RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 LGALS7P47929 136 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 Q0VG73 95 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 FOXE3Q13461 319 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 OR1B1Q8NGR6 318 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 SLC45A2Q9UMX9 530 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 ARL2-SNX15V9GYD0 113 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 TRAV8-1A0A0A6YYK1 113 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 CBY3A6NI87 242 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 HIGD1CA8MV81 97 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 C9JCJ5 164 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 RBP4P02753 201 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 CDKN1BP46527 198 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 TMEM30BQ3MIR4 351 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 C2orf83Q53S99 150 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 LINC00322Q6ZN03 302 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-202ENST00000315962 NUP35Q8NFH5 326 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 C11orf52Q96A22 123 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 GCN1Q92616 2671 aaKnown RBP6.02□□□□□ -1.45
TRIM55-202ENST00000315962 PRRC2AP48634 2157 aaKnown RBP6.02□□□□□ -1.45
TRIM55-202ENST00000315962 NDPQ00604 133 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 BCL6BQ8N143 479 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-202ENST00000315962 NUDT10Q8NFP7 164 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 NUDT11Q96G61 164 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 SLC25A2Q9BXI2 301 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 AMMECR1Q9Y4X0 333 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-202ENST00000315962 FAM181BA6NEQ2 426 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 ESDP10768 282 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 FXYD7P58549 80 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 MPV17L2Q567V2 206 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 OR11H6Q8NGC7 330 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 C8orf46Q8TAG6 207 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 PGLYRP4Q96LB8 373 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 IGF2BP2-AS1Q96M15 143 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 NAA38Q9BRA0 125 aaKnown RBP6.01□□□□□ -1.45
TRIM55-202ENST00000315962 TRAV40A0A0B4J280 105 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 MUC21A0A0G2JKD1 596 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 MUC21A0A140T8X8 626 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 TEX22C9J3V5 150 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 NBR2O15453 112 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 COX7A2P2O60397 106 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 VAMP3Q15836 100 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 LY6EQ16553 131 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 MUC21Q5SSG8 566 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 C1orf122Q6ZSJ8 110 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 CFHR4Q92496 578 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 TPPP3Q9BW30 176 aa6.01□□□□□ -1.45
TRIM55-202ENST00000315962 IGKV1D-37A0A075B6S9 117 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 TMEM8BA6NDV4 472 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 OVOL3O00110 214 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 C8orf88P0DMB2 117 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 C8orf31Q8N9H6 132 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 TMEM167BQ9NRX6 74 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 IGHV2-70DA0A0C4DH43 119 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 SMIM27A0A1W2PRY6 76 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 G3V318 75 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 HLA-DQA1P01909 254 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 SLC25A5P05141 298 aaKnown RBP6□□□□□ -1.45
TRIM55-202ENST00000315962 CRYGBP07316 175 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 IGHV4-38-2P0DP08 117 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 CEACAM3P40198 252 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 SUB1P53999 127 aaKnown RBP eCLIP6□□□□□ -1.45
TRIM55-202ENST00000315962 ECSCRQ19T08 205 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 WDR73Q6P4I2 378 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 PATE2Q6UY27 113 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 LINC00305Q7Z4B0 112 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 TEX45Q8NA69 505 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 URB1-AS1Q96HZ7 61 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 FAM167A-AS1Q96KT0 104 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 SIRPDQ9H106 197 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 OSTCQ9NRP0 149 aa6□□□□□ -1.45
TRIM55-202ENST00000315962 NIPBLQ6KC79 2804 aaeCLIP6□□□□□ -1.45
TRIM55-202ENST00000315962 FLNAP21333 2647 aaKnown RBP5.99□□□□□ -1.45
TRIM55-202ENST00000315962 CENPVL3A0A0U1RRI6 287 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 IZUMO1RA6ND01 250 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 LYZP61626 148 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 RPL19P84098 196 aaKnown RBP5.99□□□□□ -1.45
TRIM55-202ENST00000315962 PAX2Q02962 417 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 OR10J3Q5JRS4 329 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 PAXXQ9BUH6 204 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 ITPR3Q14573 2671 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 IGHV3OR16-13A0A075B7E8 117 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 IGHV3-74A0A0B4J1X5 117 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 OR2T8A6NH00 312 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 ODF3BA8MYP8 253 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 M0R1W7 72 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 PEX7O00628 323 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 AVPP01185 164 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 UBE2G1P62253 170 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 TMEM249Q2WGJ8 235 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 TMEM116Q8NCL8 245 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 OR4C5Q8NGB2 326 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 TXNDC17Q9BRA2 123 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 C7orf69Q9H7B7 122 aa5.99□□□□□ -1.45
TRIM55-202ENST00000315962 A0A087X0K7 114 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 PGPA6NDG6 321 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 OR4C46A6NHA9 309 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 OR2J3O76001 311 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 NUDT3O95989 172 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 MT-ND6P03923 174 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 PSG1P11464 419 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms