RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 C1orf194Q5T5A4 169 aa10.16□□□□□ -0.78
RPP40-201ENST00000319533 FXYD6-FXYD2A0A087WZ82 144 aa10.15□□□□□ -0.78
RPP40-201ENST00000319533 PMS2P5A8MQ11 134 aa10.15□□□□□ -0.78
RPP40-201ENST00000319533 FNDC10F2Z333 226 aa10.15□□□□□ -0.78
RPP40-201ENST00000319533 SPART-AS1P0CW21 52 aa10.15□□□□□ -0.78
RPP40-201ENST00000319533 ORM2P19652 201 aa10.15□□□□□ -0.78
RPP40-201ENST00000319533 Q6ZR54 194 aa10.15□□□□□ -0.78
RPP40-201ENST00000319533 OR8I2Q8N0Y5 310 aa10.15□□□□□ -0.78
RPP40-201ENST00000319533 TMEM147Q9BVK8 224 aa10.15□□□□□ -0.78
RPP40-201ENST00000319533 SLC45A2Q9UMX9 530 aa10.15□□□□□ -0.78
RPP40-201ENST00000319533 MUC4Q99102 2169 aa10.15□□□□□ -0.79
RPP40-201ENST00000319533 CAV2P51636 162 aa10.14□□□□□ -0.79
RPP40-201ENST00000319533 SELENOTP62341 195 aa10.14□□□□□ -0.79
RPP40-201ENST00000319533 GDF5OSQ5U4N7 250 aa10.14□□□□□ -0.79
RPP40-201ENST00000319533 CYP2G1PQ6ZSU1 146 aa10.14□□□□□ -0.79
RPP40-201ENST00000319533 OR1B1Q8NGR6 318 aa10.14□□□□□ -0.79
RPP40-201ENST00000319533 GGACTQ9BVM4 153 aa10.14□□□□□ -0.79
RPP40-201ENST00000319533 NPVFQ9HCQ7 196 aa10.14□□□□□ -0.79
RPP40-201ENST00000319533 HSPG2P98160 4391 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 TEX48A0A1B0GUV7 120 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 M0R2N4 97 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 CXCL2P19875 107 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 GATA2P23769 480 aaPredicted RBP10.13□□□□□ -0.79
RPP40-201ENST00000319533 ID1P41134 155 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 SAMD13Q5VXD3 122 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 TEPPQ6URK8 271 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 FOXI2Q6ZQN5 318 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 S100A7AQ86SG5 101 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 C9orf62Q8N4C0 152 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 SAV1Q9H4B6 383 aaPredicted RBP10.13□□□□□ -0.79
RPP40-201ENST00000319533 DKK2Q9UBU2 259 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 RFNGQ9Y644 331 aa10.13□□□□□ -0.79
RPP40-201ENST00000319533 RNF222A6NCQ9 220 aa10.12□□□□□ -0.79
RPP40-201ENST00000319533 SOCS3O14543 225 aa10.12□□□□□ -0.79
RPP40-201ENST00000319533 LORP23490 312 aaPredicted RBP10.12□□□□□ -0.79
RPP40-201ENST00000319533 GALR1P47211 349 aa10.12□□□□□ -0.79
RPP40-201ENST00000319533 FGL1Q08830 312 aa10.12□□□□□ -0.79
RPP40-201ENST00000319533 ZNF709Q8N972 641 aa10.12□□□□□ -0.79
RPP40-201ENST00000319533 SLC25A22Q9H936 323 aa10.12□□□□□ -0.79
RPP40-201ENST00000319533 TNFSF18Q9UNG2 199 aa10.12□□□□□ -0.79
RPP40-201ENST00000319533 ZNF98A6NK75 572 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 ARPC5O15511 151 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 HYPMO75409 117 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 LINC00869P0C866 280 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 PSMB3P49720 205 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 MEOX2P50222 304 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 DEFB1P60022 68 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 RNF212Q495C1 297 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 SPATA31B1PQ5VZV4 182 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 TMEM182Q6ZP80 229 aaPredicted RBP10.11□□□□□ -0.79
RPP40-201ENST00000319533 ZNF546Q86UE3 836 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 STX12Q86Y82 276 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 THAP6Q8TBB0 222 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 HYLS1Q96M11 299 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 LINC00052Q96N35 136 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 GPR82Q96P67 336 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 NIPSNAP3BQ9BS92 247 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 DOK5Q9P104 306 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 HIGD1AQ9Y241 93 aa10.11□□□□□ -0.79
RPP40-201ENST00000319533 IGSF23A1L1A6 192 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 HMSDA8MTL9 139 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 CST7O76096 145 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 PET100P0DJ07 73 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 EMP1P54849 157 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 SLC38A11Q08AI6 406 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 ARL16Q0P5N6 197 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 RAB31Q13636 194 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 LGALSLQ3ZCW2 172 aaPredicted RBP10.1□□□□□ -0.79
RPP40-201ENST00000319533 FAM222AQ5U5X8 452 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 SLC25A32Q9H2D1 315 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 LYRM2Q9NU23 88 aaPredicted RBP10.1□□□□□ -0.79
RPP40-201ENST00000319533 RNF24Q9Y225 148 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 LRP1BQ9NZR2 4599 aa10.1□□□□□ -0.79
RPP40-201ENST00000319533 FAM24AA6NFZ4 105 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 A8MTW9 85 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 E5RGE8 158 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 ISLRO14498 428 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 IGKV3-20P01619 116 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 OR5G3P0C626 314 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 FXYD7P58549 80 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 PLP1P60201 277 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 HBG1P69891 147 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 HBG2P69892 147 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 PXDC1Q5TGL8 231 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 C1orf158Q8N1D5 194 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 C16orf92Q96LL3 132 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 SHANK2-AS3Q9BTD1 123 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 RSG1Q9BU20 258 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 SLC25A39Q9BZJ4 359 aaPredicted RBP10.09□□□□□ -0.79
RPP40-201ENST00000319533 UQCC1Q9NVA1 299 aa10.09□□□□□ -0.79
RPP40-201ENST00000319533 H3BRN7 92 aa10.08□□□□□ -0.8
RPP40-201ENST00000319533 AGPAT2O15120 278 aa10.08□□□□□ -0.8
RPP40-201ENST00000319533 RLN2P04090 185 aa10.08□□□□□ -0.8
RPP40-201ENST00000319533 S100A11P31949 105 aa10.08□□□□□ -0.8
RPP40-201ENST00000319533 SULT1A1P50225 295 aa10.08□□□□□ -0.8
RPP40-201ENST00000319533 PSG9Q00887 426 aa10.08□□□□□ -0.8
RPP40-201ENST00000319533 UBE2DNLQ8IWF7 75 aa10.08□□□□□ -0.8
RPP40-201ENST00000319533 AQP10Q96PS8 301 aa10.08□□□□□ -0.8
RPP40-201ENST00000319533 ARL6Q9H0F7 186 aa10.08□□□□□ -0.8
RPP40-201ENST00000319533 SLC35B3Q9H1N7 401 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms