RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 DPF1Q92782 380 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 GNPNAT1Q96EK6 184 aaPredicted RBP12.56□□□□□ -0.4
SHOX-201ENST00000334060 TRAV5A0A0B4J249 113 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 WI2-2373I1.2A0A1W2PRP0 233 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 PRB4P10163 310 aaPredicted RBP12.56□□□□□ -0.4
SHOX-201ENST00000334060 TMEM183AQ8IXX5 376 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 Q8WTZ3 238 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 TMEM190Q8WZ59 177 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 RNF125Q96EQ8 232 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 SLC39A9Q9NUM3 307 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 GAGE1Q13065 139 aa12.55□□□□□ -0.4
SHOX-201ENST00000334060 SPSB3Q6PJ21 355 aa12.55□□□□□ -0.4
SHOX-201ENST00000334060 LINC00482Q8N8I6 264 aa12.55□□□□□ -0.4
SHOX-201ENST00000334060 SCGB1C1Q8TD33 95 aa12.55□□□□□ -0.4
SHOX-201ENST00000334060 FAM210BQ96KR6 192 aa12.55□□□□□ -0.4
SHOX-201ENST00000334060 GPR61Q9BZJ8 451 aa12.55□□□□□ -0.4
SHOX-201ENST00000334060 HMGB3O15347 200 aaKnown RBP12.54□□□□□ -0.4
SHOX-201ENST00000334060 SRP19P09132 144 aaKnown RBP12.54□□□□□ -0.4
SHOX-201ENST00000334060 HAGHQ16775 308 aa12.54□□□□□ -0.4
SHOX-201ENST00000334060 FFAR4Q5NUL3 377 aa12.54□□□□□ -0.4
SHOX-201ENST00000334060 SHISA2Q6UWI4 295 aa12.54□□□□□ -0.4
SHOX-201ENST00000334060 SEPSECSQ9HD40 501 aaKnown RBP12.54□□□□□ -0.4
SHOX-201ENST00000334060 VAX2Q9UIW0 290 aa12.54□□□□□ -0.4
SHOX-201ENST00000334060 TRAV30A0A087WSZ9 112 aa12.54□□□□□ -0.4
SHOX-201ENST00000334060 PF4P02776 101 aa12.54□□□□□ -0.4
SHOX-201ENST00000334060 GPHB5Q86YW7 130 aa12.54□□□□□ -0.4
SHOX-201ENST00000334060 TRAV1-1A0A0B4J248 108 aa12.53□□□□□ -0.4
SHOX-201ENST00000334060 NDUFA4O00483 81 aa12.53□□□□□ -0.4
SHOX-201ENST00000334060 OR5G3P0C626 314 aa12.53□□□□□ -0.4
SHOX-201ENST00000334060 FABP4P15090 132 aa12.53□□□□□ -0.4
SHOX-201ENST00000334060 RPL29P47914 159 aaKnown RBP12.53□□□□□ -0.4
SHOX-201ENST00000334060 HIST1H2BLQ99880 126 aa12.53□□□□□ -0.4
SHOX-201ENST00000334060 PARD6GQ9BYG4 376 aaPredicted RBP12.53□□□□□ -0.4
SHOX-201ENST00000334060 TRGC1P0CF51 173 aa12.52□□□□□ -0.4
SHOX-201ENST00000334060 ZNF726P1Q15940 193 aa12.52□□□□□ -0.4
SHOX-201ENST00000334060 OR2G3Q8NGZ4 309 aa12.52□□□□□ -0.4
SHOX-201ENST00000334060 FAM213BQ8TBF2 198 aa12.52□□□□□ -0.4
SHOX-201ENST00000334060 LINC00614P0C842 121 aa12.52□□□□□ -0.41
SHOX-201ENST00000334060 OR9G4Q8NGQ1 327 aa12.52□□□□□ -0.41
SHOX-201ENST00000334060 BTF3L4Q96K17 158 aa12.52□□□□□ -0.41
SHOX-201ENST00000334060 MRPL27Q9P0M9 148 aaKnown RBP12.52□□□□□ -0.41
SHOX-201ENST00000334060 C2orf70A6NJV1 201 aa12.51□□□□□ -0.41
SHOX-201ENST00000334060 M0R143 59 aa12.51□□□□□ -0.41
SHOX-201ENST00000334060 TRGC2P03986 189 aa12.51□□□□□ -0.41
SHOX-201ENST00000334060 CSN3P07498 182 aa12.51□□□□□ -0.41
SHOX-201ENST00000334060 MYCNOSP40205 109 aa12.51□□□□□ -0.41
SHOX-201ENST00000334060 MIR17HGQ75NE6 70 aa12.51□□□□□ -0.41
SHOX-201ENST00000334060 RPP25LQ8N5L8 163 aaKnown RBP12.51□□□□□ -0.41
SHOX-201ENST00000334060 C17orf77Q96MU5 243 aa12.51□□□□□ -0.41
SHOX-201ENST00000334060 ATP6V0BQ99437 205 aa12.51□□□□□ -0.41
SHOX-201ENST00000334060 RPRMQ9NS64 109 aa12.51□□□□□ -0.41
SHOX-201ENST00000334060 H3BTX0 84 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 CXCL1P09341 107 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 SRD5A3Q9H8P0 318 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 IGKV3-7A0A075B6H7 116 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 IZUMO1RA6ND01 250 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 OVOL1O14753 267 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 MPDU1O75352 247 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 IQCJQ1A5X6 159 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 ZNF709Q8N972 641 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 RNF2Q99496 336 aa12.5□□□□□ -0.41
SHOX-201ENST00000334060 A0A1B0GV50 99 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 GZMBP10144 247 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 FAM106AQ4KMX7 169 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 LINC00305Q7Z4B0 112 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 OR4F17Q8NGA8 305 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 OR4F4Q96R69 305 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 SLC25A39Q9BZJ4 359 aaPredicted RBP12.49□□□□□ -0.41
SHOX-201ENST00000334060 DAZ1Q9NQZ3 744 aaKnown RBP12.49□□□□□ -0.41
SHOX-201ENST00000334060 COX7A2P2O60397 106 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 IGLL1P15814 213 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 CBLN1P23435 193 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 PLP1P60201 277 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 PMS2P11Q13670 270 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 FAM78BQ5VT40 261 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 ZNF503Q96F45 646 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 ELOVL1Q9BW60 279 aa12.49□□□□□ -0.41
SHOX-201ENST00000334060 IGHV7-4-1A0A0J9YVY3 117 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 LGALS9O00182 355 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 PHOX2AO14813 284 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 HYPMO75409 117 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 CRYBB3P26998 211 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 SELENOTP62341 195 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 RAB31Q13636 194 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 ANKRD39Q53RE8 183 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 FRZBQ92765 325 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 TMEM18Q96B42 140 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 PSMG3Q9BT73 122 aaPredicted RBP12.48□□□□□ -0.41
SHOX-201ENST00000334060 RHPN1-AS1Q9BWJ2 59 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 PRO1933Q9H354 126 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 TIMM9Q9Y5J7 89 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 U3KQE9 123 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 MGAM2Q2M2H8 2515 aa12.48□□□□□ -0.41
SHOX-201ENST00000334060 TGIF2-C20orf24A0A0A6YYL0 155 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 C17orf112F2Z3M2 114 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 H3BRN7 92 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 CHEK1O14757 476 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 MBP02144 154 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 PYYP10082 97 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms