RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 APOHP02749 345 aaPredicted RBP15.7■□□□□ 0.1
CRLF3-201ENST00000324238 IL4P05112 153 aa15.7■□□□□ 0.1
CRLF3-201ENST00000324238 CRYGBP07316 175 aa15.7■□□□□ 0.1
CRLF3-201ENST00000324238 PCP4P48539 62 aa15.7■□□□□ 0.1
CRLF3-201ENST00000324238 CRIP1P50238 77 aa15.7■□□□□ 0.1
CRLF3-201ENST00000324238 ARF6P62330 175 aa15.69■□□□□ 0.1
CRLF3-201ENST00000324238 TIMM23O14925 209 aa15.69■□□□□ 0.1
CRLF3-201ENST00000324238 IGLV1-47P01700 117 aa15.69■□□□□ 0.1
CRLF3-201ENST00000324238 CDSNQ15517 529 aa15.69■□□□□ 0.1
CRLF3-201ENST00000324238 I3L2K1 104 aa15.69■□□□□ 0.1
CRLF3-201ENST00000324238 KLRD1Q13241 179 aa15.69■□□□□ 0.1
CRLF3-201ENST00000324238 ORAOV1Q8WV07 137 aa15.68■□□□□ 0.1
CRLF3-201ENST00000324238 OTORQ9NRC9 128 aa15.68■□□□□ 0.1
CRLF3-201ENST00000324238 VPS13CQ709C8 3753 aa15.68■□□□□ 0.1
CRLF3-201ENST00000324238 PPIAL4CA0A0B4J2A2 164 aa15.68■□□□□ 0.1
CRLF3-201ENST00000324238 OR2T8A6NH00 312 aa15.68■□□□□ 0.1
CRLF3-201ENST00000324238 PPIAL4GP0DN37 164 aa15.68■□□□□ 0.1
CRLF3-201ENST00000324238 RNF151Q2KHN1 245 aa15.68■□□□□ 0.1
CRLF3-201ENST00000324238 WFDC3Q8IUB2 231 aa15.68■□□□□ 0.1
CRLF3-201ENST00000324238 LOC105371242A0A075B767 164 aa15.67■□□□□ 0.1
CRLF3-201ENST00000324238 TMEM213A2RRL7 107 aa15.67■□□□□ 0.1
CRLF3-201ENST00000324238 UBE2V1Q13404 147 aa15.67■□□□□ 0.1
CRLF3-201ENST00000324238 NGBQ9NPG2 151 aa15.67■□□□□ 0.1
CRLF3-201ENST00000324238 OVOL3O00110 214 aa15.67■□□□□ 0.1
CRLF3-201ENST00000324238 CD3EP07766 207 aa15.67■□□□□ 0.1
CRLF3-201ENST00000324238 HES1Q14469 280 aa15.67■□□□□ 0.1
CRLF3-201ENST00000324238 ASCL5Q7RTU5 278 aa15.67■□□□□ 0.1
CRLF3-201ENST00000324238 ZNF492Q9P255 531 aa15.67■□□□□ 0.1
CRLF3-201ENST00000324238 A0A1B0GUT8 65 aa15.66■□□□□ 0.1
CRLF3-201ENST00000324238 OR8A1Q8NGG7 326 aa15.66■□□□□ 0.1
CRLF3-201ENST00000324238 NEU4Q8WWR8 484 aaPredicted RBP15.66■□□□□ 0.1
CRLF3-201ENST00000324238 MAP1LC3CQ9BXW4 147 aa15.66■□□□□ 0.1
CRLF3-201ENST00000324238 PSG8Q9UQ74 426 aa15.66■□□□□ 0.1
CRLF3-201ENST00000324238 K7EIM0 57 aa15.66■□□□□ 0.1
CRLF3-201ENST00000324238 IFI27P40305 119 aaPredicted RBP15.66■□□□□ 0.1
CRLF3-201ENST00000324238 FAM71F2Q6NXP2 309 aa15.66■□□□□ 0.1
CRLF3-201ENST00000324238 PRSS3P2Q8NHM4 247 aa15.66■□□□□ 0.1
CRLF3-201ENST00000324238 TRBV19A0A075B6N1 114 aa15.65■□□□□ 0.1
CRLF3-201ENST00000324238 SMKR1H3BMG3 65 aa15.65■□□□□ 0.1
CRLF3-201ENST00000324238 SLC25A34Q6PIV7 304 aa15.65■□□□□ 0.1
CRLF3-201ENST00000324238 OR4C5Q8NGB2 326 aa15.65■□□□□ 0.1
CRLF3-201ENST00000324238 APOBEC3AP31941 199 aaPredicted RBP15.65■□□□□ 0.1
CRLF3-201ENST00000324238 CHCHD1Q96BP2 118 aaKnown RBP15.65■□□□□ 0.1
CRLF3-201ENST00000324238 TMEM191AQ9H0A3 160 aa15.65■□□□□ 0.1
CRLF3-201ENST00000324238 HSBP1L1C9JCN9 74 aa15.64■□□□□ 0.09
CRLF3-201ENST00000324238 HLA-DRB1P01911 266 aa15.64■□□□□ 0.09
CRLF3-201ENST00000324238 CBY1Q9Y3M2 126 aa15.64■□□□□ 0.09
CRLF3-201ENST00000324238 Q8TAT8 98 aa15.64■□□□□ 0.09
CRLF3-201ENST00000324238 IGKV2-40A0A087WW87 121 aaPredicted RBP15.63■□□□□ 0.09
CRLF3-201ENST00000324238 NPIPB6E9PJ23 425 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 IGKV2D-40P01614 121 aaPredicted RBP15.63■□□□□ 0.09
CRLF3-201ENST00000324238 SIGLEC15Q6ZMC9 328 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 BPIFA4PQ86YQ2 179 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 ZNF491Q8N8L2 437 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 NDFIP1Q9BT67 221 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 KAAG1Q9UBP8 84 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 LIPFP07098 398 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 OR5AL1P0C617 328 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 HLA-DMBP28068 263 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 CT83Q5H943 113 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 AMN1Q8IY45 258 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 NAA38Q9BRA0 125 aaKnown RBP15.63■□□□□ 0.09
CRLF3-201ENST00000324238 AP5S1Q9NUS5 200 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 HAX1O00165 279 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 UQCRFS1P47985 274 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 PLP1P60201 277 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 BVES-AS1Q5T3Y7 98 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 C8orf31Q8N9H6 132 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 RNF125Q96EQ8 232 aa15.63■□□□□ 0.09
CRLF3-201ENST00000324238 TAX1BP3O14907 124 aa15.62■□□□□ 0.09
CRLF3-201ENST00000324238 CRXO43186 299 aaPredicted RBP15.62■□□□□ 0.09
CRLF3-201ENST00000324238 RELQ04864 619 aaPredicted RBP15.62■□□□□ 0.09
CRLF3-201ENST00000324238 JKAMPQ9P055 326 aa15.62■□□□□ 0.09
CRLF3-201ENST00000324238 D6R8Y8 96 aa15.62■□□□□ 0.09
CRLF3-201ENST00000324238 PVRIGQ6DKI7 326 aa15.62■□□□□ 0.09
CRLF3-201ENST00000324238 LYZL1Q6UWQ5 148 aa15.62■□□□□ 0.09
CRLF3-201ENST00000324238 SHANK2-AS3Q9BTD1 123 aa15.62■□□□□ 0.09
CRLF3-201ENST00000324238 ST20Q9HBF5 79 aa15.62■□□□□ 0.09
CRLF3-201ENST00000324238 FA2HQ7L5A8 372 aa15.61■□□□□ 0.09
CRLF3-201ENST00000324238 CCL21O00585 134 aa15.61■□□□□ 0.09
CRLF3-201ENST00000324238 RBPJQ06330 500 aa15.61■□□□□ 0.09
CRLF3-201ENST00000324238 AMMECR1LQ6DCA0 310 aa15.61■□□□□ 0.09
CRLF3-201ENST00000324238 TMEM75Q8N9X5 138 aa15.61■□□□□ 0.09
CRLF3-201ENST00000324238 GFRA4Q9GZZ7 299 aa15.61■□□□□ 0.09
CRLF3-201ENST00000324238 SMIM12Q96EX1 92 aa15.6■□□□□ 0.09
CRLF3-201ENST00000324238 HIVEP3Q5T1R4 2406 aa15.6■□□□□ 0.09
CRLF3-201ENST00000324238 ZNF672Q499Z4 452 aaPredicted RBP15.6■□□□□ 0.09
CRLF3-201ENST00000324238 SCRT2Q9NQ03 307 aa15.6■□□□□ 0.09
CRLF3-201ENST00000324238 GNG7O60262 68 aa15.6■□□□□ 0.09
CRLF3-201ENST00000324238 PSG3Q16557 428 aa15.6■□□□□ 0.09
CRLF3-201ENST00000324238 ZNF414Q96IQ9 312 aa15.6■□□□□ 0.09
CRLF3-201ENST00000324238 NCBP2LA6PVI3 153 aaKnown RBP15.59■□□□□ 0.09
CRLF3-201ENST00000324238 SOX21Q9Y651 276 aaPredicted RBP15.59■□□□□ 0.09
CRLF3-201ENST00000324238 RBX1P62877 108 aa15.59■□□□□ 0.09
CRLF3-201ENST00000324238 RIGQ13278 110 aa15.59■□□□□ 0.09
CRLF3-201ENST00000324238 ZNF747Q9BV97 191 aa15.59■□□□□ 0.09
CRLF3-201ENST00000324238 IGHV3OR16-13A0A075B7E8 117 aa15.58■□□□□ 0.09
CRLF3-201ENST00000324238 IGHV3-74A0A0B4J1X5 117 aa15.58■□□□□ 0.09
CRLF3-201ENST00000324238 B9A039 149 aa15.58■□□□□ 0.09
CRLF3-201ENST00000324238 H3BRN7 92 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms