RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 DNAL4O96015 105 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 ZNF664Q8N3J9 261 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 DPH3P1Q9H4G8 78 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 A0A1B0GUS0 222 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 GGTLC3B5MD39 225 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 WT1-ASQ06250 92 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 RNF182Q8N6D2 247 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 IGHV3-73A0A0B4J1V6 119 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 LINC01559Q495D7 138 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 RHPN1-AS1Q9BWJ2 59 aa13.13□□□□□ -0.31
BRD3-201ENST00000303407 KIAA1549LQ6ZVL6 1849 aa13.12□□□□□ -0.31
BRD3-201ENST00000303407 YPEL3P61236 119 aaPredicted RBP13.12□□□□□ -0.31
BRD3-201ENST00000303407 CD300EQ496F6 205 aaPredicted RBP13.12□□□□□ -0.31
BRD3-201ENST00000303407 LINC01356Q8N9X3 169 aa13.12□□□□□ -0.31
BRD3-201ENST00000303407 Q0VG73 95 aa13.12□□□□□ -0.31
BRD3-201ENST00000303407 SNRNP200O75643 2136 aaKnown RBP13.12□□□□□ -0.31
BRD3-201ENST00000303407 DOCK8Q8NF50 2099 aa13.12□□□□□ -0.31
BRD3-201ENST00000303407 ARMS2P0C7Q2 107 aa13.12□□□□□ -0.31
BRD3-201ENST00000303407 Q6ZSR3 168 aa13.12□□□□□ -0.31
BRD3-201ENST00000303407 RCHY1Q96PM5 261 aa13.12□□□□□ -0.31
BRD3-201ENST00000303407 PI4KAP42356 2102 aa13.12□□□□□ -0.31
BRD3-201ENST00000303407 IGHV3-64A0A075B6Q5 118 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 HOXA3O43365 443 aaPredicted RBP13.11□□□□□ -0.31
BRD3-201ENST00000303407 TMEM249Q2WGJ8 235 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 IGHV2-70DA0A0C4DH43 119 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 TMEM8BA6NDV4 472 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 PCP4P48539 62 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 HTN3P15516 51 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 WT1P19544 449 aaPredicted RBP13.11□□□□□ -0.31
BRD3-201ENST00000303407 GUSBP1Q15486 140 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 TRBV19A0A075B6N1 114 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 TDGF1P13385 188 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 SFTA2Q6UW10 78 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 DNAJC13O75165 2243 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 TRAV2A0A0B4J234 112 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 SPRNQ5BIV9 151 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 C14orf178Q8N769 122 aaPredicted RBP13.11□□□□□ -0.31
BRD3-201ENST00000303407 ZNF114Q8NC26 417 aa13.11□□□□□ -0.31
BRD3-201ENST00000303407 SLC25A16P16260 332 aa13.1□□□□□ -0.31
BRD3-201ENST00000303407 SEC11AP67812 179 aa13.1□□□□□ -0.31
BRD3-201ENST00000303407 LYPD6Q86Y78 171 aa13.1□□□□□ -0.31
BRD3-201ENST00000303407 V9GYV3 84 aa13.1□□□□□ -0.31
BRD3-201ENST00000303407 TTC32Q5I0X7 151 aa13.1□□□□□ -0.31
BRD3-201ENST00000303407 IL17RELQ6ZVW7 336 aa13.1□□□□□ -0.31
BRD3-201ENST00000303407 OR9G4Q8NGQ1 327 aa13.1□□□□□ -0.31
BRD3-201ENST00000303407 TMEM158Q8WZ71 300 aa13.1□□□□□ -0.31
BRD3-201ENST00000303407 NDUFS8O00217 210 aa13.1□□□□□ -0.31
BRD3-201ENST00000303407 TRGV4A0A0C4DH28 118 aa13.09□□□□□ -0.31
BRD3-201ENST00000303407 SSBP2P81877 361 aaPredicted RBP13.09□□□□□ -0.31
BRD3-201ENST00000303407 MCRIP2Q9BUT9 160 aaKnown RBP13.09□□□□□ -0.31
BRD3-201ENST00000303407 SAP30O75446 220 aa13.09□□□□□ -0.31
BRD3-201ENST00000303407 OVOL3O00110 214 aa13.09□□□□□ -0.31
BRD3-201ENST00000303407 DAZ1Q9NQZ3 744 aaKnown RBP13.09□□□□□ -0.31
BRD3-201ENST00000303407 TMEM213A2RRL7 107 aa13.08□□□□□ -0.31
BRD3-201ENST00000303407 LINC01549A6NIU2 74 aa13.08□□□□□ -0.31
BRD3-201ENST00000303407 H3BRN7 92 aa13.08□□□□□ -0.31
BRD3-201ENST00000303407 CSTL1Q9H114 145 aa13.08□□□□□ -0.32
BRD3-201ENST00000303407 MSMBP08118 114 aa13.08□□□□□ -0.32
BRD3-201ENST00000303407 LYPD6BQ8NI32 183 aa13.08□□□□□ -0.32
BRD3-201ENST00000303407 IGHV1-69DA0A0B4J2H0 117 aa13.08□□□□□ -0.32
BRD3-201ENST00000303407 SMIM27A0A1W2PRY6 76 aa13.08□□□□□ -0.32
BRD3-201ENST00000303407 G3V318 75 aa13.08□□□□□ -0.32
BRD3-201ENST00000303407 IGHV1-69P01742 117 aa13.08□□□□□ -0.32
BRD3-201ENST00000303407 THAP8Q8NA92 274 aa13.08□□□□□ -0.32
BRD3-201ENST00000303407 PRSS33Q8NF86 280 aa13.08□□□□□ -0.32
BRD3-201ENST00000303407 POLR3KQ9Y2Y1 108 aaPredicted RBP13.08□□□□□ -0.32
BRD3-201ENST00000303407 C18orf32Q8TCD1 76 aa13.08□□□□□ -0.32
BRD3-201ENST00000303407 IGHV4-39P01824 125 aa13.07□□□□□ -0.32
BRD3-201ENST00000303407 OR2K2Q8NGT1 345 aa13.07□□□□□ -0.32
BRD3-201ENST00000303407 A0A087X0K7 114 aa13.07□□□□□ -0.32
BRD3-201ENST00000303407 K7EM74 188 aa13.07□□□□□ -0.32
BRD3-201ENST00000303407 CT83Q5H943 113 aa13.07□□□□□ -0.32
BRD3-201ENST00000303407 CFAP161Q6P656 301 aa13.07□□□□□ -0.32
BRD3-201ENST00000303407 IGFL2Q6UWQ7 119 aa13.07□□□□□ -0.32
BRD3-201ENST00000303407 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
BRD3-201ENST00000303407 FER1L5A0AVI2 2057 aa13.07□□□□□ -0.32
BRD3-201ENST00000303407 SHISA9B4DS77 424 aa13.06□□□□□ -0.32
BRD3-201ENST00000303407 PLNP26678 52 aa13.06□□□□□ -0.32
BRD3-201ENST00000303407 ZNF876PQ49A33 203 aa13.06□□□□□ -0.32
BRD3-201ENST00000303407 SAMD5Q5TGI4 173 aa13.06□□□□□ -0.32
BRD3-201ENST00000303407 OR5A1Q8NGJ0 315 aa13.06□□□□□ -0.32
BRD3-201ENST00000303407 ZNF415Q09FC8 603 aa13.06□□□□□ -0.32
BRD3-201ENST00000303407 LSM4Q9Y4Z0 139 aaKnown RBP13.06□□□□□ -0.32
BRD3-201ENST00000303407 FAM231BA6NCW3 169 aa13.06□□□□□ -0.32
BRD3-201ENST00000303407 PRSS46E5RG02 174 aa13.06□□□□□ -0.32
BRD3-201ENST00000303407 FXYD5Q96DB9 178 aa13.06□□□□□ -0.32
BRD3-201ENST00000303407 CACNA1DQ01668 2161 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 VCYO14598 125 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 TNFRSF6BO95407 300 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 POU2AF1Q16633 256 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 ASPHD1Q5U4P2 390 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 LCNL1Q6ZST4 164 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 KAAG1Q9UBP8 84 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 A0A087WWL8 130 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 TRBV7-9A0A0J9YWB2 115 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 VWC2Q2TAL6 325 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 KLHL30-AS1Q8NEE0 82 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 ADARB2-AS1A8MUL3 147 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 TSPAN13O95857 204 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms