RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 TRAV40A0A0B4J280 105 aa9.96□□□□□ -0.81
FARP1-201ENST00000319562 FCN3O75636 299 aa9.96□□□□□ -0.81
FARP1-201ENST00000319562 ZNF883P0CG24 379 aa9.96□□□□□ -0.81
FARP1-201ENST00000319562 AMN1Q8IY45 258 aa9.96□□□□□ -0.81
FARP1-201ENST00000319562 SRSF8Q9BRL6 282 aaKnown RBP9.96□□□□□ -0.81
FARP1-201ENST00000319562 HAMPP81172 84 aa9.96□□□□□ -0.81
FARP1-201ENST00000319562 C9orf106Q8NAJ2 232 aa9.96□□□□□ -0.81
FARP1-201ENST00000319562 COL24A1Q17RW2 1714 aa9.96□□□□□ -0.82
FARP1-201ENST00000319562 ARHGAP21Q5T5U3 1957 aa9.96□□□□□ -0.82
FARP1-201ENST00000319562 SPATA31B1PQ5VZV4 182 aa9.96□□□□□ -0.82
FARP1-201ENST00000319562 TSSC4Q9Y5U2 329 aaPredicted RBP9.96□□□□□ -0.82
FARP1-201ENST00000319562 SUPT4H1P63272 117 aaKnown RBP9.95□□□□□ -0.82
FARP1-201ENST00000319562 LHFPL1Q86WI0 220 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 C20orf144Q9BQM9 153 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 IL17RELQ6ZVW7 336 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 RBM3P98179 157 aaKnown RBP9.95□□□□□ -0.82
FARP1-201ENST00000319562 PAQR4Q8N4S7 273 aaPredicted RBP9.95□□□□□ -0.82
FARP1-201ENST00000319562 RPUSD1Q9UJJ7 312 aaKnown RBP9.95□□□□□ -0.82
FARP1-201ENST00000319562 PRB3Q04118 309 aaPredicted RBP9.95□□□□□ -0.82
FARP1-201ENST00000319562 GAGE1Q13065 139 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 TMEM75Q8N9X5 138 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 CYTL1Q9NRR1 136 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 TRAV13-2A0A0B4J235 113 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 NMSQ5H8A3 153 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 IGHV1-3A0A0C4DH29 117 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 EGR2P11161 476 aaPredicted RBP9.95□□□□□ -0.82
FARP1-201ENST00000319562 CDKN1AP38936 164 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 STPG4Q8N801 248 aa9.95□□□□□ -0.82
FARP1-201ENST00000319562 NDUFS6O75380 124 aaKnown RBP9.94□□□□□ -0.82
FARP1-201ENST00000319562 RHODO00212 210 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 IGHG4P01861 327 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 OR11H6Q8NGC7 330 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 IGHV1-24A0A0C4DH33 117 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 FGF6P10767 208 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 LCNL1Q6ZST4 164 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 REG4Q9BYZ8 158 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 IGHV1-8P0DP01 117 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 CSRP3P50461 194 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 VMO1Q7Z5L0 202 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 ZNF329Q86UD4 541 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 IGHV3-53P01767 116 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 RPL35AP18077 110 aaKnown RBP9.94□□□□□ -0.82
FARP1-201ENST00000319562 TMEM200BQ69YZ2 307 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 SMKR1H3BMG3 65 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 ANKRD29Q8N6D5 301 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 IGLV3-32A0A0A0MS00 114 aa9.94□□□□□ -0.82
FARP1-201ENST00000319562 K7EP13 123 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 BOD1L2Q8IYS8 172 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 I3L3M4 83 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 NDUFC2O95298 119 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 Q8TAT8 98 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 TRBV25-1A0A075B6N4 114 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 A0A087WWL8 130 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 IGHV1-18A0A0C4DH31 117 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 hADV29S1A0JD25 119 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 SRRM5B3KS81 715 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 PRO1854Q9UHT4 67 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 C5orf64Q2M2E5 130 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 TRAV25A0A0B4J276 109 aa9.93□□□□□ -0.82
FARP1-201ENST00000319562 GAGE12HA6NDE8 117 aa9.92□□□□□ -0.82
FARP1-201ENST00000319562 M0R1W7 72 aa9.92□□□□□ -0.82
FARP1-201ENST00000319562 TP53TG1Q9Y2A0 90 aa9.92□□□□□ -0.82
FARP1-201ENST00000319562 IGHV1-46P01743 117 aa9.92□□□□□ -0.82
FARP1-201ENST00000319562 DEFB104AQ8WTQ1 72 aa9.92□□□□□ -0.82
FARP1-201ENST00000319562 CACNA1HO95180 2353 aa9.92□□□□□ -0.82
FARP1-201ENST00000319562 MORN5Q5VZ52 161 aa9.92□□□□□ -0.82
FARP1-201ENST00000319562 RNF166Q96A37 237 aaPredicted RBP9.92□□□□□ -0.82
FARP1-201ENST00000319562 COL5A3P25940 1745 aaPredicted RBP9.92□□□□□ -0.82
FARP1-201ENST00000319562 IGKV1D-8A0A087WSZ0 117 aa9.92□□□□□ -0.82
FARP1-201ENST00000319562 NDPQ00604 133 aa9.92□□□□□ -0.82
FARP1-201ENST00000319562 THAP8Q8NA92 274 aa9.92□□□□□ -0.82
FARP1-201ENST00000319562 POLR3KQ9Y2Y1 108 aaPredicted RBP9.92□□□□□ -0.82
FARP1-201ENST00000319562 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.91□□□□□ -0.82
FARP1-201ENST00000319562 GAGE12JA6NER3 117 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 H0YJW9 148 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 GAGE4Q13068 117 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 GAGE5Q13069 117 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 GAGE6Q13070 117 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 K7EP34 96 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 HLA-DMBP28068 263 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 NTF4P34130 210 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 Q86TA4 180 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 A0A1W2PR77 199 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 PIP4P2Q8N4L2 257 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 A0A1W2PPM0 123 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 PRSS46E5RG02 174 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 CEND1Q8N111 149 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 USF3Q68DE3 2245 aa9.91□□□□□ -0.82
FARP1-201ENST00000319562 C11orf44Q8N8P7 122 aa9.9□□□□□ -0.82
FARP1-201ENST00000319562 CRLF1O75462 422 aa9.9□□□□□ -0.82
FARP1-201ENST00000319562 LYL1P12980 280 aa9.9□□□□□ -0.82
FARP1-201ENST00000319562 DAZ1Q9NQZ3 744 aaKnown RBP9.9□□□□□ -0.82
FARP1-201ENST00000319562 COX8AP10176 69 aa9.9□□□□□ -0.82
FARP1-201ENST00000319562 FOXF2Q12947 444 aa9.9□□□□□ -0.82
FARP1-201ENST00000319562 TMEM219Q86XT9 240 aa9.9□□□□□ -0.82
FARP1-201ENST00000319562 Q8N8P6 123 aa9.9□□□□□ -0.82
FARP1-201ENST00000319562 A0A0G2JMZ2 1700 aa9.9□□□□□ -0.82
FARP1-201ENST00000319562 LRRC37A2A6NM11 1700 aa9.9□□□□□ -0.82
FARP1-201ENST00000319562 LRRC37AA6NMS7 1700 aa9.9□□□□□ -0.82
FARP1-201ENST00000319562 TRBV6-6A0A0A6YYG2 114 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms