RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 HIST1H1EP10412 219 aaKnown RBP11.32□□□□□ -0.6
CMC1-201ENST00000334841 GCHFRP30047 84 aa11.32□□□□□ -0.6
CMC1-201ENST00000334841 KRTAP10-11P60412 298 aa11.32□□□□□ -0.6
CMC1-201ENST00000334841 WFDC3Q8IUB2 231 aa11.32□□□□□ -0.6
CMC1-201ENST00000334841 MBD3L1Q8WWY6 194 aa11.32□□□□□ -0.6
CMC1-201ENST00000334841 TRBV19A0A075B6N1 114 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 TRAV2A0A0B4J234 112 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 A0A1B0GV50 99 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 OR4C46A6NHA9 309 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 DNASE2O00115 360 aaPredicted RBP11.31□□□□□ -0.6
CMC1-201ENST00000334841 H2AFB1P0C5Y9 115 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 MEOX2P50222 304 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 PAFAH1B2P68402 229 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 IFITM2Q01629 132 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 BEAN1Q3B7T3 259 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 SFT2D1Q8WV19 159 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 BLNKQ8WV28 456 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 SAT2Q96F10 170 aaPredicted RBP11.31□□□□□ -0.6
CMC1-201ENST00000334841 TMPRSS5Q9H3S3 457 aa11.31□□□□□ -0.6
CMC1-201ENST00000334841 TRAV8-2A0A0B4J237 113 aa11.3□□□□□ -0.6
CMC1-201ENST00000334841 NDUFB4O95168 129 aa11.3□□□□□ -0.6
CMC1-201ENST00000334841 IFNA7P01567 189 aa11.3□□□□□ -0.6
CMC1-201ENST00000334841 NBEAP1P0C6P0 100 aa11.3□□□□□ -0.6
CMC1-201ENST00000334841 GUK1Q16774 197 aa11.3□□□□□ -0.6
CMC1-201ENST00000334841 IQCF2Q8IXL9 164 aa11.3□□□□□ -0.6
CMC1-201ENST00000334841 SUN5Q8TC36 379 aa11.3□□□□□ -0.6
CMC1-201ENST00000334841 UBQLN2Q9UHD9 624 aa11.3□□□□□ -0.6
CMC1-201ENST00000334841 ZNF253O75346 499 aa11.29□□□□□ -0.6
CMC1-201ENST00000334841 PDE6HQ13956 83 aa11.29□□□□□ -0.6
CMC1-201ENST00000334841 ODF3L2Q3SX64 289 aa11.29□□□□□ -0.6
CMC1-201ENST00000334841 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
CMC1-201ENST00000334841 C16orf92Q96LL3 132 aa11.29□□□□□ -0.6
CMC1-201ENST00000334841 SLC50A1Q9BRV3 221 aa11.29□□□□□ -0.6
CMC1-201ENST00000334841 ZNF331Q9NQX6 463 aaPredicted RBP11.29□□□□□ -0.6
CMC1-201ENST00000334841 TRAV1-1A0A0B4J248 108 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 ISLRO14498 428 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 CD7P09564 240 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 ZNF688P0C7X2 276 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 HLA-DMBP28068 263 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 PSMB3P49720 205 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 KPRPQ5T749 579 aaPredicted RBP11.28□□□□□ -0.6
CMC1-201ENST00000334841 SAMD13Q5VXD3 122 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 RNF182Q8N6D2 247 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 PCNPQ8WW12 178 aaKnown RBP11.28□□□□□ -0.6
CMC1-201ENST00000334841 C20orf173Q96LM9 149 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 PRR25Q96S07 402 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 MAP6D1Q9H9H5 199 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 TMEM167BQ9NRX6 74 aa11.28□□□□□ -0.6
CMC1-201ENST00000334841 BLOC1S1P78537 153 aa11.27□□□□□ -0.61
CMC1-201ENST00000334841 CCL20P78556 96 aa11.27□□□□□ -0.61
CMC1-201ENST00000334841 LRRC20Q8TCA0 184 aa11.27□□□□□ -0.61
CMC1-201ENST00000334841 HBE1P02100 147 aa11.26□□□□□ -0.61
CMC1-201ENST00000334841 NMBP08949 121 aa11.26□□□□□ -0.61
CMC1-201ENST00000334841 CD81P60033 236 aa11.26□□□□□ -0.61
CMC1-201ENST00000334841 RANP62826 216 aaKnown RBP11.26□□□□□ -0.61
CMC1-201ENST00000334841 PSMG4Q5JS54 123 aa11.26□□□□□ -0.61
CMC1-201ENST00000334841 EXOC3-AS1Q8N2X6 119 aa11.26□□□□□ -0.61
CMC1-201ENST00000334841 LYPD6BQ8NI32 183 aa11.26□□□□□ -0.61
CMC1-201ENST00000334841 WFDC10AQ9H1F0 79 aa11.26□□□□□ -0.61
CMC1-201ENST00000334841 Q9H3A6 140 aa11.26□□□□□ -0.61
CMC1-201ENST00000334841 C19orf73Q9NVV2 129 aa11.26□□□□□ -0.61
CMC1-201ENST00000334841 YTHDF2Q9Y5A9 579 aaKnown RBP11.26□□□□□ -0.61
CMC1-201ENST00000334841 PRB4P10163 310 aaPredicted RBP11.25□□□□□ -0.61
CMC1-201ENST00000334841 ID1P41134 155 aa11.25□□□□□ -0.61
CMC1-201ENST00000334841 DEFB131AP59861 70 aa11.25□□□□□ -0.61
CMC1-201ENST00000334841 UBE2G2P60604 165 aa11.25□□□□□ -0.61
CMC1-201ENST00000334841 SNRPD3P62318 126 aaKnown RBP11.25□□□□□ -0.61
CMC1-201ENST00000334841 PSG9Q00887 426 aa11.25□□□□□ -0.61
CMC1-201ENST00000334841 ZNF767PQ75MW2 155 aa11.25□□□□□ -0.61
CMC1-201ENST00000334841 GTSCR1Q86UQ5 136 aa11.25□□□□□ -0.61
CMC1-201ENST00000334841 LINC00052Q96N35 136 aa11.25□□□□□ -0.61
CMC1-201ENST00000334841 ZMAT5Q9UDW3 170 aaKnown RBP11.25□□□□□ -0.61
CMC1-201ENST00000334841 FAM74A7A6NL05 159 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 OR11H12B2RN74 326 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 GGTLC3B5MD39 225 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 TEX46H3BTG2 121 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 M0R3E3 92 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 DEFB1P60022 68 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 ICAM4Q14773 271 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 ZNF124Q15973 351 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 PSG3Q16557 428 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 Q8N1Y9 231 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 LYPD1Q8N2G4 141 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
CMC1-201ENST00000334841 NOTCH3Q9UM47 2321 aa11.23□□□□□ -0.61
CMC1-201ENST00000334841 ZNF705FA8MVS1 300 aaPredicted RBP11.23□□□□□ -0.61
CMC1-201ENST00000334841 ZNF738Q8NE65 137 aa11.23□□□□□ -0.61
CMC1-201ENST00000334841 AAMDCQ9H7C9 122 aa11.23□□□□□ -0.61
CMC1-201ENST00000334841 OTORQ9NRC9 128 aa11.23□□□□□ -0.61
CMC1-201ENST00000334841 GNG13Q9P2W3 67 aa11.23□□□□□ -0.61
CMC1-201ENST00000334841 DNAH3Q8TD57 4116 aa11.23□□□□□ -0.61
CMC1-201ENST00000334841 MGAM2Q2M2H8 2515 aa11.23□□□□□ -0.61
CMC1-201ENST00000334841 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
CMC1-201ENST00000334841 PAGE4O60829 102 aa11.22□□□□□ -0.61
CMC1-201ENST00000334841 PRB2P02812 416 aaPredicted RBP11.22□□□□□ -0.61
CMC1-201ENST00000334841 GDF5OSQ5U4N7 250 aa11.22□□□□□ -0.61
CMC1-201ENST00000334841 MRPL53Q96EL3 112 aaKnown RBP11.22□□□□□ -0.61
CMC1-201ENST00000334841 CITED4Q96RK1 184 aa11.22□□□□□ -0.61
CMC1-201ENST00000334841 MANBALQ9NQG1 85 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms