RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 C2orf91Q6ZV80 131 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 C5orf17Q8NAS9 161 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 RABAC1Q9UI14 185 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 CRXO43186 299 aaPredicted RBP6.3□□□□□ -1.4
VMA21-201ENST00000330374 C17orf77Q96MU5 243 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 ZNF71Q9NQZ8 489 aaPredicted RBP6.3□□□□□ -1.4
VMA21-201ENST00000330374 ACACAQ13085 2346 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 MBD3L5A6NJ08 208 aaPredicted RBP6.3□□□□□ -1.4
VMA21-201ENST00000330374 CNTFRP26992 372 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 CACNG7P62955 275 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 OSR1Q8TAX0 266 aaPredicted RBP6.3□□□□□ -1.4
VMA21-201ENST00000330374 NEU4Q8WWR8 484 aaPredicted RBP6.3□□□□□ -1.4
VMA21-201ENST00000330374 WFDC12Q8WWY7 111 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 ZGRF1Q86YA3 2104 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 K7EMI3 77 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 IGLV1-44P01699 117 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 IGLC1P0CG04 106 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 RPL24P83731 157 aaKnown RBP6.3□□□□□ -1.4
VMA21-201ENST00000330374 FER1L6-AS1Q8NA97 138 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 MBD3L2Q8NHZ7 208 aaPredicted RBP6.3□□□□□ -1.4
VMA21-201ENST00000330374 C18orf15Q96N68 181 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 MLST8Q9BVC4 326 aa6.3□□□□□ -1.4
VMA21-201ENST00000330374 A0A1B0GUT8 65 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 SMKR1H3BMG3 65 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 LHBP01229 141 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 IGHV1-46P01743 117 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 COX8AP10176 69 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 SLC25A15Q9Y619 301 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 F8W735 103 aaPredicted RBP6.29□□□□□ -1.4
VMA21-201ENST00000330374 FSTL3O95633 263 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 CSN1S1P47710 185 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 FAM71F2Q6NXP2 309 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 OR4C13Q8NGP0 309 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 CCL17Q92583 94 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 FMC1Q96HJ9 113 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 MDFIQ99750 246 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 PRSS22Q9GZN4 317 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 SPTBN1Q01082 2364 aaKnown RBP6.29□□□□□ -1.4
VMA21-201ENST00000330374 C19orf71A6NCJ1 209 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 LTAP01374 205 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 MYCNOSP40205 109 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 Q86TA4 180 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 OR10AG1Q8NH19 301 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 FAM222BQ8WU58 562 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 ZNF747Q9BV97 191 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 TTTY13Q9BZ97 58 aa6.29□□□□□ -1.4
VMA21-201ENST00000330374 TMEM238C9JI98 176 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 M0R3E3 92 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 C22orf34Q6ZV56 151 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 C1orf210Q8IVY1 113 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 TMEM213A2RRL7 107 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 D6R8Y8 96 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 PCP2Q8IVA1 136 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 NDFIP1Q9BT67 221 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 APC2O95996 2303 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 ZNF207O43670 478 aaKnown RBP6.28□□□□□ -1.4
VMA21-201ENST00000330374 LINC01545Q5VT33 79 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 ZNF788Q6ZQV5 615 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 GTF2H5Q6ZYL4 71 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 IGFBPL1Q8WX77 278 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 MS4A6AQ9H2W1 248 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 HIGD1AQ9Y241 93 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 BDP1A6H8Y1 2624 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 A0A0G2JLM5 398 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 GP9P14770 177 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 FAM27E3Q08E93 113 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 TMEM200BQ69YZ2 307 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 AMN1Q8IY45 258 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 OR1N2Q8NGR9 330 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 GUCD1Q96NT3 240 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 KLF12Q9Y4X4 402 aa6.28□□□□□ -1.4
VMA21-201ENST00000330374 GLRXP35754 106 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 VMA21Q3ZAQ7 101 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 ZNF833PQ6ZTB9 187 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 TMEM167AQ8TBQ9 72 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 RIF1Q5UIP0 2472 aaKnown RBP6.27□□□□□ -1.41
VMA21-201ENST00000330374 SPTA1P02549 2419 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 A1L4Q6 167 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 RIGQ13278 110 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 ZNF474Q6S9Z5 364 aaPredicted RBP6.27□□□□□ -1.41
VMA21-201ENST00000330374 LYPD2Q6UXB3 125 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 TNRC18O15417 2968 aaPredicted RBP6.27□□□□□ -1.41
VMA21-201ENST00000330374 A6NDN8 102 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 GCSHP23434 173 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 PLGLAQ15195 96 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 C1orf185Q5T7R7 199 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 ZADH2Q8N4Q0 377 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 OR2K2Q8NGT1 345 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 VSTM2AQ8TAG5 236 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 SMIM12Q96EX1 92 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 C8orf49Q96NF6 230 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 SPCS1Q9Y6A9 102 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 VCYO14598 125 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 GNG7O60262 68 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 RPL27AP46776 148 aaKnown RBP6.27□□□□□ -1.41
VMA21-201ENST00000330374 THAP8Q8NA92 274 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 TTC28Q96AY4 2481 aa6.27□□□□□ -1.41
VMA21-201ENST00000330374 BMI1P35226 326 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 MEF2CQ06413 473 aaPredicted RBP6.26□□□□□ -1.41
VMA21-201ENST00000330374 TIMM23BQ5SRD1 257 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms