RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 TMEM91Q6ZNR0 172 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 KCNRGQ8N5I3 272 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RNASE8Q8TDE3 154 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 CASTOR1Q8WTX7 329 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 ZCCHC13Q8WW36 166 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 BORCS8Q96FH0 119 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 NARS2Q96I59 477 aaKnown RBP0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RNF2Q99496 336 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 GINS3Q9BRX5 216 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 BANF2Q9H503 90 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 RERGLQ9H628 205 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 HRASLSQ9HDD0 168 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM14CQ9P0S9 112 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 DNAJB11Q9UBS4 358 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 PRNDQ9UKY0 176 aa0.94□□□□□ -2.26
LINC00643-201ENST00000334389 TRAV27A0A087WT01 109 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 IGKV1-12A0A0C4DH73 117 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 A0A1W2PPL8 197 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 METTL21EPA6NDL7 271 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 B4DEV8 164 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 RER1O15258 196 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 HRASP01112 189 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 IGKV1D-12P01611 117 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 IGHV3-53P01767 116 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 CD3GP09693 182 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ADCYAP1P18509 176 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OMGP23515 440 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 HLA-DMBP28068 263 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 CDAP32320 146 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 RAB5CP51148 216 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 CEBPGP53567 150 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TPPP2P59282 170 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 NANOS3P60323 173 aaKnown RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 RPS25P62851 125 aaKnown RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PPP3R1P63098 170 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 BLOC1S1P78537 153 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 CD164Q04900 197 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PIGFQ07326 219 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 SMCO1Q147U7 214 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 SPHARQ15513 63 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 LGALSLQ3ZCW2 172 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 IGSF11Q5DX21 431 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ACOT7LQ6ZUV0 252 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 JAGN1Q8N5M9 183 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 SUMF2Q8NBJ7 301 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR5H2Q8NGV7 314 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR10R2Q8NGX6 335 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR1P1Q8NH06 330 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 RITA1Q96K30 269 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 GFI1Q99684 422 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 SLC25A21Q9BQT8 299 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ELL3Q9HB65 397 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TVP23BQ9NYZ1 205 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TIMM9Q9Y5J7 89 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ICOSQ9Y6W8 199 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 DAPL1A0PJW8 107 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 IGSF23A1L1A6 192 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 CGB1A6NKQ9 187 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 MCRIP1C9JLW8 97 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PRSS46E5RG02 174 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 LYNX1G3V0Z9 82 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 GABARAPH6UMI1 98 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 SIVA1O15304 175 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 MPDU1O75352 247 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 LY6HO94772 140 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 MT-ND4LP03901 98 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 FCGR3AP08637 254 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR10J4P0C629 311 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 SFTA3P0C7M3 94 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 GADD45AP24522 165 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 HTR2CP28335 458 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 DUTP33316 252 aaKnown RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TCL1AP56279 114 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 RAP2BP61225 183 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PSG9Q00887 426 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PRCDQ00LT1 54 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PDE6HQ13956 83 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 RAB11BQ15907 218 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 COX19Q49B96 90 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PSMG4Q5JS54 123 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 LEMD1Q68G75 181 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PRSS54Q6PEW0 395 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 HIST3H2BBQ8N257 126 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TPRX1Q8N7U7 411 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM116Q8NCL8 245 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR1B1Q8NGR6 318 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR10X1Q8NGY0 326 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ADAT3Q96EY9 351 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ACY3Q96HD9 319 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PPP1R36Q96LQ0 422 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TRGV9Q99603 122 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 C12orf57Q99622 126 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 MGLLQ99685 303 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 HSPB9Q9BQS6 159 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PARP11Q9NR21 331 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 NDUFA4L2Q9NRX3 87 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 KCNIP2Q9NS61 270 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 SDHAF2Q9NX18 166 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 RHBDL2Q9NX52 303 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms