RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 MYMXA0A1B0GTQ4 84 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 IQCF6A8MYZ5 107 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 RPL32P62910 135 aaKnown RBP5.8□□□□□ -1.48
SMC1A-201ENST00000322213 EBLN2Q6P2I7 272 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 PPP1R27Q86WC6 154 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 NABP1Q96AH0 204 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 TMEM14BQ9NUH8 114 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 GGTLC3B5MD39 225 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 INAFM2P0DMQ5 153 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 HLA-DMBP28068 263 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 VDAC2P45880 294 aaPredicted RBP5.8□□□□□ -1.48
SMC1A-201ENST00000322213 SNRPD3P62318 126 aaKnown RBP5.8□□□□□ -1.48
SMC1A-201ENST00000322213 ZNF726P1Q15940 193 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 C5orf64Q2M2E5 130 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 ABCA12Q86UK0 2595 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 LPAL2Q16609 132 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 LYPD1Q8N2G4 141 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 UTRNP46939 3433 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 UPK2O00526 184 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 NPFFO15130 113 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 CD69Q07108 199 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 RBMY1BA6NDE4 496 aaKnown RBP5.8□□□□□ -1.48
SMC1A-201ENST00000322213 RBMY1EA6NEQ0 496 aaKnown RBP5.8□□□□□ -1.48
SMC1A-201ENST00000322213 RBMY1DP0C7P1 496 aaKnown RBP5.8□□□□□ -1.48
SMC1A-201ENST00000322213 RBMY1A1P0DJD3 496 aaKnown RBP5.8□□□□□ -1.48
SMC1A-201ENST00000322213 RBMY1CP0DJD4 496 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 CNTFRP26992 372 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 PDE6HQ13956 83 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 CSRP1P21291 193 aaKnown RBP5.8□□□□□ -1.48
SMC1A-201ENST00000322213 SPATA31B1PQ5VZV4 182 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 TMEM42Q69YG0 159 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 FOXI2Q6ZQN5 318 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 ZNF784Q8NCA9 323 aaPredicted RBP5.8□□□□□ -1.48
SMC1A-201ENST00000322213 ZNRF1Q8ND25 227 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 RNF125Q96EQ8 232 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 JMJD8Q96S16 334 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 SCRT1Q9BWW7 348 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 TMEM74BQ9NUR3 256 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 LINC00312Q9Y6C7 94 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 TAX1BP3O14907 124 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 COX6A1P12074 109 aa5.8□□□□□ -1.48
SMC1A-201ENST00000322213 CTSBP07858 339 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 ZNF492Q9P255 531 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 SPEM2Q0P670 501 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 Q6ZT83 130 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 ATP6V0E2Q8NHE4 81 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 FBXL15Q9H469 300 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 EFEMP2O95967 443 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 CRYGSP22914 178 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 SHISA5Q8N114 240 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 FAM214BQ7L5A3 538 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 SIGLEC8Q9NYZ4 499 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 NTF4P34130 210 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 CEACAM4O75871 244 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 ZC2HC1BQ5TFG8 222 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 COL4A3Q01955 1670 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 COL4A6Q14031 1691 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 IL15RAQ13261 267 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 PMS2CLQ68D20 193 aa5.79□□□□□ -1.48
SMC1A-201ENST00000322213 ZNF138P52744 262 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 TDHQ8IZJ6 230 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 SLC25A15Q9Y619 301 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 Q86TA4 180 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 EXOC3-AS1Q8N2X6 119 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 EEF1AKMT3Q96AZ1 226 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 TCRAP04437 139 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 FLVCR1-AS1Q8TAF5 88 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 HES7Q9BYE0 225 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 PSG8Q9UQ74 426 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 ETV2O00321 342 aaPredicted RBP5.78□□□□□ -1.48
SMC1A-201ENST00000322213 TMEM158Q8WZ71 300 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 SLC50A1Q9BRV3 221 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 IGKV1-12A0A0C4DH73 117 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 C5orf67F2Z3F1 127 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 GHRHP01286 108 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 IGKV1D-12P01611 117 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 C1orf162Q8NEQ5 155 aaPredicted RBP5.78□□□□□ -1.48
SMC1A-201ENST00000322213 C11orf52Q96A22 123 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 PRR33A8MZF0 331 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 C1orf53Q5VUE5 145 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 LYZL1Q6UWQ5 148 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 PLEKHB2Q96CS7 222 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 K7EN84 100 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 RNASE4P34096 147 aaKnown RBP5.78□□□□□ -1.48
SMC1A-201ENST00000322213 ITLN1Q8WWA0 313 aa5.78□□□□□ -1.48
SMC1A-201ENST00000322213 NCR2O95944 276 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 CELA2AP08217 269 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 NDUFV3P56181 108 aaKnown RBP5.77□□□□□ -1.49
SMC1A-201ENST00000322213 LINC01545Q5VT33 79 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 NEGR1Q7Z3B1 354 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 LCNL1Q6ZST4 164 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 TNFRSF18Q9Y5U5 241 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 GFRA3O60609 400 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 NPPCP23582 126 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 CFHR2P36980 270 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 PAX9P55771 341 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 Q6ZS52 159 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 ZNF114Q8NC26 417 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 MRPL20Q9BYC9 149 aaKnown RBP5.77□□□□□ -1.49
SMC1A-201ENST00000322213 C8orf86Q6ZUL3 223 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms