1-202ENST00000336916 NBL1P41271 181 aa10□□□□□ -0.81
FN1-202ENST00000336916 NEGR1Q7Z3B1 354 aa10□□□□□ -0.81
FN1-202ENST00000336916 TRAV8-2A0A0B4J237 113 aa10□□□□□ -0.81
FN1-202ENST00000336916 YPEL3P61236 119 aaPredicted RBP10□□□□□ -0.81
FN1-202ENST00000336916 TRBV25-1A0A075B6N4 114 aa10□□□□□ -0.81
FN1-202ENST00000336916 CFPP27918 469 aa10□□□□□ -0.81
FN1-202ENST00000336916 CD55P08174 381 aa9.99□□□□□ -0.81
FN1-202ENST00000336916 MDKP21741 143 aaPredicted RBP9.99□□□□□ -0.81
FN1-202ENST00000336916 DAD1P61803 113 aa9.99□□□□□ -0.81
FN1-202ENST00000336916 Q6P435 159 aa9.99□□□□□ -0.81
FN1-202ENST00000336916 PNRC2Q9NPJ4 139 aaKnown RBP9.99□□□□□ -0.81
FN1-202ENST00000336916 FOXL2NBQ6ZUU3 175 aa9.99□□□□□ -0.81
FN1-202ENST00000336916 KLF2Q9Y5W3 355 aaPredicted RBP9.99□□□□□ -0.81
FN1-202ENST00000336916 RPL15P61313 204 aaKnown RBP9.99□□□□□ -0.81
FN1-202ENST00000336916 ZNF561-AS1K7EIQ3 104 aa9.99□□□□□ -0.81
FN1-202ENST00000336916 NHP2Q9NX24 153 aaKnown RBP9.99□□□□□ -0.81
FN1-202ENST00000336916 CD24P25063 80 aa9.99□□□□□ -0.81
FN1-202ENST00000336916 GNG5P63218 68 aa9.99□□□□□ -0.81
FN1-202ENST00000336916 E7EQL1 145 aa9.99□□□□□ -0.81
FN1-202ENST00000336916 LYPD3O95274 346 aa9.99□□□□□ -0.81
FN1-202ENST00000336916 RPL35AP18077 110 aaKnown RBP9.99□□□□□ -0.81
FN1-202ENST00000336916 TSSC4Q9Y5U2 329 aaPredicted RBP9.99□□□□□ -0.81
FN1-202ENST00000336916 C21orf62-AS1Q17RA5 79 aa9.99□□□□□ -0.81
FN1-202ENST00000336916 TRBV24-1A0A075B6N3 115 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 FCN3O75636 299 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 LMO1P25800 156 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 ATP6V0BQ99437 205 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 MRPL27Q9P0M9 148 aaKnown RBP9.98□□□□□ -0.81
FN1-202ENST00000336916 LOC102724200A0A096LPH7 203 aaPredicted RBP9.98□□□□□ -0.81
FN1-202ENST00000336916 TRAV12-3A0A0B4J271 114 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 LINC00311Q8N616 119 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 K7EMI3 77 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 C1QTNF9P0C862 333 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 TMEM141Q96I45 108 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 COL4A6Q14031 1691 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 NDUFA4O00483 81 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 PYYP10082 97 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 ZNF876PQ49A33 203 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 LY6G5BQ8NDX9 201 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 FAM110DQ8TAY7 271 aaPredicted RBP9.98□□□□□ -0.81
FN1-202ENST00000336916 FGF16O43320 207 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 BOD1L2Q8IYS8 172 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 CD177Q8N6Q3 437 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 C14orf144Q96I85 54 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 RHPN1-AS1Q9BWJ2 59 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 TRAV2A0A0B4J234 112 aa9.98□□□□□ -0.81
FN1-202ENST00000336916 GATA2P23769 480 aaPredicted RBP9.98□□□□□ -0.81
FN1-202ENST00000336916 RNF222A6NCQ9 220 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 LYNX1G3V0Z9 82 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 SERF1AO75920 110 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 LYNX1P0DP58 116 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 SCRT1Q9BWW7 348 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 LIME1Q9H400 295 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 IGHV3OR16-8A0A075B7F1 116 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 MRPL52Q86TS9 123 aaKnown RBP9.97□□□□□ -0.81
FN1-202ENST00000336916 ZCCHC24Q8N2G6 241 aaKnown RBP9.97□□□□□ -0.81
FN1-202ENST00000336916 TMEM256Q8N2U0 113 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 IGKV3D-20A0A0C4DH25 116 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 B3GALT5-AS1P59052 145 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 PAQR4Q8N4S7 273 aaPredicted RBP9.97□□□□□ -0.81
FN1-202ENST00000336916 OCC1Q8TAD7 63 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 A0A0A6YYD4 124 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 LDLRAD4O15165 306 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 EVI2AP22794 236 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 Q0VFX4 171 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms