RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 MOB3BQ86TA1 216 aa8.78□□□□□ -1
LSM3-201ENST00000306024 GPR82Q96P67 336 aa8.78□□□□□ -1
LSM3-201ENST00000306024 ONECUT1Q9UBC0 465 aa8.78□□□□□ -1
LSM3-201ENST00000306024 TMEM178BH3BS89 294 aa8.78□□□□□ -1
LSM3-201ENST00000306024 K7ERJ3 54 aa8.78□□□□□ -1
LSM3-201ENST00000306024 ARL3P36405 182 aa8.78□□□□□ -1
LSM3-201ENST00000306024 NEGR1Q7Z3B1 354 aa8.78□□□□□ -1
LSM3-201ENST00000306024 CD177Q8N6Q3 437 aa8.78□□□□□ -1
LSM3-201ENST00000306024 IGSF10Q6WRI0 2623 aa8.78□□□□□ -1
LSM3-201ENST00000306024 CFAP47Q6ZTR5 3102 aa8.77□□□□□ -1
LSM3-201ENST00000306024 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.77□□□□□ -1
LSM3-201ENST00000306024 SCGB2A1O75556 95 aa8.77□□□□□ -1
LSM3-201ENST00000306024 WFDC2Q14508 124 aa8.77□□□□□ -1
LSM3-201ENST00000306024 SLC35E4Q6ICL7 350 aa8.77□□□□□ -1
LSM3-201ENST00000306024 C11orf53Q8IXP5 236 aa8.77□□□□□ -1
LSM3-201ENST00000306024 OR13A1Q8NGR1 328 aa8.77□□□□□ -1
LSM3-201ENST00000306024 MRPL32Q9BYC8 188 aaKnown RBP8.77□□□□□ -1
LSM3-201ENST00000306024 MRPL16Q9NX20 251 aaKnown RBP8.77□□□□□ -1
LSM3-201ENST00000306024 USP9YO00507 2555 aaPredicted RBP8.77□□□□□ -1.01
LSM3-201ENST00000306024 ARFGEF3Q5TH69 2177 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 LOC107984156A0A0G2JMH3 177 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 CLEC3BP05452 202 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 VDAC2P45880 294 aaPredicted RBP8.77□□□□□ -1.01
LSM3-201ENST00000306024 ERVK11-1P61568 191 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 ARL17AQ8IVW1 177 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 OR10X1Q8NGY0 326 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 HIST1H4GQ99525 98 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 CREBBPQ92793 2442 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 USP9XQ93008 2570 aaPredicted RBP8.77□□□□□ -1.01
LSM3-201ENST00000306024 IGKV1D-17A0A075B6S4 117 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 A0A1B0GUT8 65 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 KIR2DS2P43631 304 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 GATA4P43694 442 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 UFSP1Q6NVU6 142 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 LEAP2Q969E1 77 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 PRNDQ9UKY0 176 aa8.77□□□□□ -1.01
LSM3-201ENST00000306024 H3BMG7 143 aa8.76□□□□□ -1.01
LSM3-201ENST00000306024 DUTP33316 252 aaKnown RBP8.76□□□□□ -1.01
LSM3-201ENST00000306024 ATP5G2Q06055 141 aa8.76□□□□□ -1.01
LSM3-201ENST00000306024 SLC25A33Q9BSK2 321 aa8.76□□□□□ -1.01
LSM3-201ENST00000306024 CALYQ9NYX4 217 aa8.76□□□□□ -1.01
LSM3-201ENST00000306024 ASPMQ8IZT6 3477 aa8.76□□□□□ -1.01
LSM3-201ENST00000306024 H3BVH4 76 aa8.76□□□□□ -1.01
LSM3-201ENST00000306024 MYOD1P15172 320 aa8.76□□□□□ -1.01
LSM3-201ENST00000306024 COX7A1P24310 79 aa8.76□□□□□ -1.01
LSM3-201ENST00000306024 AMTNQ6UX39 209 aa8.76□□□□□ -1.01
LSM3-201ENST00000306024 SUB1P53999 127 aaKnown RBP eCLIP8.75□□□□□ -1.013e-9■■□□□ 11.4
LSM3-201ENST00000306024 DAZAP2Q15038 168 aaPredicted RBP8.75□□□□□ -1.01
LSM3-201ENST00000306024 LINC01545Q5VT33 79 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 SFTA2Q6UW10 78 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 MBNL3Q9NUK0 354 aaKnown RBP8.75□□□□□ -1.01
LSM3-201ENST00000306024 FAM231DQ6ZW35 169 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 PCP2Q8IVA1 136 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 ZNF418Q8TF45 676 aaPredicted RBP8.75□□□□□ -1.01
LSM3-201ENST00000306024 ZNF714Q96N38 554 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 EPDR1Q9UM22 224 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 MLANAQ16655 118 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 CCDC144NLQ6NUI1 221 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 C2orf91Q6ZV80 131 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 IFI27L1Q96BM0 104 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 C1RLQ9NZP8 487 aa8.75□□□□□ -1.01
LSM3-201ENST00000306024 A0A1W2PRD5 423 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 A0A1W2PRF3 423 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 A0A1W2PRM7 423 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 NDUFS7O75251 213 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 CFHR2P36980 270 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 SYT8Q8NBV8 401 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 ZNF747Q9BV97 191 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 DYSFO75923 2080 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 ZZEF1O43149 2961 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 C15orf61A6NNL5 157 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 F8W1H4 67 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 ENSAO43768 121 aaKnown RBP8.74□□□□□ -1.01
LSM3-201ENST00000306024 EFNA4P52798 201 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 NPIPB3Q92617 1050 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 PRELID3AQ96N28 172 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 POLQO75417 2590 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 ABCA12Q86UK0 2595 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 IGLV2-8P01709 118 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 PPIFP30405 207 aaKnown RBP8.74□□□□□ -1.01
LSM3-201ENST00000306024 LINC00305Q7Z4B0 112 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 TTC9CQ8N5M4 171 aa8.74□□□□□ -1.01
LSM3-201ENST00000306024 CRXO43186 299 aaPredicted RBP8.73□□□□□ -1.01
LSM3-201ENST00000306024 MOSP00540 346 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 CKS2P33552 79 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 Q8N7P7 452 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 Q8TCH9 128 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 COQ2Q96H96 371 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 IGF2BP2-AS1Q96M15 143 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 SCGB1C2P0DMR2 95 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 PRR20EP86478 221 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 PRR20CP86479 221 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 PRR20DP86480 221 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 PRR20BP86481 221 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 PRR20AP86496 221 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 LYPD2Q6UXB3 125 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 CHAC1Q9BUX1 264 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 IFI27L2Q9H2X8 130 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 HBDP02042 147 aa8.73□□□□□ -1.01
LSM3-201ENST00000306024 CCL3L1P16619 93 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms