RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 NMES1Q9C002 83 aa19.04■□□□□ 0.64
CDKN2A-201ENST00000304494 UBE2L5PA0A1B0GUS4 154 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 MRPS12O15235 138 aaKnown RBP19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 AMBPP02760 352 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 PRR20EP86478 221 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 PRR20CP86479 221 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 PRR20DP86480 221 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 PRR20BP86481 221 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 PRR20AP86496 221 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 BAXQ07812 192 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 Q6ZTC4 211 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 OR1L4Q8NGR5 311 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 MARVELD1Q9BSK0 173 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 DNAJC4Q9NNZ3 241 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 RFNGQ9Y644 331 aa19.03■□□□□ 0.64
CDKN2A-201ENST00000304494 TRAV10A0A0B4J240 114 aa19.02■□□□□ 0.64
CDKN2A-201ENST00000304494 CXCL3P19876 107 aa19.02■□□□□ 0.64
CDKN2A-201ENST00000304494 CYCSP99999 105 aaKnown RBP19.02■□□□□ 0.64
CDKN2A-201ENST00000304494 LCN15Q6UWW0 184 aa19.02■□□□□ 0.64
CDKN2A-201ENST00000304494 AMTNQ6UX39 209 aa19.02■□□□□ 0.64
CDKN2A-201ENST00000304494 CELA1Q9UNI1 258 aa19.02■□□□□ 0.64
CDKN2A-201ENST00000304494 SIX6O95475 246 aa19.01■□□□□ 0.63
CDKN2A-201ENST00000304494 RPL29P47914 159 aaKnown RBP19.01■□□□□ 0.63
CDKN2A-201ENST00000304494 PSG3Q16557 428 aa19.01■□□□□ 0.63
CDKN2A-201ENST00000304494 MIC13Q5XKP0 118 aa19.01■□□□□ 0.63
CDKN2A-201ENST00000304494 LGALS9CQ6DKI2 356 aa19.01■□□□□ 0.63
CDKN2A-201ENST00000304494 PFDN5Q99471 154 aa19.01■□□□□ 0.63
CDKN2A-201ENST00000304494 IGLL5B9A064 214 aa19■□□□□ 0.63
CDKN2A-201ENST00000304494 E5RGE8 158 aa19■□□□□ 0.63
CDKN2A-201ENST00000304494 OR11H7Q8NGC8 314 aa19■□□□□ 0.63
CDKN2A-201ENST00000304494 CHAC2Q8WUX2 184 aa19■□□□□ 0.63
CDKN2A-201ENST00000304494 IGF2BP2-AS1Q96M15 143 aa19■□□□□ 0.63
CDKN2A-201ENST00000304494 SLC50A1Q9BRV3 221 aa19■□□□□ 0.63
CDKN2A-201ENST00000304494 SLC25A31Q9H0C2 315 aa19■□□□□ 0.63
CDKN2A-201ENST00000304494 MPDU1O75352 247 aa18.99■□□□□ 0.63
CDKN2A-201ENST00000304494 HBE1P02100 147 aa18.99■□□□□ 0.63
CDKN2A-201ENST00000304494 SPART-AS1P0CW21 52 aa18.99■□□□□ 0.63
CDKN2A-201ENST00000304494 B2MP61769 119 aa18.99■□□□□ 0.63
CDKN2A-201ENST00000304494 OPCMLQ14982 345 aa18.99■□□□□ 0.63
CDKN2A-201ENST00000304494 C1orf158Q8N1D5 194 aa18.99■□□□□ 0.63
CDKN2A-201ENST00000304494 SLC39A9Q9NUM3 307 aa18.99■□□□□ 0.63
CDKN2A-201ENST00000304494 TEX48A0A1B0GUV7 120 aa18.98■□□□□ 0.63
CDKN2A-201ENST00000304494 FGF7P21781 194 aa18.98■□□□□ 0.63
CDKN2A-201ENST00000304494 EMP1P54849 157 aa18.98■□□□□ 0.63
CDKN2A-201ENST00000304494 C12orf74Q32Q52 190 aa18.98■□□□□ 0.63
CDKN2A-201ENST00000304494 LRRC37A5PQ49AS3 106 aa18.98■□□□□ 0.63
CDKN2A-201ENST00000304494 MORN5Q5VZ52 161 aa18.98■□□□□ 0.63
CDKN2A-201ENST00000304494 OR8A1Q8NGG7 326 aa18.98■□□□□ 0.63
CDKN2A-201ENST00000304494 TMEM208Q9BTX3 173 aa18.98■□□□□ 0.63
CDKN2A-201ENST00000304494 ZNF331Q9NQX6 463 aaPredicted RBP18.98■□□□□ 0.63
CDKN2A-201ENST00000304494 INSP01308 110 aa18.97■□□□□ 0.63
CDKN2A-201ENST00000304494 HIST1H1AQ02539 215 aaPredicted RBP18.97■□□□□ 0.63
CDKN2A-201ENST00000304494 SPINK13Q1W4C9 94 aa18.97■□□□□ 0.63
CDKN2A-201ENST00000304494 PPP1R14DQ9NXH3 145 aa18.97■□□□□ 0.63
CDKN2A-201ENST00000304494 M0R2Z0 102 aa18.96■□□□□ 0.63
CDKN2A-201ENST00000304494 GUK1Q16774 197 aa18.96■□□□□ 0.63
CDKN2A-201ENST00000304494 RRN3P1Q2M238 152 aa18.96■□□□□ 0.63
CDKN2A-201ENST00000304494 RPUSD4Q96CM3 377 aaKnown RBP18.96■□□□□ 0.63
CDKN2A-201ENST00000304494 PXMP4Q9Y6I8 212 aa18.96■□□□□ 0.63
CDKN2A-201ENST00000304494 DEFB131BA0A096LNP1 70 aa18.95■□□□□ 0.62
CDKN2A-201ENST00000304494 BOLA2-SMG1P6H3BVE0 249 aa18.95■□□□□ 0.62
CDKN2A-201ENST00000304494 SSNA1O43805 119 aa18.95■□□□□ 0.62
CDKN2A-201ENST00000304494 IGLC2P0DOY2 106 aa18.95■□□□□ 0.62
CDKN2A-201ENST00000304494 RHOBP62745 196 aa18.95■□□□□ 0.62
CDKN2A-201ENST00000304494 NHLH2Q02577 135 aa18.95■□□□□ 0.62
CDKN2A-201ENST00000304494 ZNF767PQ75MW2 155 aa18.95■□□□□ 0.62
CDKN2A-201ENST00000304494 OR5C1Q8NGR4 320 aa18.95■□□□□ 0.62
CDKN2A-201ENST00000304494 OR5AC2Q9NZP5 309 aa18.95■□□□□ 0.62
CDKN2A-201ENST00000304494 EPPK1P58107 5090 aaKnown RBP18.95■□□□□ 0.62
CDKN2A-201ENST00000304494 LOC102723971A0A1B0GUV8 181 aa18.94■□□□□ 0.62
CDKN2A-201ENST00000304494 SNRPCP09234 159 aaKnown RBP18.94■□□□□ 0.62
CDKN2A-201ENST00000304494 H2BFSP57053 126 aa18.94■□□□□ 0.62
CDKN2A-201ENST00000304494 NPCDR1Q9BY65 106 aa18.94■□□□□ 0.62
CDKN2A-201ENST00000304494 APLNQ9ULZ1 77 aa18.94■□□□□ 0.62
CDKN2A-201ENST00000304494 CRXO43186 299 aaPredicted RBP18.93■□□□□ 0.62
CDKN2A-201ENST00000304494 RNF126Q9BV68 326 aa18.93■□□□□ 0.62
CDKN2A-201ENST00000304494 DKK2Q9UBU2 259 aa18.93■□□□□ 0.62
CDKN2A-201ENST00000304494 IGHV4-4A0A075B6R2 117 aa18.92■□□□□ 0.62
CDKN2A-201ENST00000304494 TRAV5A0A0B4J249 113 aa18.92■□□□□ 0.62
CDKN2A-201ENST00000304494 PET100P0DJ07 73 aa18.92■□□□□ 0.62
CDKN2A-201ENST00000304494 PPP1R1CQ8WVI7 109 aa18.92■□□□□ 0.62
CDKN2A-201ENST00000304494 H0YIZ8 118 aa18.91■□□□□ 0.62
CDKN2A-201ENST00000304494 H3BQ15 152 aa18.91■□□□□ 0.62
CDKN2A-201ENST00000304494 SLC17A3O00476 420 aa18.91■□□□□ 0.62
CDKN2A-201ENST00000304494 FAM222AQ5U5X8 452 aa18.91■□□□□ 0.62
CDKN2A-201ENST00000304494 BAP18Q8IXM2 172 aa18.91■□□□□ 0.62
CDKN2A-201ENST00000304494 THAP6Q8TBB0 222 aa18.91■□□□□ 0.62
CDKN2A-201ENST00000304494 SAT2Q96F10 170 aaPredicted RBP18.91■□□□□ 0.62
CDKN2A-201ENST00000304494 NIPSNAP3BQ9BS92 247 aa18.91■□□□□ 0.62
CDKN2A-201ENST00000304494 KMT2AQ03164 3969 aa18.9■□□□□ 0.62
CDKN2A-201ENST00000304494 H3BTX0 84 aa18.9■□□□□ 0.62
CDKN2A-201ENST00000304494 OR10J6PQ8NGY7 276 aa18.9■□□□□ 0.62
CDKN2A-201ENST00000304494 KCNIP2Q9NS61 270 aa18.9■□□□□ 0.62
CDKN2A-201ENST00000304494 YTHDF2Q9Y5A9 579 aaKnown RBP18.9■□□□□ 0.62
CDKN2A-201ENST00000304494 TRAV12-2A0A075B6T6 113 aa18.89■□□□□ 0.61
CDKN2A-201ENST00000304494 ZNF253O75346 499 aa18.89■□□□□ 0.61
CDKN2A-201ENST00000304494 CLINT1Q14677 625 aa18.89■□□□□ 0.61
CDKN2A-201ENST00000304494 TMEM256Q8N2U0 113 aa18.89■□□□□ 0.61
CDKN2A-201ENST00000304494 TMEM14CQ9P0S9 112 aa18.89■□□□□ 0.61
CDKN2A-201ENST00000304494 OXA1LQ15070 435 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms