RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 RPH3ALQ9UNE2 315 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 F8P00451 2351 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 A0A1W2PS18 150 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 ZNF785A8K8V0 405 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 HOXD3P31249 432 aaPredicted RBP9.92□□□□□ -0.82
CCDC7-202ENST00000302316 AKR1C3P42330 323 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 RPL35P42766 123 aaKnown RBP9.92□□□□□ -0.82
CCDC7-202ENST00000302316 HIST2H2BDQ6DRA6 164 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 C16orf54Q6UWD8 224 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 LYPD1Q8N2G4 141 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 HIST1H2BAQ96A08 127 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 GRAMD2BQ96HH9 432 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 SDF2L1Q9HCN8 221 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 UFC1Q9Y3C8 167 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 RNF114Q9Y508 228 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 A0A087X0K7 114 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 IGHV7-4-1A0A0J9YVY3 117 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 K7EMT4 169 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 CD28P10747 220 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 RHEBQ15382 184 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 ADIRFQ15847 76 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 CMTM2Q8TAZ6 248 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 AAMDCQ9H7C9 122 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 RPS10P5Q9NQ39 176 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 EPDR1Q9UM22 224 aa9.92□□□□□ -0.82
CCDC7-202ENST00000302316 TRBV20OR9-2A0A075B6H5 130 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 C7orf77A4D0Y5 90 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 HELTA6NFD8 242 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 CNN1P51911 297 aaKnown RBP9.91□□□□□ -0.82
CCDC7-202ENST00000302316 SYNJ2BPP57105 145 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 PSG9Q00887 426 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 GLMPQ8WWB7 406 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 LINC01619G3V211 115 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 RPL23P62829 140 aaKnown RBP9.91□□□□□ -0.82
CCDC7-202ENST00000302316 REC114Q7Z4M0 266 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 OR11H1Q8NG94 326 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 ATG101Q9BSB4 218 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 RHPN1-AS1Q9BWJ2 59 aa9.91□□□□□ -0.82
CCDC7-202ENST00000302316 PGPEP1LA6NFU8 196 aa9.9□□□□□ -0.82
CCDC7-202ENST00000302316 ZNF253O75346 499 aa9.9□□□□□ -0.82
CCDC7-202ENST00000302316 TCRAP04437 139 aa9.9□□□□□ -0.82
CCDC7-202ENST00000302316 BTN1A1Q13410 526 aa9.9□□□□□ -0.82
CCDC7-202ENST00000302316 CENPWQ5EE01 88 aa9.9□□□□□ -0.82
CCDC7-202ENST00000302316 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.9□□□□□ -0.82
CCDC7-202ENST00000302316 C8orf86Q6ZUL3 223 aa9.9□□□□□ -0.82
CCDC7-202ENST00000302316 WFDC12Q8WWY7 111 aa9.9□□□□□ -0.82
CCDC7-202ENST00000302316 DPF1Q92782 380 aa9.9□□□□□ -0.82
CCDC7-202ENST00000302316 LINC00479Q96M42 142 aa9.9□□□□□ -0.82
CCDC7-202ENST00000302316 A0A1W2PRX2 142 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 TMEM213A2RRL7 107 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 A8MWP6 167 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 C9JCJ5 164 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 EDN2P20800 178 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 GNG4P50150 75 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 SLURP1P55000 103 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 LINC01551Q86U37 167 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 C1QL4Q86Z23 238 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 OR1N2Q8NGR9 330 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 DUX3Q96PT4 197 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 CITED2Q99967 270 aaPredicted RBP9.89□□□□□ -0.83
CCDC7-202ENST00000302316 SMPXQ9UHP9 88 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 TRAV34A0A0B4J273 112 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 M0R3E3 92 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 LGALS9O00182 355 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 CHEK1O14757 476 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 BMI1P35226 326 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 MEOX2P50222 304 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 PROK1P58294 105 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 UBE2G1P62253 170 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 TMEM88Q6PEY1 159 aa9.89□□□□□ -0.83
CCDC7-202ENST00000302316 ZNF331Q9NQX6 463 aaPredicted RBP9.89□□□□□ -0.83
CCDC7-202ENST00000302316 AURKAIP1Q9NWT8 199 aaPredicted RBP9.89□□□□□ -0.83
CCDC7-202ENST00000302316 TSSC4Q9Y5U2 329 aaPredicted RBP9.89□□□□□ -0.83
CCDC7-202ENST00000302316 B4DEV8 164 aa9.88□□□□□ -0.83
CCDC7-202ENST00000302316 IGFL4Q6B9Z1 124 aa9.88□□□□□ -0.83
CCDC7-202ENST00000302316 CBLN2Q8IUK8 224 aa9.88□□□□□ -0.83
CCDC7-202ENST00000302316 SLC50A1Q9BRV3 221 aa9.88□□□□□ -0.83
CCDC7-202ENST00000302316 ISLRO14498 428 aa9.88□□□□□ -0.83
CCDC7-202ENST00000302316 CSN1S1P47710 185 aa9.88□□□□□ -0.83
CCDC7-202ENST00000302316 TAS2R60P59551 318 aa9.88□□□□□ -0.83
CCDC7-202ENST00000302316 RPL11P62913 178 aaKnown RBP9.88□□□□□ -0.83
CCDC7-202ENST00000302316 KLF5Q13887 457 aaPredicted RBP9.88□□□□□ -0.83
CCDC7-202ENST00000302316 GOLT1AQ6ZVE7 132 aa9.88□□□□□ -0.83
CCDC7-202ENST00000302316 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.88□□□□□ -0.83
CCDC7-202ENST00000302316 IGF2BP2-AS1Q96M15 143 aa9.88□□□□□ -0.83
CCDC7-202ENST00000302316 TMEM183BQ1AE95 376 aa9.87□□□□□ -0.83
CCDC7-202ENST00000302316 OCC1Q8TAD7 63 aa9.87□□□□□ -0.83
CCDC7-202ENST00000302316 SGK494Q96LW2 274 aa9.87□□□□□ -0.83
CCDC7-202ENST00000302316 DIRC3C9JPN6 131 aa9.86□□□□□ -0.83
CCDC7-202ENST00000302316 DNASE2O00115 360 aaPredicted RBP9.86□□□□□ -0.83
CCDC7-202ENST00000302316 PRB4P10163 310 aaPredicted RBP9.86□□□□□ -0.83
CCDC7-202ENST00000302316 HLA-DMBP28068 263 aa9.86□□□□□ -0.83
CCDC7-202ENST00000302316 ISOC2Q96AB3 205 aa9.86□□□□□ -0.83
CCDC7-202ENST00000302316 FMC1Q96HJ9 113 aa9.86□□□□□ -0.83
CCDC7-202ENST00000302316 KLF12Q9Y4X4 402 aa9.86□□□□□ -0.83
CCDC7-202ENST00000302316 SELENOKQ9Y6D0 94 aa9.86□□□□□ -0.83
CCDC7-202ENST00000302316 LY96Q9Y6Y9 160 aa9.86□□□□□ -0.83
CCDC7-202ENST00000302316 SETD2Q9BYW2 2564 aaPredicted RBP9.86□□□□□ -0.83
CCDC7-202ENST00000302316 A0A087WWC5 75 aa9.86□□□□□ -0.83
CCDC7-202ENST00000302316 K7EQM0 130 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms