RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 OR10G9Q8NGN4 311 aa7.8□□□□□ -1.16
HMGB3-201ENST00000325307 OR10G7Q8NGN6 311 aa7.8□□□□□ -1.16
HMGB3-201ENST00000325307 VAX2Q9UIW0 290 aa7.8□□□□□ -1.16
HMGB3-201ENST00000325307 TRAV30A0A087WSZ9 112 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 A0A0G2JLM5 398 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 RPL15P61313 204 aaKnown RBP7.79□□□□□ -1.16
HMGB3-201ENST00000325307 C1orf194Q5T5A4 169 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 ZNF502Q8TBZ5 544 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 USMG5Q96IX5 58 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 OR5B12Q96R08 314 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 NF1P21359 2839 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 TRBV7-1A0A0A6YYK4 115 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 IGHV3-35A0A0C4DH35 117 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 C20orf202A1L168 122 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 KHDC1LQ5JSQ8 128 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 TVP23CQ96ET8 276 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 ANK3Q12955 4377 aaKnown RBP7.79□□□□□ -1.16
HMGB3-201ENST00000325307 A0A1W2PPV4 95 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 IGKV1-17P01599 117 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 OR5G3P0C626 314 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 ORM2P19652 201 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 KLHDC1Q8N7A1 406 aa7.79□□□□□ -1.16
HMGB3-201ENST00000325307 HAX1O00165 279 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 COX7A2P2O60397 106 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 PSMB8P28062 276 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 PRR20EP86478 221 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 PRR20CP86479 221 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 PRR20DP86480 221 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 PRR20BP86481 221 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 PRR20AP86496 221 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 PMS2P11Q13670 270 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 OR1B1Q8NGR6 318 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 CCDC140Q96MF4 163 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 SETD2Q9BYW2 2564 aaPredicted RBP7.78□□□□□ -1.16
HMGB3-201ENST00000325307 M0QZ24 198 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 PSG1P11464 419 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 LYZP61626 148 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 MAST4O15021 2626 aa7.78□□□□□ -1.16
HMGB3-201ENST00000325307 CTXND1A0A1B0GTU2 59 aa7.77□□□□□ -1.16
HMGB3-201ENST00000325307 F8W735 103 aaPredicted RBP7.77□□□□□ -1.16
HMGB3-201ENST00000325307 ELANEP08246 267 aa7.77□□□□□ -1.16
HMGB3-201ENST00000325307 FOXE3Q13461 319 aa7.77□□□□□ -1.16
HMGB3-201ENST00000325307 KLK9Q2XQG4 91 aa7.77□□□□□ -1.16
HMGB3-201ENST00000325307 LINC01551Q86U37 167 aa7.77□□□□□ -1.16
HMGB3-201ENST00000325307 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.16
HMGB3-201ENST00000325307 CHRDL1Q9BU40 450 aa7.77□□□□□ -1.16
HMGB3-201ENST00000325307 KLK9Q9UKQ9 250 aa7.77□□□□□ -1.16
HMGB3-201ENST00000325307 TEP1Q99973 2627 aaKnown RBP7.77□□□□□ -1.16
HMGB3-201ENST00000325307 JMJD1CQ15652 2540 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 A4D1N5 150 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 H0Y8G0 127 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 OR5I1Q13606 314 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 OR4X2Q8NGF9 303 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 ORAOV1Q8WV07 137 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 PPP5D1E7EU14 171 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 TOMM40O96008 361 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 CTSGP08311 255 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 ARL3P36405 182 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 PSG3Q16557 428 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 PDZD11Q5EBL8 140 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 SRD5A3Q9H8P0 318 aa7.77□□□□□ -1.17
HMGB3-201ENST00000325307 TMEM89A2RUT3 159 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 IL4P05112 153 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 PNRC1Q12796 327 aaPredicted RBP7.76□□□□□ -1.17
HMGB3-201ENST00000325307 FAM78BQ5VT40 261 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 OR51G1Q8NGK1 321 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 LINC01006Q8NI28 216 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 IGHV3OR16-8A0A075B7F1 116 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 HYPMO75409 117 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 RHOBP62745 196 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 C10orf113Q5VZT2 155 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 C11orf44Q8N8P7 122 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 OR1L4Q8NGR5 311 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 OR4F5Q8NH21 305 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 AURKAIP1Q9NWT8 199 aaPredicted RBP7.76□□□□□ -1.17
HMGB3-201ENST00000325307 CUBNO60494 3623 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 FCGR2BP31994 310 aaPredicted RBP7.76□□□□□ -1.17
HMGB3-201ENST00000325307 ADMP35318 185 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 YPEL3P61236 119 aaPredicted RBP7.76□□□□□ -1.17
HMGB3-201ENST00000325307 TCF24Q7RTU0 167 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 UHRF2Q96PU4 802 aa7.76□□□□□ -1.17
HMGB3-201ENST00000325307 TRBV12-3P01733 135 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 MEF2BQ02080 365 aaPredicted RBP7.75□□□□□ -1.17
HMGB3-201ENST00000325307 CTDSP1Q9GZU7 261 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 CRYBA4P53673 196 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 UBE2V1Q13404 147 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 OCIAD2Q56VL3 154 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 SPATA31B1PQ5VZV4 182 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 RNF125Q96EQ8 232 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 C16orf95Q9H693 158 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 RNF114Q9Y508 228 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 TNFRSF18Q9Y5U5 241 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 NIPBLQ6KC79 2804 aaeCLIP7.75□□□□□ -1.17
HMGB3-201ENST00000325307 NPPCP23582 126 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 ZNF491Q8N8L2 437 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 TMEM37Q8WXS4 190 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 HIGD1AQ9Y241 93 aa7.75□□□□□ -1.17
HMGB3-201ENST00000325307 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.74□□□□□ -1.17
HMGB3-201ENST00000325307 NDUFA7O95182 113 aa7.74□□□□□ -1.17
HMGB3-201ENST00000325307 STAG3L2P0CL84 134 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms