RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 HRH4Q9H3N8 390 aa10.24□□□□□ -0.77
LIMS1-201ENST00000332345 CLEC5AQ9NY25 188 aa10.24□□□□□ -0.77
LIMS1-201ENST00000332345 TRAV8-2A0A0B4J237 113 aa10.23□□□□□ -0.77
LIMS1-201ENST00000332345 TRAV5A0A0B4J249 113 aa10.23□□□□□ -0.77
LIMS1-201ENST00000332345 DUSP14O95147 198 aaKnown RBP10.23□□□□□ -0.77
LIMS1-201ENST00000332345 IGKV3-20P01619 116 aa10.23□□□□□ -0.77
LIMS1-201ENST00000332345 DEFB1P60022 68 aa10.23□□□□□ -0.77
LIMS1-201ENST00000332345 PSG3Q16557 428 aa10.23□□□□□ -0.77
LIMS1-201ENST00000332345 FAM78BQ5VT40 261 aa10.23□□□□□ -0.77
LIMS1-201ENST00000332345 IGFL4Q6B9Z1 124 aa10.23□□□□□ -0.77
LIMS1-201ENST00000332345 RNF182Q8N6D2 247 aa10.23□□□□□ -0.77
LIMS1-201ENST00000332345 INO80EQ8NBZ0 244 aaPredicted RBP10.23□□□□□ -0.77
LIMS1-201ENST00000332345 ZNF738Q8NE65 137 aa10.23□□□□□ -0.77
LIMS1-201ENST00000332345 SLC50A1Q9BRV3 221 aa10.23□□□□□ -0.77
LIMS1-201ENST00000332345 A0A0J9YWU9 116 aa10.22□□□□□ -0.77
LIMS1-201ENST00000332345 F6UB75 175 aa10.22□□□□□ -0.77
LIMS1-201ENST00000332345 IGLC2P0DOY2 106 aa10.22□□□□□ -0.77
LIMS1-201ENST00000332345 C4BPBP20851 252 aa10.22□□□□□ -0.77
LIMS1-201ENST00000332345 PSG9Q00887 426 aa10.22□□□□□ -0.77
LIMS1-201ENST00000332345 OR2T35Q8NGX2 323 aa10.22□□□□□ -0.77
LIMS1-201ENST00000332345 AQP10Q96PS8 301 aa10.22□□□□□ -0.77
LIMS1-201ENST00000332345 ZNF331Q9NQX6 463 aaPredicted RBP10.22□□□□□ -0.77
LIMS1-201ENST00000332345 TMEM14CQ9P0S9 112 aa10.22□□□□□ -0.77
LIMS1-201ENST00000332345 XCL2Q9UBD3 114 aa10.22□□□□□ -0.77
LIMS1-201ENST00000332345 H3BQ15 152 aa10.21□□□□□ -0.77
LIMS1-201ENST00000332345 SNRPCP09234 159 aaKnown RBP10.21□□□□□ -0.77
LIMS1-201ENST00000332345 ZNF266Q14584 549 aa10.21□□□□□ -0.77
LIMS1-201ENST00000332345 Q5BKY6 102 aa10.21□□□□□ -0.77
LIMS1-201ENST00000332345 GCSAMLQ5JQS6 135 aa10.21□□□□□ -0.77
LIMS1-201ENST00000332345 FFAR4Q5NUL3 377 aa10.21□□□□□ -0.77
LIMS1-201ENST00000332345 CASC10Q5T4H9 136 aa10.21□□□□□ -0.77
LIMS1-201ENST00000332345 CSNK1G2-AS1Q8NCQ2 148 aa10.21□□□□□ -0.77
LIMS1-201ENST00000332345 MRPL32Q9BYC8 188 aaKnown RBP10.21□□□□□ -0.77
LIMS1-201ENST00000332345 WFDC1Q9HC57 220 aa10.21□□□□□ -0.77
LIMS1-201ENST00000332345 HIST1H1EP10412 219 aaKnown RBP10.2□□□□□ -0.78
LIMS1-201ENST00000332345 C4orf48Q5BLP8 95 aa10.2□□□□□ -0.78
LIMS1-201ENST00000332345 RPUSD4Q96CM3 377 aaKnown RBP10.2□□□□□ -0.78
LIMS1-201ENST00000332345 SAT2Q96F10 170 aaPredicted RBP10.2□□□□□ -0.78
LIMS1-201ENST00000332345 FXYD6-FXYD2A0A087WZ82 144 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 A8MTW9 85 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 ZNF705EA8MWA4 302 aaPredicted RBP10.19□□□□□ -0.78
LIMS1-201ENST00000332345 ZNF253O75346 499 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 MIFP14174 115 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 HLA-DMBP28068 263 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 CNN1P51911 297 aaKnown RBP10.19□□□□□ -0.78
LIMS1-201ENST00000332345 FXYD7P58549 80 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 ZFAND6Q6FIF0 208 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 OR8A1Q8NGG7 326 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 MFFQ9GZY8 342 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 PPP1R14DQ9NXH3 145 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 ZNF586Q9NXT0 402 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 FUT9Q9Y231 359 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 TIMM9Q9Y5J7 89 aa10.19□□□□□ -0.78
LIMS1-201ENST00000332345 TRBV19A0A075B6N1 114 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 H3BTX0 84 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 AMBPP02760 352 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 ZNF705DP0CH99 300 aaPredicted RBP10.18□□□□□ -0.78
LIMS1-201ENST00000332345 ZNF705BP0CI00 300 aaPredicted RBP10.18□□□□□ -0.78
LIMS1-201ENST00000332345 RHOBP62745 196 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 PDE6HQ13956 83 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 ACOT6Q3I5F7 207 aaPredicted RBP10.18□□□□□ -0.78
LIMS1-201ENST00000332345 MIR17HGQ75NE6 70 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 FAM167A-AS1Q96KT0 104 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 SLC25A2Q9BXI2 301 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 SLC35B3Q9H1N7 401 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 OR51M1Q9H341 326 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 C11orf68Q9H3H3 251 aaKnown RBP10.18□□□□□ -0.78
LIMS1-201ENST00000332345 TNFSF18Q9UNG2 199 aa10.18□□□□□ -0.78
LIMS1-201ENST00000332345 SLC17A3O00476 420 aa10.17□□□□□ -0.78
LIMS1-201ENST00000332345 NBEAP1P0C6P0 100 aa10.17□□□□□ -0.78
LIMS1-201ENST00000332345 PYYP10082 97 aa10.17□□□□□ -0.78
LIMS1-201ENST00000332345 M6PRP20645 277 aa10.17□□□□□ -0.78
LIMS1-201ENST00000332345 TAS2R45P59539 299 aa10.17□□□□□ -0.78
LIMS1-201ENST00000332345 HIST1H1AQ02539 215 aaPredicted RBP10.17□□□□□ -0.78
LIMS1-201ENST00000332345 OR10J6PQ8NGY7 276 aa10.17□□□□□ -0.78
LIMS1-201ENST00000332345 PAXXQ9BUH6 204 aa10.17□□□□□ -0.78
LIMS1-201ENST00000332345 PRELID1Q9Y255 219 aa10.17□□□□□ -0.78
LIMS1-201ENST00000332345 BORCS7-ASMTA0A0B4J1R7 106 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 A0A1W2PPV4 95 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 SMIM9A6NGZ8 99 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 ZNF705FA8MVS1 300 aaPredicted RBP10.16□□□□□ -0.78
LIMS1-201ENST00000332345 AMTNQ6UX39 209 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 Q8NAQ8 132 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 BLNKQ8WV28 456 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 RNF141Q8WVD5 230 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 NEU1Q99519 415 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 AAMDCQ9H7C9 122 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 GOLT1BQ9Y3E0 138 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 X6R8D5 127 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 CSMD3Q7Z407 3707 aa10.16□□□□□ -0.78
LIMS1-201ENST00000332345 IGHV4-28A0A0C4DH34 117 aa10.15□□□□□ -0.78
LIMS1-201ENST00000332345 OR7C2O60412 319 aa10.15□□□□□ -0.78
LIMS1-201ENST00000332345 MBP02144 154 aa10.15□□□□□ -0.78
LIMS1-201ENST00000332345 SERF2P84101 59 aa10.15□□□□□ -0.78
LIMS1-201ENST00000332345 KHDC3LQ587J8 217 aa10.15□□□□□ -0.78
LIMS1-201ENST00000332345 ZNF705AQ6ZN79 300 aaPredicted RBP10.15□□□□□ -0.78
LIMS1-201ENST00000332345 HSD17B11Q8NBQ5 300 aa10.15□□□□□ -0.78
LIMS1-201ENST00000332345 C11orf45Q8TAV5 145 aa10.15□□□□□ -0.78
LIMS1-201ENST00000332345 MRPL53Q96EL3 112 aaKnown RBP10.15□□□□□ -0.78
LIMS1-201ENST00000332345 IGF2BP2-AS1Q96M15 143 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms