RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 FAM213BQ8TBF2 198 aa13.45□□□□□ -0.26
TMED3-201ENST00000299705 ZNF586Q9NXT0 402 aa13.45□□□□□ -0.26
TMED3-201ENST00000299705 TRBV19A0A075B6N1 114 aa13.44□□□□□ -0.26
TMED3-201ENST00000299705 ISLRO14498 428 aa13.44□□□□□ -0.26
TMED3-201ENST00000299705 EIF3GO75821 320 aaKnown RBP eCLIP13.44□□□□□ -0.26
TMED3-201ENST00000299705 NBEAP1P0C6P0 100 aa13.44□□□□□ -0.26
TMED3-201ENST00000299705 ID1P41134 155 aa13.44□□□□□ -0.26
TMED3-201ENST00000299705 PSMB3P49720 205 aa13.44□□□□□ -0.26
TMED3-201ENST00000299705 PDE6HQ13956 83 aa13.44□□□□□ -0.26
TMED3-201ENST00000299705 ALKAL2Q6UX46 152 aa13.44□□□□□ -0.26
TMED3-201ENST00000299705 MBD3L1Q8WWY6 194 aa13.44□□□□□ -0.26
TMED3-201ENST00000299705 SAT2Q96F10 170 aaPredicted RBP13.44□□□□□ -0.26
TMED3-201ENST00000299705 SLC50A1Q9BRV3 221 aa13.44□□□□□ -0.26
TMED3-201ENST00000299705 SORL1Q92673 2214 aa13.43□□□□□ -0.26
TMED3-201ENST00000299705 OR10J4P0C629 311 aa13.43□□□□□ -0.26
TMED3-201ENST00000299705 ARL14EPLP0DKL9 152 aa13.43□□□□□ -0.26
TMED3-201ENST00000299705 UBE2L3P68036 154 aaKnown RBP13.43□□□□□ -0.26
TMED3-201ENST00000299705 C16orf92Q96LL3 132 aa13.43□□□□□ -0.26
TMED3-201ENST00000299705 ZNF331Q9NQX6 463 aaPredicted RBP13.43□□□□□ -0.26
TMED3-201ENST00000299705 MAP1LC3B2A6NCE7 125 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 SNRPCP09234 159 aaKnown RBP13.42□□□□□ -0.26
TMED3-201ENST00000299705 CD7P09564 240 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 GCHFRP30047 84 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 CD81P60033 236 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 SNRPD3P62318 126 aaKnown RBP13.42□□□□□ -0.26
TMED3-201ENST00000299705 FAM74A1Q5RGS3 127 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 TEX261Q6UWH6 196 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 FAM24BQ8N5W8 94 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 SUN5Q8TC36 379 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 LRRC20Q8TCA0 184 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 PRR25Q96S07 402 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 MAP1LC3BQ9GZQ8 125 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 CLEC5AQ9NY25 188 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 H2AFB1P0C5Y9 115 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 Q8N1Y9 231 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 BLNKQ8WV28 456 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 TMEM167BQ9NRX6 74 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 C19orf73Q9NVV2 129 aa13.42□□□□□ -0.26
TMED3-201ENST00000299705 FBN3Q75N90 2809 aa13.41□□□□□ -0.26
TMED3-201ENST00000299705 TRAV8-2A0A0B4J237 113 aa13.41□□□□□ -0.26
TMED3-201ENST00000299705 H3BTX0 84 aa13.41□□□□□ -0.26
TMED3-201ENST00000299705 NDUFB4O95168 129 aa13.41□□□□□ -0.26
TMED3-201ENST00000299705 ZNF688P0C7X2 276 aa13.41□□□□□ -0.26
TMED3-201ENST00000299705 PSG9Q00887 426 aa13.41□□□□□ -0.26
TMED3-201ENST00000299705 ODF3L2Q3SX64 289 aa13.41□□□□□ -0.26
TMED3-201ENST00000299705 SFT2D1Q8WV19 159 aa13.41□□□□□ -0.26
TMED3-201ENST00000299705 MAP6D1Q9H9H5 199 aa13.41□□□□□ -0.26
TMED3-201ENST00000299705 TRAV1-1A0A0B4J248 108 aa13.4□□□□□ -0.26
TMED3-201ENST00000299705 OR11H12B2RN74 326 aa13.4□□□□□ -0.26
TMED3-201ENST00000299705 SLC17A3O00476 420 aa13.4□□□□□ -0.26
TMED3-201ENST00000299705 LYPD1Q8N2G4 141 aa13.4□□□□□ -0.26
TMED3-201ENST00000299705 ZNF680Q8NEM1 530 aa13.4□□□□□ -0.26
TMED3-201ENST00000299705 ZNF705EA8MWA4 302 aaPredicted RBP13.39□□□□□ -0.27
TMED3-201ENST00000299705 FGF8P55075 233 aaPredicted RBP13.39□□□□□ -0.27
TMED3-201ENST00000299705 DEFB131AP59861 70 aa13.39□□□□□ -0.27
TMED3-201ENST00000299705 PSMG4Q5JS54 123 aa13.39□□□□□ -0.27
TMED3-201ENST00000299705 UBQLN2Q9UHD9 624 aa13.39□□□□□ -0.27
TMED3-201ENST00000299705 TEX46H3BTG2 121 aa13.38□□□□□ -0.27
TMED3-201ENST00000299705 IFNA7P01567 189 aa13.38□□□□□ -0.27
TMED3-201ENST00000299705 BLOC1S1P78537 153 aa13.38□□□□□ -0.27
TMED3-201ENST00000299705 IGFL4Q6B9Z1 124 aa13.38□□□□□ -0.27
TMED3-201ENST00000299705 LINC00052Q96N35 136 aa13.38□□□□□ -0.27
TMED3-201ENST00000299705 AAMDCQ9H7C9 122 aa13.38□□□□□ -0.27
TMED3-201ENST00000299705 AURKAIP1Q9NWT8 199 aaPredicted RBP13.38□□□□□ -0.27
TMED3-201ENST00000299705 HBE1P02100 147 aa13.37□□□□□ -0.27
TMED3-201ENST00000299705 PSG3Q16557 428 aa13.37□□□□□ -0.27
TMED3-201ENST00000299705 C20orf173Q96LM9 149 aa13.37□□□□□ -0.27
TMED3-201ENST00000299705 TMPRSS5Q9H3S3 457 aa13.37□□□□□ -0.27
TMED3-201ENST00000299705 PRELID1Q9Y255 219 aa13.37□□□□□ -0.27
TMED3-201ENST00000299705 RANP62826 216 aaKnown RBP13.36□□□□□ -0.27
TMED3-201ENST00000299705 IQCF2Q8IXL9 164 aa13.36□□□□□ -0.27
TMED3-201ENST00000299705 RNF182Q8N6D2 247 aa13.36□□□□□ -0.27
TMED3-201ENST00000299705 MRPL53Q96EL3 112 aaKnown RBP13.36□□□□□ -0.27
TMED3-201ENST00000299705 NBEAL1Q6ZS30 2694 aa13.36□□□□□ -0.27
TMED3-201ENST00000299705 A0A1W2PRE2 83 aa13.36□□□□□ -0.27
TMED3-201ENST00000299705 HLA-DMBP28068 263 aa13.36□□□□□ -0.27
TMED3-201ENST00000299705 APRG1Q8IVJ8 170 aa13.36□□□□□ -0.27
TMED3-201ENST00000299705 EXOC3-AS1Q8N2X6 119 aa13.36□□□□□ -0.27
TMED3-201ENST00000299705 Q9H3A6 140 aa13.36□□□□□ -0.27
TMED3-201ENST00000299705 PPT1P50897 306 aa13.35□□□□□ -0.27
TMED3-201ENST00000299705 ICAM4Q14773 271 aa13.35□□□□□ -0.27
TMED3-201ENST00000299705 DEFB125Q8N687 156 aa13.35□□□□□ -0.27
TMED3-201ENST00000299705 ARL6IP6Q8N6S5 226 aa13.35□□□□□ -0.27
TMED3-201ENST00000299705 WFDC10AQ9H1F0 79 aa13.35□□□□□ -0.27
TMED3-201ENST00000299705 OTORQ9NRC9 128 aa13.35□□□□□ -0.27
TMED3-201ENST00000299705 ARL2-SNX15V9GYD0 113 aa13.35□□□□□ -0.27
TMED3-201ENST00000299705 NOTCH1P46531 2555 aa13.35□□□□□ -0.27
TMED3-201ENST00000299705 A8MZ25 164 aa13.34□□□□□ -0.27
TMED3-201ENST00000299705 PRB2P02812 416 aaPredicted RBP13.34□□□□□ -0.27
TMED3-201ENST00000299705 PMS2P11Q13670 270 aa13.34□□□□□ -0.27
TMED3-201ENST00000299705 FOXI2Q6ZQN5 318 aa13.34□□□□□ -0.27
TMED3-201ENST00000299705 ZNF738Q8NE65 137 aa13.34□□□□□ -0.27
TMED3-201ENST00000299705 LYPD6BQ8NI32 183 aa13.34□□□□□ -0.27
TMED3-201ENST00000299705 CITED4Q96RK1 184 aa13.34□□□□□ -0.27
TMED3-201ENST00000299705 NKX6-2Q9C056 277 aaPredicted RBP13.34□□□□□ -0.27
TMED3-201ENST00000299705 K7EIL1 84 aa13.33□□□□□ -0.28
TMED3-201ENST00000299705 ZNF124Q15973 351 aa13.33□□□□□ -0.28
TMED3-201ENST00000299705 RPUSD4Q96CM3 377 aaKnown RBP13.33□□□□□ -0.28
TMED3-201ENST00000299705 A0A1B0GV50 99 aa13.32□□□□□ -0.28
TMED3-201ENST00000299705 PGPA6NDG6 321 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms