RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 C2orf83Q53S99 150 aa11.08□□□□□ -0.64
SF1-202ENST00000334944 TNFRSF13BO14836 293 aaPredicted RBP11.08□□□□□ -0.64
SF1-202ENST00000334944 IGLV2-23P01705 113 aa11.08□□□□□ -0.64
SF1-202ENST00000334944 GNG5P63218 68 aa11.08□□□□□ -0.64
SF1-202ENST00000334944 IGF2BP2-AS1Q96M15 143 aa11.08□□□□□ -0.64
SF1-202ENST00000334944 HLA-DRB1P01911 266 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 TMEM155Q4W5P6 130 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 PGLYRP4Q96LB8 373 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 TMUB1Q9BVT8 246 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 NGBQ9NPG2 151 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 A0A1W2PPI3 338 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 H3BTX0 84 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 CCL21O00585 134 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 COX8AP10176 69 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 DLX6P56179 175 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 TMEM177Q53S58 311 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
SF1-202ENST00000334944 CCDC144NLQ6NUI1 221 aa11.07□□□□□ -0.64
SF1-202ENST00000334944 CELSR1Q9NYQ6 3014 aa11.06□□□□□ -0.64
SF1-202ENST00000334944 DLL1O00548 723 aa11.06□□□□□ -0.64
SF1-202ENST00000334944 VSTM2AQ8TAG5 236 aa11.06□□□□□ -0.64
SF1-202ENST00000334944 K7ERJ3 54 aa11.06□□□□□ -0.64
SF1-202ENST00000334944 ORM2P19652 201 aa11.06□□□□□ -0.64
SF1-202ENST00000334944 SEC11AP67812 179 aa11.06□□□□□ -0.64
SF1-202ENST00000334944 ATP5G2Q06055 141 aa11.06□□□□□ -0.64
SF1-202ENST00000334944 BLNKQ8WV28 456 aa11.06□□□□□ -0.64
SF1-202ENST00000334944 C19orf24Q9BVV8 132 aa11.06□□□□□ -0.64
SF1-202ENST00000334944 TMEM133Q9H2Q1 129 aa11.06□□□□□ -0.64
SF1-202ENST00000334944 GAGE12HA6NDE8 117 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 H3BRM9 83 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 UBE2L3P68036 154 aaKnown RBP11.05□□□□□ -0.64
SF1-202ENST00000334944 SH2D6Q7Z4S9 175 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 OR8A1Q8NGG7 326 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 VKORC1Q9BQB6 163 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 A0A1W2PPM0 123 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 FCGR2BP31994 310 aaPredicted RBP11.05□□□□□ -0.64
SF1-202ENST00000334944 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 TMEM167AQ8TBQ9 72 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 SLC25A33Q9BSK2 321 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 A6NDN8 102 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 PDPNQ86YL7 162 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 COL25A1Q9BXS0 654 aaPredicted RBP11.05□□□□□ -0.64
SF1-202ENST00000334944 SMPXQ9UHP9 88 aa11.05□□□□□ -0.64
SF1-202ENST00000334944 COX7A2P2O60397 106 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 WFDC2Q14508 124 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 PSG3Q16557 428 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 MRGPRG-AS1Q2M3A8 158 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 PATE2Q6UY27 113 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 C18orf15Q96N68 181 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 ONECUT1Q9UBC0 465 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 SSUH2Q9Y2M2 353 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 SLC25A2Q9BXI2 301 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 TTTY13Q9BZ97 58 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 FBXL15Q9H469 300 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 SPG11Q96JI7 2443 aa11.04□□□□□ -0.64
SF1-202ENST00000334944 K7EQM0 130 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 OR2J3O76001 311 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 TMEM30BQ3MIR4 351 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 VMA21Q3ZAQ7 101 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 LINC00322Q6ZN03 302 aaPredicted RBP11.03□□□□□ -0.64
SF1-202ENST00000334944 TMEM167BQ9NRX6 74 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 AMMECR1Q9Y4X0 333 aaPredicted RBP11.03□□□□□ -0.64
SF1-202ENST00000334944 INSIG2Q9Y5U4 225 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 ITPR1Q14643 2758 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 IGKV1D-37A0A075B6S9 117 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 B9A039 149 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 FAM106CPP0CH98 169 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 C8orf88P0DMB2 117 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 NMUP48645 174 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 FAM106AQ4KMX7 169 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 PCP2Q8IVA1 136 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 WIPF2Q8TF74 440 aaPredicted RBP11.03□□□□□ -0.64
SF1-202ENST00000334944 GRAMD2BQ96HH9 432 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 FAM167A-AS1Q96KT0 104 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 C1RLQ9NZP8 487 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 FABP2P12104 132 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 INSL3P51460 131 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 S4R3C0 116 aa11.03□□□□□ -0.64
SF1-202ENST00000334944 CHEK1O14757 476 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 FGF6P10767 208 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 GATA3P23771 443 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 MC5RP33032 325 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 ZNF672Q499Z4 452 aaPredicted RBP11.02□□□□□ -0.65
SF1-202ENST00000334944 WFDC3Q8IUB2 231 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 LIPFP07098 398 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 HBBP68871 147 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 SAMD5Q5TGI4 173 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 C10orf113Q5VZT2 155 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 PET117Q6UWS5 81 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 Q71RC1 249 aaPredicted RBP11.02□□□□□ -0.65
SF1-202ENST00000334944 ASCL2Q99929 193 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 MS4A6AQ9H2W1 248 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 KAAG1Q9UBP8 84 aa11.02□□□□□ -0.65
SF1-202ENST00000334944 ZFHX3Q15911 3703 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 PSMB11A5LHX3 300 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 OR5AL1P0C617 328 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 GCSHP23434 173 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 TAS2R45P59539 299 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 KLRD1Q13241 179 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 ETDBQ3ZM63 59 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms