RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CRLF1O75462 422 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 NDUFB4O95168 129 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 HIST1H1EP10412 219 aaKnown RBP5.32□□□□□ -1.56
PTCD2-201ENST00000308077 SUMO1P63165 101 aaKnown RBP5.32□□□□□ -1.56
PTCD2-201ENST00000308077 TMEM190Q8WZ59 177 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 C11orf52Q96A22 123 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 ELOVL1Q9BW60 279 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 TRBV19A0A075B6N1 114 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 IGHV4OR15-8A0A075B7B6 117 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 A0A087WW49 117 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 C7orf77A4D0Y5 90 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 SLC17A3O00476 420 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 EDN2P20800 178 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 RANP62826 216 aaKnown RBP5.32□□□□□ -1.56
PTCD2-201ENST00000308077 ZNF674Q2M3X9 581 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 S100A7AQ86SG5 101 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 OR4F17Q8NGA8 305 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 JMJD8Q96S16 334 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 METTL26Q96S19 204 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 Q9H3A6 140 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 ZNF727A8MUV8 499 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 NDUFA7O95182 113 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 SNAPINO95295 136 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 GNG5P63218 68 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 DEFB136Q30KP8 78 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 GPHB5Q86YW7 130 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 OR8I2Q8N0Y5 310 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 C2CD4CQ8TF44 421 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 SMIM7Q9BQ49 75 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 TRBV20OR9-2A0A075B6H5 130 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 ZNF320A2RRD8 509 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 PGPA6NDG6 321 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 M0R036 132 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 TSPAN4O14817 238 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 TCF21O43680 179 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 CD28P10747 220 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 RPL7P18124 248 aaKnown RBP5.31□□□□□ -1.56
PTCD2-201ENST00000308077 CDX1P47902 265 aaPredicted RBP5.31□□□□□ -1.56
PTCD2-201ENST00000308077 RPEL1Q2QD12 228 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 TM4SF20Q53R12 229 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 SIGLEC15Q6ZMC9 328 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 EXOC3-AS1Q8N2X6 119 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 C11orf44Q8N8P7 122 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 C4orf3Q8WVX3 66 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 NIPSNAP3BQ9BS92 247 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 SDF2L1Q9HCN8 221 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 RPS10P5Q9NQ39 176 aa5.31□□□□□ -1.56
PTCD2-201ENST00000308077 SLC25A5P05141 298 aaKnown RBP5.3□□□□□ -1.56
PTCD2-201ENST00000308077 PRB4P10163 310 aaPredicted RBP5.3□□□□□ -1.56
PTCD2-201ENST00000308077 HOXD3P31249 432 aaPredicted RBP5.3□□□□□ -1.56
PTCD2-201ENST00000308077 KHDC1LQ5JSQ8 128 aa5.3□□□□□ -1.56
PTCD2-201ENST00000308077 C1orf194Q5T5A4 169 aa5.3□□□□□ -1.56
PTCD2-201ENST00000308077 C16orf54Q6UWD8 224 aa5.3□□□□□ -1.56
PTCD2-201ENST00000308077 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.3□□□□□ -1.56
PTCD2-201ENST00000308077 GLMPQ8WWB7 406 aa5.3□□□□□ -1.56
PTCD2-201ENST00000308077 ISOC2Q96AB3 205 aa5.3□□□□□ -1.56
PTCD2-201ENST00000308077 TVP23CQ96ET8 276 aa5.3□□□□□ -1.56
PTCD2-201ENST00000308077 LINC00479Q96M42 142 aa5.3□□□□□ -1.56
PTCD2-201ENST00000308077 OTORQ9NRC9 128 aa5.3□□□□□ -1.56
PTCD2-201ENST00000308077 A0A087X0K7 114 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 IGHV7-4-1A0A0J9YVY3 117 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 PGPEP1LA6NFU8 196 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 COLCA2A8K830 154 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 PEX7O00628 323 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 S100A7P31151 101 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 RPL35P42766 123 aaKnown RBP5.29□□□□□ -1.56
PTCD2-201ENST00000308077 SLURP1P55000 103 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 PROK1P58294 105 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 PDE6HQ13956 83 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 FAM106AQ4KMX7 169 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 KLHL30-AS1Q8NEE0 82 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 DUX3Q96PT4 197 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 DAZ1Q9NQZ3 744 aaKnown RBP5.29□□□□□ -1.56
PTCD2-201ENST00000308077 NAT8Q9UHE5 227 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 EPDR1Q9UM22 224 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 RPH3ALQ9UNE2 315 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 RNF24Q9Y225 148 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 RNF114Q9Y508 228 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 TMEM213A2RRL7 107 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 K7EMT4 169 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 SYNJ2BPP57105 145 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 RPL23P62829 140 aaKnown RBP5.29□□□□□ -1.56
PTCD2-201ENST00000308077 TMEM241Q24JQ0 296 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 IGFL4Q6B9Z1 124 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 C8orf86Q6ZUL3 223 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 REC114Q7Z4M0 266 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 LYPD1Q8N2G4 141 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 C5orf17Q8NAS9 161 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 OR11H1Q8NG94 326 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 ANAPC16Q96DE5 110 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 IGF2BP2-AS1Q96M15 143 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 YPEL4Q96NS1 127 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 GPR82Q96P67 336 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 AURKAIP1Q9NWT8 199 aaPredicted RBP5.29□□□□□ -1.56
PTCD2-201ENST00000308077 SELENOKQ9Y6D0 94 aa5.29□□□□□ -1.56
PTCD2-201ENST00000308077 TRAV34A0A0B4J273 112 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 A8MWP6 167 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 LINC01619G3V211 115 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 M0R3E3 92 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 LGALS9O00182 355 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms