RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 ZNF767PQ75MW2 155 aa11.63□□□□□ -0.55
HDDC2-201ENST00000318787 RNF24Q9Y225 148 aa11.63□□□□□ -0.55
HDDC2-201ENST00000318787 ELOA3CA0A087WX78 387 aaPredicted RBP11.62□□□□□ -0.55
HDDC2-201ENST00000318787 TRAV8-2A0A0B4J237 113 aa11.62□□□□□ -0.55
HDDC2-201ENST00000318787 IL15RAQ13261 267 aa11.62□□□□□ -0.55
HDDC2-201ENST00000318787 ZNF709Q8N972 641 aa11.62□□□□□ -0.55
HDDC2-201ENST00000318787 TMEM208Q9BTX3 173 aa11.62□□□□□ -0.55
HDDC2-201ENST00000318787 PPP1R14DQ9NXH3 145 aa11.62□□□□□ -0.55
HDDC2-201ENST00000318787 OR5AC2Q9NZP5 309 aa11.62□□□□□ -0.55
HDDC2-201ENST00000318787 WDR83OSQ9Y284 106 aa11.62□□□□□ -0.55
HDDC2-201ENST00000318787 CNN1P51911 297 aaKnown RBP11.61□□□□□ -0.55
HDDC2-201ENST00000318787 RHOBP62745 196 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 HIST1H1AQ02539 215 aaPredicted RBP11.61□□□□□ -0.55
HDDC2-201ENST00000318787 NHLH2Q02577 135 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 SPINK13Q1W4C9 94 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 MORN5Q5VZ52 161 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 BPIFA4PQ86YQ2 179 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 TMEM37Q8WXS4 190 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 LINC00476Q8WZB0 136 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 MARVELD1Q9BSK0 173 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 NMES1Q9C002 83 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 CELA1Q9UNI1 258 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 GOLT1BQ9Y3E0 138 aa11.61□□□□□ -0.55
HDDC2-201ENST00000318787 E5RGE8 158 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 M0R2Z0 102 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 DUSP14O95147 198 aaKnown RBP11.6□□□□□ -0.55
HDDC2-201ENST00000318787 B2MP61769 119 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 CLINT1Q14677 625 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 OPCMLQ14982 345 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 Q6ZTC4 211 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 OR5C1Q8NGR4 320 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 OR1L4Q8NGR5 311 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 THAP6Q8TBB0 222 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 C2CD4CQ8TF44 421 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 SLC25A31Q9H0C2 315 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 DNAJC4Q9NNZ3 241 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 PXMP4Q9Y6I8 212 aa11.6□□□□□ -0.55
HDDC2-201ENST00000318787 A0A087X0K7 114 aa11.59□□□□□ -0.55
HDDC2-201ENST00000318787 TRAV5A0A0B4J249 113 aa11.59□□□□□ -0.55
HDDC2-201ENST00000318787 IGLL5B9A064 214 aa11.59□□□□□ -0.55
HDDC2-201ENST00000318787 CXCL3P19876 107 aa11.59□□□□□ -0.55
HDDC2-201ENST00000318787 CYCSP99999 105 aaKnown RBP11.59□□□□□ -0.55
HDDC2-201ENST00000318787 ATP6V1FQ16864 119 aa11.59□□□□□ -0.55
HDDC2-201ENST00000318787 VWC2Q2TAL6 325 aa11.59□□□□□ -0.55
HDDC2-201ENST00000318787 LCN15Q6UWW0 184 aa11.59□□□□□ -0.55
HDDC2-201ENST00000318787 PFDN5Q99471 154 aa11.59□□□□□ -0.55
HDDC2-201ENST00000318787 SLC39A9Q9NUM3 307 aa11.59□□□□□ -0.55
HDDC2-201ENST00000318787 EPPK1P58107 5090 aaKnown RBP11.58□□□□□ -0.56
HDDC2-201ENST00000318787 H2BFSP57053 126 aa11.58□□□□□ -0.56
HDDC2-201ENST00000318787 PSG3Q16557 428 aa11.58□□□□□ -0.56
HDDC2-201ENST00000318787 ZNF705AQ6ZN79 300 aaPredicted RBP11.58□□□□□ -0.56
HDDC2-201ENST00000318787 OR11H7Q8NGC8 314 aa11.58□□□□□ -0.56
HDDC2-201ENST00000318787 PPP1R1CQ8WVI7 109 aa11.58□□□□□ -0.56
HDDC2-201ENST00000318787 CLUHP3Q96NS8 147 aa11.58□□□□□ -0.56
HDDC2-201ENST00000318787 ALMS1Q8TCU4 4167 aa11.58□□□□□ -0.56
HDDC2-201ENST00000318787 MRPS12O15235 138 aaKnown RBP11.57□□□□□ -0.56
HDDC2-201ENST00000318787 HBE1P02100 147 aa11.57□□□□□ -0.56
HDDC2-201ENST00000318787 RPL29P47914 159 aaKnown RBP11.57□□□□□ -0.56
HDDC2-201ENST00000318787 BAP18Q8IXM2 172 aa11.57□□□□□ -0.56
HDDC2-201ENST00000318787 RPUSD4Q96CM3 377 aaKnown RBP11.57□□□□□ -0.56
HDDC2-201ENST00000318787 SLC50A1Q9BRV3 221 aa11.57□□□□□ -0.56
HDDC2-201ENST00000318787 HRH4Q9H3N8 390 aa11.57□□□□□ -0.56
HDDC2-201ENST00000318787 TRAV12-2A0A075B6T6 113 aa11.56□□□□□ -0.56
HDDC2-201ENST00000318787 ZNF705FA8MVS1 300 aaPredicted RBP11.56□□□□□ -0.56
HDDC2-201ENST00000318787 C11orf94C9JXX5 98 aa11.56□□□□□ -0.56
HDDC2-201ENST00000318787 H0YIZ8 118 aa11.56□□□□□ -0.56
HDDC2-201ENST00000318787 SLC17A3O00476 420 aa11.56□□□□□ -0.56
HDDC2-201ENST00000318787 INSP01308 110 aa11.56□□□□□ -0.56
HDDC2-201ENST00000318787 LCE2AQ5TA79 106 aaPredicted RBP11.56□□□□□ -0.56
HDDC2-201ENST00000318787 AMTNQ6UX39 209 aa11.56□□□□□ -0.56
HDDC2-201ENST00000318787 C1orf158Q8N1D5 194 aa11.56□□□□□ -0.56
HDDC2-201ENST00000318787 OR8A1Q8NGG7 326 aa11.56□□□□□ -0.56
HDDC2-201ENST00000318787 NPCDR1Q9BY65 106 aa11.56□□□□□ -0.56
HDDC2-201ENST00000318787 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
HDDC2-201ENST00000318787 RFNGQ9Y644 331 aa11.56□□□□□ -0.56
HDDC2-201ENST00000318787 TRAV10A0A0B4J240 114 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 LOC102723971A0A1B0GUV8 181 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 SMIM9A6NGZ8 99 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 BOLA2-SMG1P6H3BVE0 249 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 MPDU1O75352 247 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 PET100P0DJ07 73 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 CXCL2P19875 107 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 RRN3P1Q2M238 152 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 IGF2BP2-AS1Q96M15 143 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 NEU1Q99519 415 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 SMIM3Q9BZL3 60 aa11.55□□□□□ -0.56
HDDC2-201ENST00000318787 H3BQ15 152 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 AMBPP02760 352 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 SPART-AS1P0CW21 52 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 HTN1P15515 57 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 C12orf74Q32Q52 190 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 GCSAMLQ5JQS6 135 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 ALG5Q9Y673 324 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 DEFB131BA0A096LNP1 70 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 TMEM189A5PLL7 270 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 ZNF705GA8MUZ8 300 aaPredicted RBP11.54□□□□□ -0.56
HDDC2-201ENST00000318787 MPC2O95563 127 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 OR10J6PQ8NGY7 276 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 BLNKQ8WV28 456 aa11.54□□□□□ -0.56
HDDC2-201ENST00000318787 A8MTW9 85 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms