RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 MORN5Q5VZ52 161 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 ARL6IP6Q8N6S5 226 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 HIST1H2BAQ96A08 127 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 C7orf77A4D0Y5 90 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 CXorf65A6NEN9 183 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 C9JCJ5 164 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 NDUFA4O00483 81 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 PRB2P02812 416 aaPredicted RBP12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 IGLL1P15814 213 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 CDX1P47902 265 aaPredicted RBP12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 ATRAIDQ6UW56 229 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 TOMM20LQ6UXN7 152 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 LINC00482Q8N8I6 264 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 OR5B12Q96R08 314 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 CTDSP1Q9GZU7 261 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 S4R3C0 116 aa12.59□□□□□ -0.39
PDLIM1-201ENST00000329399 NDUFB4O95168 129 aa12.58□□□□□ -0.4
PDLIM1-201ENST00000329399 IGHV3-23P01764 117 aa12.58□□□□□ -0.4
PDLIM1-201ENST00000329399 ARL3P36405 182 aa12.58□□□□□ -0.4
PDLIM1-201ENST00000329399 MYCNOSP40205 109 aa12.58□□□□□ -0.4
PDLIM1-201ENST00000329399 SUMO1P63165 101 aaKnown RBP12.58□□□□□ -0.4
PDLIM1-201ENST00000329399 BTN1A1Q13410 526 aa12.58□□□□□ -0.4
PDLIM1-201ENST00000329399 USF2Q15853 346 aaPredicted RBP12.58□□□□□ -0.4
PDLIM1-201ENST00000329399 METTL26Q96S19 204 aa12.58□□□□□ -0.4
PDLIM1-201ENST00000329399 RPS10P5Q9NQ39 176 aa12.58□□□□□ -0.4
PDLIM1-201ENST00000329399 WIPF1O43516 503 aa12.57□□□□□ -0.4
PDLIM1-201ENST00000329399 ZNF253O75346 499 aa12.57□□□□□ -0.4
PDLIM1-201ENST00000329399 PF4P02776 101 aa12.57□□□□□ -0.4
PDLIM1-201ENST00000329399 PYYP10082 97 aa12.57□□□□□ -0.4
PDLIM1-201ENST00000329399 TAS2R60P59551 318 aa12.57□□□□□ -0.4
PDLIM1-201ENST00000329399 BEAN1Q3B7T3 259 aa12.57□□□□□ -0.4
PDLIM1-201ENST00000329399 ZFAND3Q9H8U3 227 aa12.57□□□□□ -0.4
PDLIM1-201ENST00000329399 OTORQ9NRC9 128 aa12.57□□□□□ -0.4
PDLIM1-201ENST00000329399 HELTA6NFD8 242 aa12.56□□□□□ -0.4
PDLIM1-201ENST00000329399 CCL24O00175 119 aa12.56□□□□□ -0.4
PDLIM1-201ENST00000329399 GGCTO75223 188 aaKnown RBP12.56□□□□□ -0.4
PDLIM1-201ENST00000329399 MT-ND4LP03901 98 aa12.56□□□□□ -0.4
PDLIM1-201ENST00000329399 NPPCP23582 126 aa12.56□□□□□ -0.4
PDLIM1-201ENST00000329399 PSG9Q00887 426 aa12.56□□□□□ -0.4
PDLIM1-201ENST00000329399 ZNF674Q2M3X9 581 aa12.56□□□□□ -0.4
PDLIM1-201ENST00000329399 C5orf17Q8NAS9 161 aa12.56□□□□□ -0.4
PDLIM1-201ENST00000329399 SMIM12Q96EX1 92 aa12.56□□□□□ -0.4
PDLIM1-201ENST00000329399 GGTLC3B5MD39 225 aa12.55□□□□□ -0.4
PDLIM1-201ENST00000329399 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
PDLIM1-201ENST00000329399 SCO1O75880 301 aa12.55□□□□□ -0.4
PDLIM1-201ENST00000329399 IGLC2P0DOY2 106 aa12.55□□□□□ -0.4
PDLIM1-201ENST00000329399 CD33P20138 364 aa12.55□□□□□ -0.4
PDLIM1-201ENST00000329399 CRYBB3P26998 211 aa12.55□□□□□ -0.4
PDLIM1-201ENST00000329399 ANAPC16Q96DE5 110 aa12.55□□□□□ -0.4
PDLIM1-201ENST00000329399 CLEC5AQ9NY25 188 aa12.55□□□□□ -0.4
PDLIM1-201ENST00000329399 PEF1Q9UBV8 284 aaKnown RBP12.55□□□□□ -0.4
PDLIM1-201ENST00000329399 TRBV19A0A075B6N1 114 aa12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 SCO2A0A1W2PP80 73 aa12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 DNASE2O00115 360 aaPredicted RBP12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 TSPAN4O14817 238 aa12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 CNN1P51911 297 aaKnown RBP12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 KPRPQ5T749 579 aaPredicted RBP12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 OR8I2Q8N0Y5 310 aa12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 C2CD4CQ8TF44 421 aa12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 C4orf3Q8WVX3 66 aa12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 UBE2E2Q96LR5 201 aa12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 EPDR1Q9UM22 224 aa12.54□□□□□ -0.4
PDLIM1-201ENST00000329399 SERTM2A0A1B0GWG4 89 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 A0A1W2PS18 150 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 MRPS12O15235 138 aaKnown RBP12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 IGHV3-11P01762 117 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 GALR1P47211 349 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 RANP62826 216 aaKnown RBP12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 RPL23P62829 140 aaKnown RBP12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 FAM106AQ4KMX7 169 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 C15orf54Q8N8G6 183 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 ELOVL1Q9BW60 279 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 U3KQE9 123 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 A0A087X0K7 114 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 PGPA6NDG6 321 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 FBLL1A6NHQ2 334 aaKnown RBP12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 K7EMT4 169 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 BUB3O43684 328 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 BMI1P35226 326 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 RPL35P42766 123 aaKnown RBP12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 GPHB5Q86YW7 130 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 OR11H1Q8NG94 326 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 CMTM2Q8TAZ6 248 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 BLNKQ8WV28 456 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 GRAMD2BQ96HH9 432 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 ZNF414Q96IQ9 312 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 ATG101Q9BSB4 218 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 Q9H3A6 140 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 ZNF586Q9NXT0 402 aa12.53□□□□□ -0.4
PDLIM1-201ENST00000329399 K7EQM0 130 aa12.52□□□□□ -0.41
PDLIM1-201ENST00000329399 PEX7O00628 323 aa12.52□□□□□ -0.41
PDLIM1-201ENST00000329399 SLC25A5P05141 298 aaKnown RBP12.52□□□□□ -0.41
PDLIM1-201ENST00000329399 ATF4P18848 351 aaPredicted RBP12.52□□□□□ -0.41
PDLIM1-201ENST00000329399 AKR1C3P42330 323 aa12.52□□□□□ -0.41
PDLIM1-201ENST00000329399 KRTAP10-11P60412 298 aa12.52□□□□□ -0.41
PDLIM1-201ENST00000329399 FHL3Q13643 280 aa12.52□□□□□ -0.41
PDLIM1-201ENST00000329399 ADIRFQ15847 76 aa12.52□□□□□ -0.41
PDLIM1-201ENST00000329399 LEMD1Q68G75 181 aa12.52□□□□□ -0.41
PDLIM1-201ENST00000329399 BIN3Q9NQY0 253 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms