RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 WNT10AQ9GZT5 417 aa10.01□□□□□ -0.81
DDX39A-202ENST00000324340 LSM4Q9Y4Z0 139 aaKnown RBP10.01□□□□□ -0.81
DDX39A-202ENST00000324340 FLNAP21333 2647 aaKnown RBP10□□□□□ -0.81
DDX39A-202ENST00000324340 SH2D7A6NKC9 451 aaPredicted RBP10□□□□□ -0.81
DDX39A-202ENST00000324340 HLA-DQA1P01909 254 aa10□□□□□ -0.81
DDX39A-202ENST00000324340 KRTDAPP60985 99 aa10□□□□□ -0.81
DDX39A-202ENST00000324340 BLCAPP62952 87 aa10□□□□□ -0.81
DDX39A-202ENST00000324340 SCGB2A2Q13296 93 aa10□□□□□ -0.81
DDX39A-202ENST00000324340 ETFRF1Q6IPR1 90 aa10□□□□□ -0.81
DDX39A-202ENST00000324340 TREML4Q6UXN2 200 aa10□□□□□ -0.81
DDX39A-202ENST00000324340 FAM110DQ8TAY7 271 aaPredicted RBP10□□□□□ -0.81
DDX39A-202ENST00000324340 VPS25Q9BRG1 176 aa10□□□□□ -0.81
DDX39A-202ENST00000324340 CST9LQ9H4G1 147 aa10□□□□□ -0.81
DDX39A-202ENST00000324340 FNDC4Q9H6D8 234 aaPredicted RBP10□□□□□ -0.81
DDX39A-202ENST00000324340 SLC25A22Q9H936 323 aa10□□□□□ -0.81
DDX39A-202ENST00000324340 NPVFQ9HCQ7 196 aa10□□□□□ -0.81
DDX39A-202ENST00000324340 ZNF469Q96JG9 3925 aaPredicted RBP9.99□□□□□ -0.81
DDX39A-202ENST00000324340 AKAP9Q99996 3911 aa9.99□□□□□ -0.81
DDX39A-202ENST00000324340 CSPG4Q6UVK1 2322 aa9.99□□□□□ -0.81
DDX39A-202ENST00000324340 IGLV11-55A0A075B6I3 123 aa9.99□□□□□ -0.81
DDX39A-202ENST00000324340 NBEAP1P0C6P0 100 aa9.99□□□□□ -0.81
DDX39A-202ENST00000324340 LINC00869P0C866 280 aa9.99□□□□□ -0.81
DDX39A-202ENST00000324340 AMTP48728 403 aa9.99□□□□□ -0.81
DDX39A-202ENST00000324340 UNQ5815/PRO19632Q6UWF5 114 aa9.99□□□□□ -0.81
DDX39A-202ENST00000324340 BORCS7Q96B45 105 aa9.99□□□□□ -0.81
DDX39A-202ENST00000324340 FANCD2OSQ96PS1 177 aa9.99□□□□□ -0.81
DDX39A-202ENST00000324340 CELSR1Q9NYQ6 3014 aa9.99□□□□□ -0.81
DDX39A-202ENST00000324340 A0A1W2PS18 150 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 GRIFINA4D1Z8 144 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 TMEM238C9JI98 176 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 I3L2K1 104 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 NDUFB4O95168 129 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 BRI3O95415 125 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 MT-CO2P00403 227 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 DEFA4P12838 97 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 OPRK1P41145 380 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 MLANAQ16655 118 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 NUDT11Q96G61 164 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 NPCDR1Q9BY65 106 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 GNB4Q9HAV0 340 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 ST20Q9HBF5 79 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 OSTCQ9NRP0 149 aa9.98□□□□□ -0.81
DDX39A-202ENST00000324340 NAV3Q8IVL0 2385 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 TRAV41A0A0B4J266 112 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 A0A1B0GUS0 222 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 G3V318 75 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 CXorf1O96002 111 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 C3orf79P0CE67 100 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 CBLN1P23435 193 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 VAMP3Q15836 100 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 ECSCRQ19T08 205 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 TEPPQ6URK8 271 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 C12orf54Q6X4T0 127 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 Q6ZS46 218 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 TMEM116Q8NCL8 245 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 OR4F17Q8NGA8 305 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 WIPF2Q8TF74 440 aaPredicted RBP9.97□□□□□ -0.81
DDX39A-202ENST00000324340 UHRF2Q96PU4 802 aa9.97□□□□□ -0.81
DDX39A-202ENST00000324340 IGKV1OR2-108A0A075B7D4 117 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 SNURFLB1AK76 121 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 K7EIM0 57 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 SCGB1A1P11684 91 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 PRR27Q6MZM9 219 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 NIT1Q86X76 327 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 Q8N2B8 174 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 DEFB125Q8N687 156 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 THAP8Q8NA92 274 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 OR2T6Q8NHC8 308 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 MGST2Q99735 147 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 NPFFR1Q9GZQ6 430 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 THYN1Q9P016 225 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 MRPL36Q9P0J6 103 aaKnown RBP9.96□□□□□ -0.82
DDX39A-202ENST00000324340 OTOGQ6ZRI0 2925 aa9.96□□□□□ -0.82
DDX39A-202ENST00000324340 SVEP1Q4LDE5 3571 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 A0A1W2PPV4 95 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 DNAJC9-AS1A6NH13 148 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 CBY3A6NI87 242 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 STAG3L2P0CL84 134 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 STAG3L3P0CL85 134 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 SRD5A1P18405 259 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 PPIFP30405 207 aaKnown RBP9.95□□□□□ -0.82
DDX39A-202ENST00000324340 HINT1P49773 126 aaPredicted RBP9.95□□□□□ -0.82
DDX39A-202ENST00000324340 CFHR3Q02985 330 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 KLF5Q13887 457 aaPredicted RBP9.95□□□□□ -0.82
DDX39A-202ENST00000324340 RNF151Q2KHN1 245 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 OCC1Q8TAD7 63 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 GATAD1Q8WUU5 269 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 PMCHL2Q9BQD1 86 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 GGTLC1Q9BX51 225 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 PRSS22Q9GZN4 317 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 TNFRSF19Q9NS68 423 aa9.95□□□□□ -0.82
DDX39A-202ENST00000324340 IGKV1D-37A0A075B6S9 117 aa9.94□□□□□ -0.82
DDX39A-202ENST00000324340 H3BUA1 57 aa9.94□□□□□ -0.82
DDX39A-202ENST00000324340 RAB31Q13636 194 aa9.94□□□□□ -0.82
DDX39A-202ENST00000324340 MRPL54Q6P161 138 aaKnown RBP9.94□□□□□ -0.82
DDX39A-202ENST00000324340 TMEM136Q6ZRR5 245 aa9.94□□□□□ -0.82
DDX39A-202ENST00000324340 NPIPB3Q92617 1050 aa9.94□□□□□ -0.82
DDX39A-202ENST00000324340 ZNF702PQ9H963 129 aa9.94□□□□□ -0.82
DDX39A-202ENST00000324340 CD33P20138 364 aa9.93□□□□□ -0.82
DDX39A-202ENST00000324340 PRR20EP86478 221 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms