RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 IGHV2-70DA0A0C4DH43 119 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 NDUFA3O95167 84 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 EFNA4P52798 201 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 CLEC19AQ6UXS0 136 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 DAZAP1Q96EP5 407 aaKnown RBP6.92□□□□□ -1.3
SNCA-201ENST00000336904 AJUBAQ96IF1 538 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 GNB1LQ9BYB4 327 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 IGKV3-7A0A075B6H7 116 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 A0A1W2PS18 150 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 ZNF785A8K8V0 405 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 IGLV2-11P01706 119 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 APOHP02749 345 aaPredicted RBP6.92□□□□□ -1.3
SNCA-201ENST00000336904 PKIAP61925 76 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 ZNF562Q6V9R5 426 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 BPIFA4PQ86YQ2 179 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 OR4F17Q8NGA8 305 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 SHANK2-AS3Q9BTD1 123 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 NBPF19A0A087WUL8 3843 aa6.92□□□□□ -1.3
SNCA-201ENST00000336904 TEX15Q9BXT5 2789 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 TRBV19A0A075B6N1 114 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 CLEC3BP05452 202 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 HIST1H1EP10412 219 aaKnown RBP6.91□□□□□ -1.3
SNCA-201ENST00000336904 PVRIGQ6DKI7 326 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 SIGLECL1Q8N7X8 197 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 NPBQ8NG41 125 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 RPP21Q9H633 154 aaKnown RBP6.91□□□□□ -1.3
SNCA-201ENST00000336904 CLEC5AQ9NY25 188 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 H3BRN7 92 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 J3KRW8 73 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 EREGO14944 169 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 IGHV4-38-2P0DP08 117 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 MFAP4P55083 255 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 FXYD7P58549 80 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 TPPP2P59282 170 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 DEFB1P60022 68 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 RHOGP84095 191 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 PAX2Q02962 417 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 SIGLEC15Q6ZMC9 328 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 GRAMD2BQ96HH9 432 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 CREBBPQ92793 2442 aa6.91□□□□□ -1.3
SNCA-201ENST00000336904 NAV2Q8IVL1 2488 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 CENPVL3A0A0U1RRI6 287 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 LTAP01374 205 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 CTSGP08311 255 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 ERCC8Q13216 396 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 BATFQ16520 125 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 STXBP6Q8NFX7 210 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 C18orf32Q8TCD1 76 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 ZNF414Q96IQ9 312 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 MLST8Q9BVC4 326 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 NRN1Q9NPD7 142 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 ZNF469Q96JG9 3925 aaPredicted RBP6.9□□□□□ -1.3
SNCA-201ENST00000336904 TOMM40O96008 361 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 IGHV3-11P01762 117 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 ARMS2P0C7Q2 107 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 IGLC2P0DOY2 106 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 Q6ZQT7 251 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 Q6ZS46 218 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 LINC00173Q6ZV60 143 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 TSKUQ8WUA8 353 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 C1RLQ9NZP8 487 aa6.9□□□□□ -1.3
SNCA-201ENST00000336904 MYO9AB2RTY4 2548 aa6.9□□□□□ -1.31
SNCA-201ENST00000336904 SORL1Q92673 2214 aa6.9□□□□□ -1.31
SNCA-201ENST00000336904 IGHV4-30-2A0A087WSY4 118 aa6.9□□□□□ -1.31
SNCA-201ENST00000336904 A8MWP6 167 aa6.9□□□□□ -1.31
SNCA-201ENST00000336904 PPIFP30405 207 aaKnown RBP6.9□□□□□ -1.31
SNCA-201ENST00000336904 CRIP1P50238 77 aa6.9□□□□□ -1.31
SNCA-201ENST00000336904 ZNF705AQ6ZN79 300 aaPredicted RBP6.9□□□□□ -1.31
SNCA-201ENST00000336904 VGLL1Q99990 258 aa6.9□□□□□ -1.31
SNCA-201ENST00000336904 NPFFO15130 113 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 HLA-DQA1P01909 254 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 FAM106CPP0CH98 169 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 BRS3P32247 399 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 ATP5J2P56134 94 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 TCTAP57738 103 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 CCDC144NLQ6NUI1 221 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 Q8N6K4 173 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 FMC1Q96HJ9 113 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 CCL19Q99731 98 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 OTORQ9NRC9 128 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 PSG8Q9UQ74 426 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 PRAC2D3DTV9 90 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 SPRY2O43597 315 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 TRBV12-3P01733 135 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 GPX1P07203 203 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 PLP1P60201 277 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 TMEM95Q3KNT9 176 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 HIST2H2BDQ6DRA6 164 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 WDR73Q6P4I2 378 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 PMCHL2Q9BQD1 86 aa6.89□□□□□ -1.31
SNCA-201ENST00000336904 NPIPB5A8MRT5 1133 aa6.88□□□□□ -1.31
SNCA-201ENST00000336904 KCNS1Q96KK3 526 aa6.88□□□□□ -1.31
SNCA-201ENST00000336904 KLF12Q9Y4X4 402 aa6.88□□□□□ -1.31
SNCA-201ENST00000336904 SMAD5-AS1Q9Y6J3 95 aa6.88□□□□□ -1.31
SNCA-201ENST00000336904 NF1P21359 2839 aa6.88□□□□□ -1.31
SNCA-201ENST00000336904 DIRC3C9JPN6 131 aa6.88□□□□□ -1.31
SNCA-201ENST00000336904 MRPS12O15235 138 aaKnown RBP6.88□□□□□ -1.31
SNCA-201ENST00000336904 HSBP1O75506 76 aa6.88□□□□□ -1.31
SNCA-201ENST00000336904 RNF5Q99942 180 aa6.88□□□□□ -1.31
SNCA-201ENST00000336904 SERTM2A0A1B0GWG4 89 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms