RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 Q6ZWC4 215 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 MIR17HGQ75NE6 70 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 RNF182Q8N6D2 247 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 OR4B1Q8NGF8 309 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 PSMG3Q9BT73 122 aaPredicted RBP8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 SLC25A2Q9BXI2 301 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 CLEC5AQ9NY25 188 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TMEM14CQ9P0S9 112 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TP53TG1Q9Y2A0 90 aa8.1□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 HMSDA8MTL9 139 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 H3BMM0 161 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 SPRY2O43597 315 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 JTBO76095 146 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 IGKV3-20P01619 116 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 MBP02144 154 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 SNRPCP09234 159 aaKnown RBP8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 IGLC2P0DOY2 106 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 PYYP10082 97 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 ATP6V0CP27449 155 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 RPL7L1Q6DKI1 246 aaKnown RBP8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 OR2G3Q8NGZ4 309 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 GNPNAT1Q96EK6 184 aaPredicted RBP8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 C20orf173Q96LM9 149 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 ARPC5LQ9BPX5 153 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 PAXXQ9BUH6 204 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 C1QTNF4Q9BXJ3 329 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 OR51M1Q9H341 326 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 AAMDCQ9H7C9 122 aa8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 ZNF331Q9NQX6 463 aaPredicted RBP8.09□□□□□ -1.11
CSPG4P1Y-201ENST00000306641 TRAV8-2A0A0B4J237 113 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 A0A0D9SG52 128 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 A0A0J9YX75 114 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 KANTRA0A1W2PQU2 76 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 H3BTX0 84 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 ZNF253O75346 499 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 DUSP14O95147 198 aaKnown RBP8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 HIST1H1EP10412 219 aaKnown RBP8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 RAB2AP61019 212 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 UBE2L3P68036 154 aaKnown RBP8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 SERF2P84101 59 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 PSG9Q00887 426 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 PDE6HQ13956 83 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 PSG3Q16557 428 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 GDF5OSQ5U4N7 250 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 IGFL4Q6B9Z1 124 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 FAM122CQ6P4D5 195 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 AKAP14Q86UN6 197 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 OR10G4Q8NGN3 311 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 OR10G9Q8NGN4 311 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 OR10G7Q8NGN6 311 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 BLNKQ8WV28 456 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 C17orf77Q96MU5 243 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 WWC2-AS2Q96NR7 200 aa8.08□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 TRBV19A0A075B6N1 114 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 F6UB75 175 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 H3BQ15 152 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 SLC17A3O00476 420 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 PFDN1O60925 122 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 OR10J4P0C629 311 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 C4BPBP20851 252 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 HLA-DMBP28068 263 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 CDC34P49427 236 aaPredicted RBP8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 DEFB1P60022 68 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 HIST1H1AQ02539 215 aaPredicted RBP8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 TCTE3Q8IZS6 198 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 KCNRGQ8N5I3 272 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 RNF183Q96D59 192 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 ST6GAL2Q96JF0 529 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 OVOL2Q9BRP0 275 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 SH3BGRL3Q9H299 93 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 PPP1R14DQ9NXH3 145 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 ZNF586Q9NXT0 402 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 RFNGQ9Y644 331 aa8.07□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 NBEAP1P0C6P0 100 aa8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 EIF5AP63241 154 aaKnown RBP8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 AKR1C8PQ5T2L2 129 aa8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 PQLC2Q6ZP29 291 aa8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 OR11H4Q8NGC9 324 aa8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 RNF141Q8WVD5 230 aa8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 RPUSD4Q96CM3 377 aaKnown RBP8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 MRPL53Q96EL3 112 aaKnown RBP8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 SAT2Q96F10 170 aaPredicted RBP8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 FAM167A-AS1Q96KT0 104 aa8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 CLUHP3Q96NS8 147 aa8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 ZNF471Q9BX82 626 aaPredicted RBP8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 PRELID1Q9Y255 219 aa8.06□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 BCL2L11O43521 198 aa8.05□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 CNN1P51911 297 aaKnown RBP8.05□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 FXYD7P58549 80 aa8.05□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 OR8A1Q8NGG7 326 aa8.05□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 RARRES2Q99969 163 aa8.05□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 ACTR3CQ9C0K3 210 aaPredicted RBP8.05□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 XCL2Q9UBD3 114 aa8.05□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 HMGB3O15347 200 aaKnown RBP8.04□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 C1QBP02746 253 aa8.04□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 AMBPP02760 352 aa8.04□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 ZNF705DP0CH99 300 aaPredicted RBP8.04□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 ZNF705BP0CI00 300 aaPredicted RBP8.04□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 IQCF2Q8IXL9 164 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms