RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 FAM90A9PA6NNJ1 464 aa10.71□□□□□ -0.7
CASC4-201ENST00000299957 FAM71F2Q6NXP2 309 aa10.71□□□□□ -0.7
CASC4-201ENST00000299957 TMEM75Q8N9X5 138 aa10.71□□□□□ -0.7
CASC4-201ENST00000299957 YPEL4Q96NS1 127 aa10.71□□□□□ -0.7
CASC4-201ENST00000299957 DKK4Q9UBT3 224 aa10.71□□□□□ -0.7
CASC4-201ENST00000299957 A1L4Q6 167 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 H3BVH4 76 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 IFI27P40305 119 aaPredicted RBP10.7□□□□□ -0.7
CASC4-201ENST00000299957 LCNL1Q6ZST4 164 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 C8orf46Q8TAG6 207 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 MAP1LC3AQ9H492 121 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 C1RLQ9NZP8 487 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 NDUFA4L2Q9NRX3 87 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 MBD3L4A6NDZ8 208 aaPredicted RBP10.7□□□□□ -0.7
CASC4-201ENST00000299957 MBD3L3A6NE82 208 aaPredicted RBP10.7□□□□□ -0.7
CASC4-201ENST00000299957 MBD3L5A6NJ08 208 aaPredicted RBP10.7□□□□□ -0.7
CASC4-201ENST00000299957 SYS1-DBNDD2H3BUS1 97 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 NDUFA3O95167 84 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 CENPVQ7Z7K6 275 aaPredicted RBP10.7□□□□□ -0.7
CASC4-201ENST00000299957 ORMDL3Q8N138 153 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 FER1L6-AS1Q8NA97 138 aa10.7□□□□□ -0.7
CASC4-201ENST00000299957 MBD3L2Q8NHZ7 208 aaPredicted RBP10.7□□□□□ -0.7
CASC4-201ENST00000299957 B9A039 149 aa10.69□□□□□ -0.7
CASC4-201ENST00000299957 HIST1H4GQ99525 98 aa10.69□□□□□ -0.7
CASC4-201ENST00000299957 MEGF9Q9H1U4 602 aa10.69□□□□□ -0.7
CASC4-201ENST00000299957 GUSBP1Q15486 140 aa10.69□□□□□ -0.7
CASC4-201ENST00000299957 NBR2O15453 112 aa10.69□□□□□ -0.7
CASC4-201ENST00000299957 BMI1P35226 326 aa10.69□□□□□ -0.7
CASC4-201ENST00000299957 Q0VG73 95 aa10.69□□□□□ -0.7
CASC4-201ENST00000299957 ZNF672Q499Z4 452 aaPredicted RBP10.69□□□□□ -0.7
CASC4-201ENST00000299957 ARPC1AQ92747 370 aa10.69□□□□□ -0.7
CASC4-201ENST00000299957 C20orf144Q9BQM9 153 aa10.69□□□□□ -0.7
CASC4-201ENST00000299957 E7EQL1 145 aa10.68□□□□□ -0.7
CASC4-201ENST00000299957 MTURNQ8N3F0 131 aa10.68□□□□□ -0.7
CASC4-201ENST00000299957 C8orf49Q96NF6 230 aa10.68□□□□□ -0.7
CASC4-201ENST00000299957 OTORQ9NRC9 128 aa10.68□□□□□ -0.7
CASC4-201ENST00000299957 LEPP41159 167 aa10.68□□□□□ -0.7
CASC4-201ENST00000299957 ATP5IP56385 69 aaPredicted RBP10.68□□□□□ -0.7
CASC4-201ENST00000299957 HIST1H1AQ02539 215 aaPredicted RBP10.68□□□□□ -0.7
CASC4-201ENST00000299957 EBLN2Q6P2I7 272 aa10.68□□□□□ -0.7
CASC4-201ENST00000299957 JKAMPQ9P055 326 aa10.68□□□□□ -0.7
CASC4-201ENST00000299957 WDFY3Q8IZQ1 3526 aa10.68□□□□□ -0.7
CASC4-201ENST00000299957 COA6Q5JTJ3 125 aaKnown RBP10.68□□□□□ -0.7
CASC4-201ENST00000299957 NHP2Q9NX24 153 aaKnown RBP10.68□□□□□ -0.7
CASC4-201ENST00000299957 IGLV3-9A0A075B6K5 115 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 FN1P02751 2386 aaKnown RBP10.67□□□□□ -0.7
CASC4-201ENST00000299957 IGLV1-44P01699 117 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 FABP2P12104 132 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 GRNP28799 593 aaKnown RBP10.67□□□□□ -0.7
CASC4-201ENST00000299957 ERCC8Q13216 396 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 CCDC144NLQ6NUI1 221 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 PHLDA3Q9Y5J5 127 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 FAM106CPP0CH98 169 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 HLA-DMBP28068 263 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 PATE2Q6UY27 113 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 GTSCR1Q86UQ5 136 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 RNF182Q8N6D2 247 aa10.67□□□□□ -0.7
CASC4-201ENST00000299957 SEM1Q6ZVN7 128 aa10.66□□□□□ -0.7
CASC4-201ENST00000299957 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
CASC4-201ENST00000299957 LOXP28300 417 aaPredicted RBP10.66□□□□□ -0.7
CASC4-201ENST00000299957 METTL26Q96S19 204 aa10.66□□□□□ -0.7
CASC4-201ENST00000299957 PDLIM4P50479 330 aa10.66□□□□□ -0.7
CASC4-201ENST00000299957 RHOGP84095 191 aa10.66□□□□□ -0.7
CASC4-201ENST00000299957 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
CASC4-201ENST00000299957 RNF114Q9Y508 228 aa10.66□□□□□ -0.7
CASC4-201ENST00000299957 PEF1Q9UBV8 284 aaKnown RBP10.65□□□□□ -0.7
CASC4-201ENST00000299957 K7EMI3 77 aa10.65□□□□□ -0.7
CASC4-201ENST00000299957 EMP1P54849 157 aa10.65□□□□□ -0.7
CASC4-201ENST00000299957 OR5AN1Q8NGI8 311 aa10.65□□□□□ -0.7
CASC4-201ENST00000299957 IFI27L1Q96BM0 104 aa10.65□□□□□ -0.7
CASC4-201ENST00000299957 SPCS1Q9Y6A9 102 aa10.65□□□□□ -0.7
CASC4-201ENST00000299957 BUB1B-PAK6H3BSN5 160 aa10.65□□□□□ -0.71
CASC4-201ENST00000299957 TEX43Q6ZNM6 134 aa10.65□□□□□ -0.71
CASC4-201ENST00000299957 JMJD8Q96S16 334 aa10.65□□□□□ -0.71
CASC4-201ENST00000299957 A0A1B0GWJ7 208 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 NDUFS7O75251 213 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 LY6DQ14210 128 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 C15orf32Q32M92 178 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 Q6ZS92 163 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 C11orf52Q96A22 123 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 IGHV1-24A0A0C4DH33 117 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 C10orf142B7Z368 130 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 J3QR89 54 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 Q86TA4 180 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 DSCAMO60469 2012 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 C22orf46C9J442 243 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 TRGV3P03979 118 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 PSMB2P49721 201 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 DLX6P56179 175 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 BRD3OSQ6XYD6 125 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 ZNF503Q96F45 646 aa10.64□□□□□ -0.71
CASC4-201ENST00000299957 APOMO95445 188 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 SAPCD1Q5SSQ6 148 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 CEP192Q8TEP8 1941 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 SPRY4Q9C004 299 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 LY96Q9Y6Y9 160 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 KIR2DL5BA0A0G2JN68 375 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 KIR2DL5BA0A0G2JPC4 375 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 KIR2DL5AQ8N109 375 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 PRSS33Q8NF86 280 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms