RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 IGLV2-8P01709 118 aa9.77□□□□□ -0.85
RNF4-201ENST00000314289 APCSP02743 223 aa9.77□□□□□ -0.85
RNF4-201ENST00000314289 AMY1AP04745 511 aa9.77□□□□□ -0.85
RNF4-201ENST00000314289 IL4P05112 153 aa9.77□□□□□ -0.85
RNF4-201ENST00000314289 ZNF562Q6V9R5 426 aa9.77□□□□□ -0.85
RNF4-201ENST00000314289 Q71RC1 249 aaPredicted RBP9.77□□□□□ -0.85
RNF4-201ENST00000314289 RNASE8Q8TDE3 154 aaKnown RBP9.77□□□□□ -0.85
RNF4-201ENST00000314289 TMUB1Q9BVT8 246 aa9.77□□□□□ -0.85
RNF4-201ENST00000314289 HIGD1AQ9Y241 93 aa9.77□□□□□ -0.85
RNF4-201ENST00000314289 IGHV7-81A0A0B4J1V7 117 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 CENPVL3A0A0U1RRI6 287 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 UBE2E1P51965 193 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 SLAQ13239 276 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 Q56UQ5 140 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 ERASQ7Z444 233 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 EXOC3-AS1Q8N2X6 119 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 SLC25A39Q9BZJ4 359 aaPredicted RBP9.76□□□□□ -0.85
RNF4-201ENST00000314289 IGHV4-30-2A0A087WSY4 118 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 OR2T8A6NH00 312 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 GNG7O60262 68 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 Q8N9W7 124 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 LY96Q9Y6Y9 160 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 DOPEY2Q9Y3R5 2298 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 TRAV8-1A0A0A6YYK1 113 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 G3V318 75 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 PEX7O00628 323 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 FAM106CPP0CH98 169 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 GP9P14770 177 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 Q8N6K4 173 aa9.76□□□□□ -0.85
RNF4-201ENST00000314289 ZNF331Q9NQX6 463 aaPredicted RBP9.76□□□□□ -0.85
RNF4-201ENST00000314289 NBPF19A0A087WUL8 3843 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 TRAV40A0A0B4J280 105 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 HLA-DQA1P01909 254 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 EGR2P11161 476 aaPredicted RBP9.75□□□□□ -0.85
RNF4-201ENST00000314289 MINOS1Q5TGZ0 78 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 KLHDC1Q8N7A1 406 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 IGF2BP2-AS1Q96M15 143 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 TP73-AS1Q9UF72 201 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 MINOS1-NBL1R4GNA1 71 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 NPFFO15130 113 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 HSBP1O75506 76 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 TSPOP30536 169 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 FCGR2BP31994 310 aaPredicted RBP9.75□□□□□ -0.85
RNF4-201ENST00000314289 OSTCQ9NRP0 149 aa9.75□□□□□ -0.85
RNF4-201ENST00000314289 UBR5O95071 2799 aaPredicted RBP9.75□□□□□ -0.85
RNF4-201ENST00000314289 TMEM8BA6NDV4 472 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 RNASEKQ6P5S7 137 aaKnown RBP9.74□□□□□ -0.85
RNF4-201ENST00000314289 Q9H3A6 140 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 IGLV11-55A0A075B6I3 123 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 ATP6V0E1O15342 81 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 MAPK1IP1LQ8NDC0 245 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 C18orf32Q8TCD1 76 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 SSBP4Q9BWG4 385 aaPredicted RBP9.74□□□□□ -0.85
RNF4-201ENST00000314289 CHD6Q8TD26 2715 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 M0R2Z0 102 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 ZNF491Q8N8L2 437 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 PIMREGQ9BSJ6 248 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 EPDR1Q9UM22 224 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 ARL2-SNX15V9GYD0 113 aa9.74□□□□□ -0.85
RNF4-201ENST00000314289 F8W735 103 aaPredicted RBP9.73□□□□□ -0.85
RNF4-201ENST00000314289 IGHV4-38-2P0DP08 117 aa9.73□□□□□ -0.85
RNF4-201ENST00000314289 CAMPP49913 170 aa9.73□□□□□ -0.85
RNF4-201ENST00000314289 RNF125Q96EQ8 232 aa9.73□□□□□ -0.85
RNF4-201ENST00000314289 CCDC168Q8NDH2 2452 aa9.73□□□□□ -0.85
RNF4-201ENST00000314289 COL8A1P27658 744 aa9.73□□□□□ -0.85
RNF4-201ENST00000314289 UBE2G1P62253 170 aa9.73□□□□□ -0.85
RNF4-201ENST00000314289 LY6EQ16553 131 aa9.73□□□□□ -0.85
RNF4-201ENST00000314289 RNF151Q2KHN1 245 aa9.73□□□□□ -0.85
RNF4-201ENST00000314289 MYCNOSP40205 109 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 CLEC2AQ6UVW9 174 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 ORAOV1Q8WV07 137 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 CHRDL1Q9BU40 450 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 C21orf62Q9NYP8 219 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 MXRA5Q9NR99 2828 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 SMIM27A0A1W2PRY6 76 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 IZUMO1RA6ND01 250 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 EBI3Q14213 229 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 ZNF738Q8NE65 137 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 C10orf105Q8TEF2 133 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 MRPL27Q9P0M9 148 aaKnown RBP9.72□□□□□ -0.85
RNF4-201ENST00000314289 TEX15Q9BXT5 2789 aa9.72□□□□□ -0.85
RNF4-201ENST00000314289 MFAP4P55083 255 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 PMCHL1Q16048 86 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 EBLN2Q6P2I7 272 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 TTC9CQ8N5M4 171 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 STXBP6Q8NFX7 210 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 CLEC5AQ9NY25 188 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 COX11Q9Y6N1 276 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 IGHV3OR16-13A0A075B7E8 117 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 IGHV3-74A0A0B4J1X5 117 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 FAM181BA6NEQ2 426 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 NPIPB5A8MRT5 1133 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 OOSP1A8MZH6 123 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 PLP1P60201 277 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 COX19Q49B96 90 aa9.71□□□□□ -0.85
RNF4-201ENST00000314289 LINC00322Q6ZN03 302 aaPredicted RBP9.71□□□□□ -0.85
RNF4-201ENST00000314289 SRSF8Q9BRL6 282 aaKnown RBP9.71□□□□□ -0.85
RNF4-201ENST00000314289 CREBBPQ92793 2442 aa9.71□□□□□ -0.86
RNF4-201ENST00000314289 M0R3E3 92 aa9.71□□□□□ -0.86
RNF4-201ENST00000314289 IGLL1P15814 213 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms